RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 LINC01561Q8N1V8 128 aa7.24□□□□□ -1.25
SCN10A-201ENST00000449082 ATP5EP56381 51 aaPredicted RBP7.24□□□□□ -1.25
SCN10A-201ENST00000449082 MPLKIPQ8TAP9 179 aa7.23□□□□□ -1.25
SCN10A-201ENST00000449082 Q6JHZ5 121 aa7.23□□□□□ -1.25
SCN10A-201ENST00000449082 BRK1Q8WUW1 75 aa7.23□□□□□ -1.25
SCN10A-201ENST00000449082 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
SCN10A-201ENST00000449082 SERP1Q9Y6X1 66 aa7.23□□□□□ -1.25
SCN10A-201ENST00000449082 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
SCN10A-201ENST00000449082 PRYO14603 147 aa7.22□□□□□ -1.25
SCN10A-201ENST00000449082 V9GYY9 64 aa7.22□□□□□ -1.25
SCN10A-201ENST00000449082 SPTSSBQ8NFR3 76 aa7.22□□□□□ -1.25
SCN10A-201ENST00000449082 PRR3P79522 188 aaKnown RBP7.21□□□□□ -1.25
SCN10A-201ENST00000449082 FAM30AQ9NZY2 134 aa7.21□□□□□ -1.26
SCN10A-201ENST00000449082 SVIPQ8NHG7 77 aa7.2□□□□□ -1.26
SCN10A-201ENST00000449082 Q9BRP9 147 aa7.2□□□□□ -1.26
SCN10A-201ENST00000449082 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
SCN10A-201ENST00000449082 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
SCN10A-201ENST00000449082 ESRGQ1W209 222 aa7.2□□□□□ -1.26
SCN10A-201ENST00000449082 Q6ZVQ6 151 aa7.19□□□□□ -1.26
SCN10A-201ENST00000449082 LINC00310P59036 64 aa7.18□□□□□ -1.26
SCN10A-201ENST00000449082 C2CD3Q4AC94 2353 aa7.18□□□□□ -1.26
SCN10A-201ENST00000449082 ADAMTSL4-AS1Q5T5F5 129 aa7.18□□□□□ -1.26
SCN10A-201ENST00000449082 A0A087WYN8 130 aa7.18□□□□□ -1.26
SCN10A-201ENST00000449082 CELA1Q9UNI1 258 aa7.18□□□□□ -1.26
SCN10A-201ENST00000449082 Q6ZRU5 148 aa7.18□□□□□ -1.26
SCN10A-201ENST00000449082 TLN1Q9Y490 2541 aaKnown RBP7.18□□□□□ -1.26
SCN10A-201ENST00000449082 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
SCN10A-201ENST00000449082 FAM240AA0A1B0GVK7 77 aa7.17□□□□□ -1.26
SCN10A-201ENST00000449082 C11orf72Q8NBR9 251 aa7.17□□□□□ -1.26
SCN10A-201ENST00000449082 MDFIQ99750 246 aa7.16□□□□□ -1.26
SCN10A-201ENST00000449082 PRR4Q16378 134 aa7.15□□□□□ -1.26
SCN10A-201ENST00000449082 AGRNO00468 2067 aa7.15□□□□□ -1.26
SCN10A-201ENST00000449082 COX7CP15954 63 aa7.15□□□□□ -1.27
SCN10A-201ENST00000449082 LIMD2Q9BT23 127 aa7.14□□□□□ -1.27
SCN10A-201ENST00000449082 MYO9AB2RTY4 2548 aa7.14□□□□□ -1.27
SCN10A-201ENST00000449082 COL4A2P08572 1712 aa7.14□□□□□ -1.27
SCN10A-201ENST00000449082 KIF25-AS1Q9Y6Z4 181 aa7.14□□□□□ -1.27
SCN10A-201ENST00000449082 TET2Q6N021 2002 aaPredicted RBP7.13□□□□□ -1.27
SCN10A-201ENST00000449082 A0A096LNJ9 63 aa7.13□□□□□ -1.27
SCN10A-201ENST00000449082 C22orf24Q9Y442 160 aa7.13□□□□□ -1.27
SCN10A-201ENST00000449082 A0A087WSZ3 146 aa7.12□□□□□ -1.27
SCN10A-201ENST00000449082 KRTAP24-1Q3LI83 254 aa7.12□□□□□ -1.27
SCN10A-201ENST00000449082 LINC00575Q6W349 94 aa7.12□□□□□ -1.27
SCN10A-201ENST00000449082 LINC00208Q96KT6 92 aa7.12□□□□□ -1.27
SCN10A-201ENST00000449082 TRAV7A0A075B6U4 112 aa7.12□□□□□ -1.27
SCN10A-201ENST00000449082 H3BNG1 76 aa7.12□□□□□ -1.27
SCN10A-201ENST00000449082 PRLHP81277 87 aa7.11□□□□□ -1.27
SCN10A-201ENST00000449082 XGP55808 180 aa7.11□□□□□ -1.27
SCN10A-201ENST00000449082 LINC01547P58512 204 aaPredicted RBP7.11□□□□□ -1.27
SCN10A-201ENST00000449082 FAM19A4Q96LR4 140 aa7.11□□□□□ -1.27
SCN10A-201ENST00000449082 SMCR5Q8TEV8 140 aa7.11□□□□□ -1.27
SCN10A-201ENST00000449082 A6NED7 52 aa7.1□□□□□ -1.27
SCN10A-201ENST00000449082 LRRK2Q5S007 2527 aa7.1□□□□□ -1.27
SCN10A-201ENST00000449082 SBSPONQ8IVN8 264 aa7.1□□□□□ -1.27
SCN10A-201ENST00000449082 JMJD1CQ15652 2540 aa7.1□□□□□ -1.27
SCN10A-201ENST00000449082 Q6Q795 121 aa7.1□□□□□ -1.27
SCN10A-201ENST00000449082 DOPEY1Q5JWR5 2465 aa7.09□□□□□ -1.27
SCN10A-201ENST00000449082 RETNLBQ9BQ08 111 aa7.09□□□□□ -1.27
SCN10A-201ENST00000449082 EP400Q96L91 3159 aa7.08□□□□□ -1.28
SCN10A-201ENST00000449082 ZFYVE26Q68DK2 2539 aa7.08□□□□□ -1.28
SCN10A-201ENST00000449082 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
SCN10A-201ENST00000449082 ABCA12Q86UK0 2595 aa7.08□□□□□ -1.28
SCN10A-201ENST00000449082 X6R8D5 127 aa7.08□□□□□ -1.28
SCN10A-201ENST00000449082 IGHV3OR16-9A0A0B4J2B5 98 aa7.07□□□□□ -1.28
SCN10A-201ENST00000449082 A8MTW9 85 aa7.07□□□□□ -1.28
SCN10A-201ENST00000449082 LINC00337Q8N6G1 96 aa7.07□□□□□ -1.28
SCN10A-201ENST00000449082 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
SCN10A-201ENST00000449082 TRBV7-6A0A0J9YX20 115 aa7.06□□□□□ -1.28
SCN10A-201ENST00000449082 Q8N3U1 123 aa7.06□□□□□ -1.28
SCN10A-201ENST00000449082 CCDC179H3BU77 68 aa7.06□□□□□ -1.28
SCN10A-201ENST00000449082 LINC00315P59091 139 aa7.06□□□□□ -1.28
SCN10A-201ENST00000449082 DEFB116Q30KQ4 102 aa7.06□□□□□ -1.28
SCN10A-201ENST00000449082 A0A087WVE0 104 aa7.05□□□□□ -1.28
SCN10A-201ENST00000449082 H0Y9P7 68 aa7.04□□□□□ -1.28
SCN10A-201ENST00000449082 LINC00167Q96N53 147 aa7.04□□□□□ -1.28
SCN10A-201ENST00000449082 COL27A1Q8IZC6 1860 aaPredicted RBP7.04□□□□□ -1.28
SCN10A-201ENST00000449082 PTPRBP23467 1997 aa7.04□□□□□ -1.28
SCN10A-201ENST00000449082 HCG22E2RYF7 251 aa7.04□□□□□ -1.28
SCN10A-201ENST00000449082 C6orf48Q9UBA6 75 aa7.04□□□□□ -1.28
SCN10A-201ENST00000449082 FN1P02751 2386 aaKnown RBP7.04□□□□□ -1.28
SCN10A-201ENST00000449082 PCOTHQ58A44 107 aa7.03□□□□□ -1.28
SCN10A-201ENST00000449082 NBDYA0A0U1RRE5 68 aa7.03□□□□□ -1.28
SCN10A-201ENST00000449082 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
SCN10A-201ENST00000449082 KIAA0087Q14695 138 aa7.03□□□□□ -1.28
SCN10A-201ENST00000449082 A0A0U1RQV1 116 aa7.02□□□□□ -1.29
SCN10A-201ENST00000449082 SMIM26A0A096LP01 95 aa7.01□□□□□ -1.29
SCN10A-201ENST00000449082 RTL8CO15255 209 aa7.01□□□□□ -1.29
SCN10A-201ENST00000449082 Q8NAQ8 132 aa7.01□□□□□ -1.29
SCN10A-201ENST00000449082 ANKRD11Q6UB99 2663 aaPredicted RBP7.01□□□□□ -1.29
SCN10A-201ENST00000449082 USP9XQ93008 2570 aaPredicted RBP7.01□□□□□ -1.29
SCN10A-201ENST00000449082 TRBV7-7A0A0K0K1E9 115 aa7.01□□□□□ -1.29
SCN10A-201ENST00000449082 MOBPQ13875 183 aa7□□□□□ -1.29
SCN10A-201ENST00000449082 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
SCN10A-201ENST00000449082 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
SCN10A-201ENST00000449082 SPINK1P00995 79 aa7□□□□□ -1.29
SCN10A-201ENST00000449082 TLN2Q9Y4G6 2542 aa7□□□□□ -1.29
SCN10A-201ENST00000449082 SPACA4Q8TDM5 124 aa7□□□□□ -1.29
SCN10A-201ENST00000449082 CXCL6P80162 114 aa6.99□□□□□ -1.29
SCN10A-201ENST00000449082 LINC00588Q9Y4M8 146 aa6.99□□□□□ -1.29
SCN10A-201ENST00000449082 LINC00846Q9NV44 126 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms