RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 C1orf137Q5JT78 98 aa1.57□□□□□ -2.16
USP53-202ENST00000450251 UQCR11O14957 56 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 IGHV4-38-2P0DP08 117 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 KLK9Q2XQG4 91 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 IGFL2Q6UWQ7 119 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 Q6ZTC4 211 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 LINC01356Q8N9X3 169 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 PRO0255Q9UI72 69 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 SETXQ7Z333 2677 aaKnown RBP1.56□□□□□ -2.16
USP53-202ENST00000450251 UBR5O95071 2799 aaPredicted RBP1.56□□□□□ -2.16
USP53-202ENST00000450251 C2CD3Q4AC94 2353 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 LRCOL1A6NCL2 159 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 PRB1P04280 392 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 IGHV4-31P0DP07 118 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 EGFEM1PQ0D2K5 195 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 C14orf177Q52M58 125 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 RUSC1-AS1Q66K80 236 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 Q6ZSV7 163 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 MED12LQ86YW9 2145 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 A0A1B0GUV1 79 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 KPRPQ5T749 579 aaPredicted RBP1.56□□□□□ -2.16
USP53-202ENST00000450251 FP248Q71RG6 208 aaPredicted RBP1.56□□□□□ -2.16
USP53-202ENST00000450251 COA5Q86WW8 74 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 WFDC13Q8IUB5 93 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 LINC00588Q9Y4M8 146 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 STAB1Q9NY15 2570 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 ARID1BQ8NFD5 2236 aaPredicted RBP1.56□□□□□ -2.16
USP53-202ENST00000450251 MAP6D1Q9H9H5 199 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 CHD9Q3L8U1 2897 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 COX6A2Q02221 97 aa1.56□□□□□ -2.16
USP53-202ENST00000450251 PCNX1Q96RV3 2341 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 PTPRBP23467 1997 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 SNRNP200O75643 2136 aaKnown RBP1.55□□□□□ -2.16
USP53-202ENST00000450251 ARID1AO14497 2285 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 IGHV3OR16-9A0A0B4J2B5 98 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 A6NDX4 124 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 MOBPQ13875 183 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 LINC01560Q8TB33 94 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 LY6G6EA0A0G2JKS1 128 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 DEFB130BP0DP73 79 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 DEFB130AP0DP74 79 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 LINC00315P59091 139 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 PRR4Q16378 134 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 UNQ9165/PRO28630Q6UXU0 137 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 SEM1Q6ZVN7 128 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 U3KQA8 63 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 HIVEP3Q5T1R4 2406 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 ZNF702PQ9H963 129 aa1.55□□□□□ -2.16
USP53-202ENST00000450251 ARHGEF17Q96PE2 2063 aaPredicted RBP1.54□□□□□ -2.16
USP53-202ENST00000450251 CLPSL2Q6UWE3 100 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 DEFB124Q8NES8 71 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 FAM215AQ9Y5M1 114 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 LYNX1G3V0Z9 82 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 LYNX1P0DP58 116 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 HTN3P15516 51 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 Q8NBF4 154 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 SETD2Q9BYW2 2564 aaPredicted RBP1.54□□□□□ -2.16
USP53-202ENST00000450251 SMG1Q96Q15 3661 aaKnown RBP1.54□□□□□ -2.16
USP53-202ENST00000450251 GVQW2A0A096LPI5 108 aaPredicted RBP1.54□□□□□ -2.16
USP53-202ENST00000450251 SPART-AS1P0CW21 52 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 KIAA0087Q14695 138 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 LELP1Q5T871 98 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 ATP1A1-AS1Q5TC04 95 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 DEFB123Q8N688 67 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 LINC01558Q9Y6Z2 57 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 SRCAPQ6ZRS2 3230 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 IGKV2-28A0A075B6P5 120 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 F8W735 103 aaPredicted RBP1.54□□□□□ -2.16
USP53-202ENST00000450251 IGKV2D-28P01615 120 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 OCR1Q9BZK8 76 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 C16orf95Q9H693 158 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 C6orf48Q9UBA6 75 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 CABIN1Q9Y6J0 2220 aa1.54□□□□□ -2.16
USP53-202ENST00000450251 IGKV2D-24A0A075B6R9 120 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 OXTP01178 125 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 IGLV1-40P01703 118 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 FBXL19-AS1Q494R0 122 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 BBC3Q96PG8 261 aaPredicted RBP1.53□□□□□ -2.16
USP53-202ENST00000450251 GOLGA4Q13439 2230 aaKnown RBP1.53□□□□□ -2.16
USP53-202ENST00000450251 IGLV6-57P01721 117 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 MIR22HGQ0VDD5 57 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 DYSFO75923 2080 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 DEFB131BA0A096LNP1 70 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 PATE3B3GLJ2 98 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 KCNQ1DNQ9H478 68 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 SPAG17Q6Q759 2223 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 FLNCQ14315 2725 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.53□□□□□ -2.16
USP53-202ENST00000450251 DNAJC9-AS1A6NH13 148 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 Q6ZTI0 123 aa1.53□□□□□ -2.16
USP53-202ENST00000450251 NOTCH4Q99466 2003 aa1.53□□□□□ -2.17
USP53-202ENST00000450251 IGHV4-30-2A0A087WSY4 118 aa1.53□□□□□ -2.17
USP53-202ENST00000450251 REG3GQ6UW15 175 aa1.53□□□□□ -2.17
USP53-202ENST00000450251 BRD3OSQ6XYD6 125 aa1.53□□□□□ -2.17
USP53-202ENST00000450251 Q6ZRP5 223 aa1.53□□□□□ -2.17
USP53-202ENST00000450251 TET2Q6N021 2002 aaPredicted RBP1.52□□□□□ -2.17
USP53-202ENST00000450251 HECTD1Q9ULT8 2610 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 TET1Q8NFU7 2136 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 DSCAMO60469 2012 aa1.52□□□□□ -2.17
USP53-202ENST00000450251 IGLV10-54A0A075B6I4 117 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms