RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 GEMIN7Q9H840 131 aaKnown RBP10.24□□□□□ -0.77
RAB11FIP3-204ENST00000449879 TRGC2P03986 189 aa10.23□□□□□ -0.77
RAB11FIP3-204ENST00000449879 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
RAB11FIP3-204ENST00000449879 PMCHL1Q16048 86 aa10.23□□□□□ -0.77
RAB11FIP3-204ENST00000449879 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
RAB11FIP3-204ENST00000449879 NDUFA1O15239 70 aa10.22□□□□□ -0.77
RAB11FIP3-204ENST00000449879 PMVKQ15126 192 aa10.22□□□□□ -0.77
RAB11FIP3-204ENST00000449879 CHCHD1Q96BP2 118 aaKnown RBP10.22□□□□□ -0.77
RAB11FIP3-204ENST00000449879 CST9LQ9H4G1 147 aa10.22□□□□□ -0.77
RAB11FIP3-204ENST00000449879 TINCRA0A1B0GVN0 87 aa10.21□□□□□ -0.77
RAB11FIP3-204ENST00000449879 COLCA2A8K830 154 aa10.21□□□□□ -0.77
RAB11FIP3-204ENST00000449879 PDZD11Q5EBL8 140 aa10.21□□□□□ -0.77
RAB11FIP3-204ENST00000449879 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.77
RAB11FIP3-204ENST00000449879 CDKN2A-AS1Q9UH64 79 aa10.21□□□□□ -0.77
RAB11FIP3-204ENST00000449879 RNF151Q2KHN1 245 aa10.2□□□□□ -0.78
RAB11FIP3-204ENST00000449879 LINC00469Q8N7U9 141 aa10.2□□□□□ -0.78
RAB11FIP3-204ENST00000449879 PACRGQ96M98 296 aaPredicted RBP10.2□□□□□ -0.78
RAB11FIP3-204ENST00000449879 PSORS1C2Q9UIG4 136 aa10.2□□□□□ -0.78
RAB11FIP3-204ENST00000449879 LRP2P98164 4655 aa10.19□□□□□ -0.78
RAB11FIP3-204ENST00000449879 ATP5LO75964 103 aa10.19□□□□□ -0.78
RAB11FIP3-204ENST00000449879 KIAA0087Q14695 138 aa10.19□□□□□ -0.78
RAB11FIP3-204ENST00000449879 PHF5AQ7RTV0 110 aaKnown RBP10.19□□□□□ -0.78
RAB11FIP3-204ENST00000449879 BAGE3Q86Y29 109 aa10.19□□□□□ -0.78
RAB11FIP3-204ENST00000449879 PRSS2P07478 247 aa10.18□□□□□ -0.78
RAB11FIP3-204ENST00000449879 NDUFA6P56556 154 aa10.18□□□□□ -0.78
RAB11FIP3-204ENST00000449879 TOMM7Q9P0U1 55 aa10.18□□□□□ -0.78
RAB11FIP3-204ENST00000449879 IGLV5-45A0A087WSX0 123 aa10.17□□□□□ -0.78
RAB11FIP3-204ENST00000449879 C1orf137Q5JT78 98 aa10.17□□□□□ -0.78
RAB11FIP3-204ENST00000449879 C10orf25Q5T742 122 aa10.17□□□□□ -0.78
RAB11FIP3-204ENST00000449879 UNQ6190/PRO20217Q6UXQ8 127 aa10.17□□□□□ -0.78
RAB11FIP3-204ENST00000449879 Q8IZM0 81 aa10.17□□□□□ -0.78
RAB11FIP3-204ENST00000449879 HSBP1O75506 76 aa10.16□□□□□ -0.78
RAB11FIP3-204ENST00000449879 SCO1O75880 301 aa10.16□□□□□ -0.78
RAB11FIP3-204ENST00000449879 TRBV30A0A0K0K1B3 111 aa10.15□□□□□ -0.78
RAB11FIP3-204ENST00000449879 SMIM1B2RUZ4 78 aa10.15□□□□□ -0.78
RAB11FIP3-204ENST00000449879 IGLC3P0DOY3 106 aa10.15□□□□□ -0.78
RAB11FIP3-204ENST00000449879 CKS1BP61024 79 aa10.15□□□□□ -0.78
RAB11FIP3-204ENST00000449879 C6orf226Q5I0X4 101 aa10.15□□□□□ -0.78
RAB11FIP3-204ENST00000449879 C2orf82Q6UX34 121 aa10.15□□□□□ -0.78
RAB11FIP3-204ENST00000449879 C6orf48Q9UBA6 75 aa10.15□□□□□ -0.78
RAB11FIP3-204ENST00000449879 H3BRM9 83 aa10.14□□□□□ -0.79
RAB11FIP3-204ENST00000449879 FAM168BA1KXE4 195 aa10.13□□□□□ -0.79
RAB11FIP3-204ENST00000449879 TLX1NBP0CAT3 122 aa10.13□□□□□ -0.79
RAB11FIP3-204ENST00000449879 SERF1AO75920 110 aa10.12□□□□□ -0.79
RAB11FIP3-204ENST00000449879 SPINK8P0C7L1 97 aa10.12□□□□□ -0.79
RAB11FIP3-204ENST00000449879 CXCL5P42830 114 aa10.12□□□□□ -0.79
RAB11FIP3-204ENST00000449879 GAGE2EQ4V326 116 aa10.12□□□□□ -0.79
RAB11FIP3-204ENST00000449879 FAM19A2Q8N3H0 131 aa10.12□□□□□ -0.79
RAB11FIP3-204ENST00000449879 IFI27L1Q96BM0 104 aa10.12□□□□□ -0.79
RAB11FIP3-204ENST00000449879 GAGE2DQ9UEU5 116 aa10.12□□□□□ -0.79
RAB11FIP3-204ENST00000449879 LINC00310P59036 64 aa10.11□□□□□ -0.79
RAB11FIP3-204ENST00000449879 COX7B2Q8TF08 81 aa10.11□□□□□ -0.79
RAB11FIP3-204ENST00000449879 F8VRH5 84 aa10.1□□□□□ -0.79
RAB11FIP3-204ENST00000449879 IGLV7-43P04211 117 aa10.1□□□□□ -0.79
RAB11FIP3-204ENST00000449879 ZNF22P17026 224 aaPredicted RBP10.1□□□□□ -0.79
RAB11FIP3-204ENST00000449879 FAM19A5Q7Z5A7 132 aaPredicted RBP10.1□□□□□ -0.79
RAB11FIP3-204ENST00000449879 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
RAB11FIP3-204ENST00000449879 TRAV12-1A0A0B4J245 112 aa10.09□□□□□ -0.79
RAB11FIP3-204ENST00000449879 NDUFC2-KCTD14E9PQ53 114 aa10.09□□□□□ -0.79
RAB11FIP3-204ENST00000449879 DIRC1Q969H9 104 aa10.09□□□□□ -0.79
RAB11FIP3-204ENST00000449879 CHTOPQ9Y3Y2 248 aaKnown RBP10.09□□□□□ -0.79
RAB11FIP3-204ENST00000449879 C11orf86A6NJI1 115 aa10.08□□□□□ -0.8
RAB11FIP3-204ENST00000449879 PRR26Q8N8Z3 221 aa10.08□□□□□ -0.8
RAB11FIP3-204ENST00000449879 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
RAB11FIP3-204ENST00000449879 TMEM170BQ5T4T1 132 aa10.07□□□□□ -0.8
RAB11FIP3-204ENST00000449879 IGLV5-39A0A0G2JS06 123 aa10.06□□□□□ -0.8
RAB11FIP3-204ENST00000449879 RNF213Q63HN8 5207 aa10.06□□□□□ -0.8
RAB11FIP3-204ENST00000449879 NUPR1O60356 82 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 KRTAP7-1Q8IUC3 87 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 HSPB8Q9UJY1 196 aa10.05□□□□□ -0.8
RAB11FIP3-204ENST00000449879 H0Y8G0 127 aa10.04□□□□□ -0.8
RAB11FIP3-204ENST00000449879 H0Y9J4 135 aa10.04□□□□□ -0.8
RAB11FIP3-204ENST00000449879 M0QXV9 152 aa10.04□□□□□ -0.8
RAB11FIP3-204ENST00000449879 UBE2BP63146 152 aa10.04□□□□□ -0.8
RAB11FIP3-204ENST00000449879 S100A1P23297 94 aa10.03□□□□□ -0.8
RAB11FIP3-204ENST00000449879 FABP4P15090 132 aa10.02□□□□□ -0.81
RAB11FIP3-204ENST00000449879 C9orf129Q5T035 196 aaKnown RBP10.01□□□□□ -0.81
RAB11FIP3-204ENST00000449879 TMEM223A0PJW6 202 aa10□□□□□ -0.81
RAB11FIP3-204ENST00000449879 ATP6V1G1O75348 118 aa10□□□□□ -0.81
RAB11FIP3-204ENST00000449879 SFTA2Q6UW10 78 aa9.99□□□□□ -0.81
RAB11FIP3-204ENST00000449879 IGLV1-50A0A075B6I6 118 aa9.98□□□□□ -0.81
RAB11FIP3-204ENST00000449879 PLNP26678 52 aa9.98□□□□□ -0.81
RAB11FIP3-204ENST00000449879 XAGE1AQ9HD64 81 aa9.98□□□□□ -0.81
RAB11FIP3-204ENST00000449879 KRTAP1-4P0C5Y4 121 aa9.97□□□□□ -0.81
RAB11FIP3-204ENST00000449879 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
RAB11FIP3-204ENST00000449879 DPM2O94777 84 aa9.95□□□□□ -0.82
RAB11FIP3-204ENST00000449879 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
RAB11FIP3-204ENST00000449879 ERG28Q9UKR5 140 aa9.95□□□□□ -0.82
RAB11FIP3-204ENST00000449879 LPAP08519 4548 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms