RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 SMIM1B2RUZ4 78 aa4.52□□□□□ -1.69
USP46-202ENST00000451218 LCE2BO14633 110 aa4.52□□□□□ -1.69
USP46-202ENST00000451218 HERV-K104P63124 156 aa4.52□□□□□ -1.69
USP46-202ENST00000451218 COL5A1-AS1Q5SY13 56 aa4.52□□□□□ -1.69
USP46-202ENST00000451218 IGKV3OR2-268A0A0C4DH90 116 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 K7ERJ3 54 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 HSD52Q0P140 79 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 ORAOV1Q8WV07 137 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 ZNF625Q96I27 306 aaPredicted RBP4.51□□□□□ -1.69
USP46-202ENST00000451218 SPANXB1Q9NS25 103 aaPredicted RBP4.51□□□□□ -1.69
USP46-202ENST00000451218 LINC00474Q9P2X8 69 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 IGHV3-30-3P0DP02 117 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 GAGE4Q13068 117 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 GAGE5Q13069 117 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 ATXN8Q156A1 80 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 TAL2Q16559 108 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 GAGE13Q4V321 117 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 CDKN2A-AS1Q9UH64 79 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 C12orf74Q32Q52 190 aa4.51□□□□□ -1.69
USP46-202ENST00000451218 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 F8WDY8 70 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 LEPROTO15243 131 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 NUPR2A6NF83 97 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 LYRM9A8MSI8 78 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 LINC00158P58513 81 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 CXCL5P42830 114 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 TMEM258P61165 79 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 V9GYY9 64 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 IGHV3OR16-9A0A0B4J2B5 98 aa4.5□□□□□ -1.69
USP46-202ENST00000451218 FABP2P12104 132 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 A0A096LPF7 62 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 IGHV1-58A0A0C4DH39 117 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 H7C423 109 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 PAX4O43316 350 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 MIFP14174 115 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 J3QQQ9 107 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 PLA2G1BP04054 148 aaKnown RBP4.49□□□□□ -1.69
USP46-202ENST00000451218 TMEM170BQ5T4T1 132 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 ZFAND6Q6FIF0 208 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 SOSTDC1Q6X4U4 206 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 ATP6V0E2Q8NHE4 81 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 SS18L2Q9UHA2 77 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 LAMTOR3Q9UHA4 124 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 ETDCA0A1B0GVM5 59 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 K7EIL1 84 aa4.49□□□□□ -1.69
USP46-202ENST00000451218 FUSP35637 526 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP46-202ENST00000451218 A0A1B0GV72 72 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 K7ERU9 68 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 HIST1H4GQ99525 98 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 SACSQ9NZJ4 4579 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 SMIM13P0DJ93 91 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 UBE2AP49459 152 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 PRO0461Q9UI25 63 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 TRAV26-1A0A087WT03 109 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 A0A1B0GUV1 79 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 TM2D3Q9BRN9 247 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 TMEM243Q9BU79 118 aa4.48□□□□□ -1.69
USP46-202ENST00000451218 C9orf118A6NHY6 69 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 USP17L23D6RBM5 183 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 CHKB-CPT1BH3BT56 60 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 CFC1BP0CG36 223 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 CFC1P0CG37 223 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 SPINK8P0C7L1 97 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 DEFB130BP0DP73 79 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 DEFB130AP0DP74 79 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 IGHV3-64A0A075B6Q5 118 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 KIAA0087Q14695 138 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 Q8NDZ9 215 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 PRR34Q9NV39 138 aa4.47□□□□□ -1.69
USP46-202ENST00000451218 NAA38Q9BRA0 125 aaKnown RBP4.46□□□□□ -1.69
USP46-202ENST00000451218 PRO0255Q9UI72 69 aa4.46□□□□□ -1.69
USP46-202ENST00000451218 NDUFA1O15239 70 aa4.46□□□□□ -1.7
USP46-202ENST00000451218 XCL1P47992 114 aa4.45□□□□□ -1.7
USP46-202ENST00000451218 PDE6GP18545 87 aa4.45□□□□□ -1.7
USP46-202ENST00000451218 TRAV10A0A0B4J240 114 aa4.45□□□□□ -1.7
USP46-202ENST00000451218 IGLL5B9A064 214 aa4.45□□□□□ -1.7
USP46-202ENST00000451218 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
USP46-202ENST00000451218 A0A1W2PPM0 123 aa4.45□□□□□ -1.7
USP46-202ENST00000451218 IGKV2D-24A0A075B6R9 120 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 A0A087WZ39 114 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 LOC107984156A0A0G2JMH3 177 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 FOXI1Q12951 378 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 ENHOQ6UWT2 76 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 Q6ZTC4 211 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 ARL17AQ8IVW1 177 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 PPDPFQ9H3Y8 114 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 STAB2Q8WWQ8 2551 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 MP68P56378 58 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 PRB2P02812 416 aaPredicted RBP4.44□□□□□ -1.7
USP46-202ENST00000451218 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 H3BNG1 76 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 GAGE6Q13070 117 aa4.44□□□□□ -1.7
USP46-202ENST00000451218 M0QXV9 152 aa4.43□□□□□ -1.7
USP46-202ENST00000451218 TIMM17BO60830 172 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms