RNA–Protein interactions for RNA: ENST00000451686.5

ITSN1-220, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 501 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-220ENST00000451686 TINCRA0A1B0GVN0 87 aa13.53□□□□□ -0.24
ITSN1-220ENST00000451686 SMCO4Q9NRQ5 59 aa13.53□□□□□ -0.24
ITSN1-220ENST00000451686 SMIM1B2RUZ4 78 aa13.52□□□□□ -0.25
ITSN1-220ENST00000451686 GEMIN7Q9H840 131 aaKnown RBP13.52□□□□□ -0.25
ITSN1-220ENST00000451686 NDUFC2-KCTD14E9PQ53 114 aa13.51□□□□□ -0.25
ITSN1-220ENST00000451686 SRSF9Q13242 221 aaKnown RBP eCLIP13.51□□□□□ -0.25
ITSN1-220ENST00000451686 PMVKQ15126 192 aa13.51□□□□□ -0.25
ITSN1-220ENST00000451686 TNXBP22105 4242 aa13.51□□□□□ -0.25
ITSN1-220ENST00000451686 FAM168BA1KXE4 195 aa13.5□□□□□ -0.25
ITSN1-220ENST00000451686 LINC00614P0C842 121 aa13.49□□□□□ -0.25
ITSN1-220ENST00000451686 PHF5AQ7RTV0 110 aaKnown RBP13.49□□□□□ -0.25
ITSN1-220ENST00000451686 PDZD11Q5EBL8 140 aa13.48□□□□□ -0.25
ITSN1-220ENST00000451686 C9orf129Q5T035 196 aaKnown RBP13.48□□□□□ -0.25
ITSN1-220ENST00000451686 LINC00469Q8N7U9 141 aa13.48□□□□□ -0.25
ITSN1-220ENST00000451686 PACRGQ96M98 296 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-220ENST00000451686 TOMM7Q9P0U1 55 aa13.48□□□□□ -0.25
ITSN1-220ENST00000451686 PRSS2P07478 247 aa13.47□□□□□ -0.25
ITSN1-220ENST00000451686 KRTAP11-1Q8IUC1 163 aa13.47□□□□□ -0.25
ITSN1-220ENST00000451686 PSORS1C2Q9UIG4 136 aa13.47□□□□□ -0.25
ITSN1-220ENST00000451686 HBDP02042 147 aa13.46□□□□□ -0.25
ITSN1-220ENST00000451686 GAGE2EQ4V326 116 aa13.46□□□□□ -0.25
ITSN1-220ENST00000451686 SPINK6Q6UWN8 80 aa13.46□□□□□ -0.25
ITSN1-220ENST00000451686 GAGE2DQ9UEU5 116 aa13.46□□□□□ -0.25
ITSN1-220ENST00000451686 HMCN2Q8NDA2 5059 aa13.45□□□□□ -0.26
ITSN1-220ENST00000451686 F8VRH5 84 aa13.45□□□□□ -0.26
ITSN1-220ENST00000451686 IGLC3P0DOY3 106 aa13.45□□□□□ -0.26
ITSN1-220ENST00000451686 CXCL5P42830 114 aa13.45□□□□□ -0.26
ITSN1-220ENST00000451686 CKS1BP61024 79 aa13.45□□□□□ -0.26
ITSN1-220ENST00000451686 C6orf226Q5I0X4 101 aa13.45□□□□□ -0.26
ITSN1-220ENST00000451686 PMCHL1Q16048 86 aa13.43□□□□□ -0.26
ITSN1-220ENST00000451686 CBLN2Q8IUK8 224 aa13.43□□□□□ -0.26
ITSN1-220ENST00000451686 ODF1Q14990 250 aa13.42□□□□□ -0.26
ITSN1-220ENST00000451686 FAM19A5Q7Z5A7 132 aaPredicted RBP13.42□□□□□ -0.26
ITSN1-220ENST00000451686 LINC01600Q96MT4 127 aa13.42□□□□□ -0.26
ITSN1-220ENST00000451686 IGLV5-39A0A0G2JS06 123 aa13.41□□□□□ -0.26
ITSN1-220ENST00000451686 RAB5BP61020 215 aa13.41□□□□□ -0.26
ITSN1-220ENST00000451686 COX7B2Q8TF08 81 aa13.41□□□□□ -0.26
ITSN1-220ENST00000451686 SPINK8P0C7L1 97 aa13.4□□□□□ -0.26
ITSN1-220ENST00000451686 ZNF22P17026 224 aaPredicted RBP13.39□□□□□ -0.27
ITSN1-220ENST00000451686 M0QXV9 152 aa13.38□□□□□ -0.27
ITSN1-220ENST00000451686 ATP5LO75964 103 aa13.38□□□□□ -0.27
ITSN1-220ENST00000451686 SERTAD4-AS1Q5TG53 156 aa13.38□□□□□ -0.27
ITSN1-220ENST00000451686 SLC7A5P1Q8MH63 180 aa13.38□□□□□ -0.27
ITSN1-220ENST00000451686 CHCHD1Q96BP2 118 aaKnown RBP13.37□□□□□ -0.27
ITSN1-220ENST00000451686 H3BRM9 83 aa13.35□□□□□ -0.27
ITSN1-220ENST00000451686 C1orf137Q5JT78 98 aa13.35□□□□□ -0.27
ITSN1-220ENST00000451686 XAGE1AQ9HD64 81 aa13.35□□□□□ -0.27
ITSN1-220ENST00000451686 C11orf86A6NJI1 115 aa13.34□□□□□ -0.27
ITSN1-220ENST00000451686 IGLV7-43P04211 117 aa13.33□□□□□ -0.28
ITSN1-220ENST00000451686 KRTAP10-8P60410 259 aa13.33□□□□□ -0.28
ITSN1-220ENST00000451686 REG3GQ6UW15 175 aa13.33□□□□□ -0.28
ITSN1-220ENST00000451686 LINC00310P59036 64 aa13.32□□□□□ -0.28
ITSN1-220ENST00000451686 BAGE3Q86Y29 109 aa13.32□□□□□ -0.28
ITSN1-220ENST00000451686 NDUFA6P56556 154 aa13.31□□□□□ -0.28
ITSN1-220ENST00000451686 TRGC2P03986 189 aa13.3□□□□□ -0.28
ITSN1-220ENST00000451686 TP73-AS1Q9UF72 201 aa13.3□□□□□ -0.28
ITSN1-220ENST00000451686 PLA2G2DQ9UNK4 145 aa13.3□□□□□ -0.28
ITSN1-220ENST00000451686 C22orf24Q9Y442 160 aa13.3□□□□□ -0.28
ITSN1-220ENST00000451686 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
ITSN1-220ENST00000451686 IFI27L1Q96BM0 104 aa13.28□□□□□ -0.28
ITSN1-220ENST00000451686 COLCA2A8K830 154 aa13.27□□□□□ -0.29
ITSN1-220ENST00000451686 IGLV5-37A0A075B6J1 123 aa13.26□□□□□ -0.29
ITSN1-220ENST00000451686 UBE2BP63146 152 aa13.26□□□□□ -0.29
ITSN1-220ENST00000451686 CHTOPQ9Y3Y2 248 aaKnown RBP13.26□□□□□ -0.29
ITSN1-220ENST00000451686 H0Y9J4 135 aa13.24□□□□□ -0.29
ITSN1-220ENST00000451686 HSBP1O75506 76 aa13.24□□□□□ -0.29
ITSN1-220ENST00000451686 FAM19A2Q8N3H0 131 aa13.24□□□□□ -0.29
ITSN1-220ENST00000451686 DIRC1Q969H9 104 aa13.24□□□□□ -0.29
ITSN1-220ENST00000451686 ZNF625Q96I27 306 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-220ENST00000451686 TMEM170BQ5T4T1 132 aa13.23□□□□□ -0.29
ITSN1-220ENST00000451686 MRPL55Q7Z7F7 128 aaKnown RBP13.23□□□□□ -0.29
ITSN1-220ENST00000451686 TMEM223A0PJW6 202 aa13.22□□□□□ -0.29
ITSN1-220ENST00000451686 LBHQ53QV2 105 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-220ENST00000451686 SERF1AO75920 110 aa13.21□□□□□ -0.29
ITSN1-220ENST00000451686 KRTAP1-4P0C5Y4 121 aa13.21□□□□□ -0.29
ITSN1-220ENST00000451686 ERG28Q9UKR5 140 aa13.21□□□□□ -0.29
ITSN1-220ENST00000451686 NUPR1O60356 82 aa13.2□□□□□ -0.3
ITSN1-220ENST00000451686 COX17Q14061 63 aa13.2□□□□□ -0.3
ITSN1-220ENST00000451686 SFTA2Q6UW10 78 aa13.2□□□□□ -0.3
ITSN1-220ENST00000451686 LINC00167Q96N53 147 aa13.18□□□□□ -0.3
ITSN1-220ENST00000451686 SND1-IT1Q9HBX3 110 aa13.18□□□□□ -0.3
ITSN1-220ENST00000451686 PFN2P35080 140 aa13.17□□□□□ -0.3
ITSN1-220ENST00000451686 ZNF861PO60384 105 aa13.16□□□□□ -0.3
ITSN1-220ENST00000451686 VPREB1P12018 145 aa13.16□□□□□ -0.3
ITSN1-220ENST00000451686 Q8NDZ9 215 aa13.15□□□□□ -0.3
ITSN1-220ENST00000451686 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
ITSN1-220ENST00000451686 BCE1O60756 84 aa13.13□□□□□ -0.31
ITSN1-220ENST00000451686 KRTAP13-1Q8IUC0 172 aa13.12□□□□□ -0.31
ITSN1-220ENST00000451686 RPL37AP8A6NKH3 93 aa13.11□□□□□ -0.31
ITSN1-220ENST00000451686 SCO1O75880 301 aa13.11□□□□□ -0.31
ITSN1-220ENST00000451686 PRR26Q8N8Z3 221 aa13.11□□□□□ -0.31
ITSN1-220ENST00000451686 LRP2P98164 4655 aa13.1□□□□□ -0.31
ITSN1-220ENST00000451686 IGLV1-50A0A075B6I6 118 aa13.09□□□□□ -0.31
ITSN1-220ENST00000451686 GAGE10A6NGK3 116 aa13.09□□□□□ -0.31
ITSN1-220ENST00000451686 NKAPP1Q8N9T2 125 aa13.09□□□□□ -0.31
ITSN1-220ENST00000451686 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
ITSN1-220ENST00000451686 HIST1H2BKO60814 126 aa13.06□□□□□ -0.32
ITSN1-220ENST00000451686 HIST1H2BJP06899 126 aa13.06□□□□□ -0.32
ITSN1-220ENST00000451686 HIST1H2BOP23527 126 aa13.06□□□□□ -0.32
ITSN1-220ENST00000451686 HIST1H2BBP33778 126 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms