RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 DEFB112Q30KQ8 113 aa5.35□□□□□ -1.55
TRIM49C-201ENST00000448984 LINC00167Q96N53 147 aa5.35□□□□□ -1.55
TRIM49C-201ENST00000448984 SETD2Q9BYW2 2564 aaPredicted RBP5.34□□□□□ -1.55
TRIM49C-201ENST00000448984 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
TRIM49C-201ENST00000448984 A6NDX4 124 aa5.34□□□□□ -1.55
TRIM49C-201ENST00000448984 F6UB75 175 aa5.34□□□□□ -1.55
TRIM49C-201ENST00000448984 LECT2O14960 151 aa5.34□□□□□ -1.55
TRIM49C-201ENST00000448984 C19orf54Q5BKX5 351 aa5.34□□□□□ -1.55
TRIM49C-201ENST00000448984 FAM19A3Q7Z5A8 133 aa5.34□□□□□ -1.55
TRIM49C-201ENST00000448984 FAM229BQ4G0N7 80 aa5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 SMIM11BQ8TCY0 68 aa5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 DYNLRB2Q8TF09 96 aa5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 ACANP16112 2415 aa5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 IGHV3-16A0A0C4DH30 117 aa5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 PAX4O43316 350 aa5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 LINC00337Q8N6G1 96 aa5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 C11orf68Q9H3H3 251 aaKnown RBP5.33□□□□□ -1.56
TRIM49C-201ENST00000448984 B4DSR2 109 aa5.32□□□□□ -1.56
TRIM49C-201ENST00000448984 RNASE13Q5GAN3 156 aaKnown RBP5.32□□□□□ -1.56
TRIM49C-201ENST00000448984 MRPL55Q7Z7F7 128 aaKnown RBP5.32□□□□□ -1.56
TRIM49C-201ENST00000448984 A0A096LNT2 108 aa5.32□□□□□ -1.56
TRIM49C-201ENST00000448984 SMIM1B2RUZ4 78 aa5.32□□□□□ -1.56
TRIM49C-201ENST00000448984 CHCHD7Q9BUK0 85 aa5.32□□□□□ -1.56
TRIM49C-201ENST00000448984 FASNP49327 2511 aaKnown RBP5.32□□□□□ -1.56
TRIM49C-201ENST00000448984 NIPBLQ6KC79 2804 aaeCLIP5.32□□□□□ -1.56
TRIM49C-201ENST00000448984 IGKV2-28A0A075B6P5 120 aa5.31□□□□□ -1.56
TRIM49C-201ENST00000448984 IGKV2D-28P01615 120 aa5.31□□□□□ -1.56
TRIM49C-201ENST00000448984 CXCL6P80162 114 aa5.31□□□□□ -1.56
TRIM49C-201ENST00000448984 DAD1P61803 113 aa5.31□□□□□ -1.56
TRIM49C-201ENST00000448984 C11orf72Q8NBR9 251 aa5.31□□□□□ -1.56
TRIM49C-201ENST00000448984 SND1-IT1Q9HBX3 110 aa5.31□□□□□ -1.56
TRIM49C-201ENST00000448984 MTORP42345 2549 aa5.3□□□□□ -1.56
TRIM49C-201ENST00000448984 ANK3Q12955 4377 aaKnown RBP5.3□□□□□ -1.56
TRIM49C-201ENST00000448984 TRAV10A0A0B4J240 114 aa5.3□□□□□ -1.56
TRIM49C-201ENST00000448984 TMEM256-PLSCR3K7ERE1 68 aa5.3□□□□□ -1.56
TRIM49C-201ENST00000448984 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
TRIM49C-201ENST00000448984 C18orf65Q6ZTR6 163 aa5.3□□□□□ -1.56
TRIM49C-201ENST00000448984 IGKV3-20P01619 116 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 LINC01547P58512 204 aaPredicted RBP5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 RPL36AP83881 106 aaKnown RBP5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 Q1T7F1 81 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 LINC01356Q8N9X3 169 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 TMEM254Q8TBM7 123 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 RPL36ALQ969Q0 106 aaKnown RBP5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 PRYO14603 147 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 LY6G6DO95868 133 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 IGHV4-31P0DP07 118 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 DEFB136Q30KP8 78 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 RHPN1-AS1Q9BWJ2 59 aa5.29□□□□□ -1.56
TRIM49C-201ENST00000448984 FUSP35637 526 aaKnown RBP eCLIP5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 NREPQ16612 68 aa5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 WNK1Q9H4A3 2382 aa5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 LOC110117498A0A087WWA1 95 aa5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 IGLV1-40P01703 118 aa5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 COX6A2Q02221 97 aa5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 LINC00242Q5T6M2 205 aa5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 LINC00467Q9BRT7 94 aa5.28□□□□□ -1.56
TRIM49C-201ENST00000448984 IGHV3OR16-12A0A075B7B8 117 aa5.27□□□□□ -1.57
TRIM49C-201ENST00000448984 IGHV1OR15-1A0A075B7D0 117 aa5.27□□□□□ -1.57
TRIM49C-201ENST00000448984 NDUFA4O00483 81 aa5.27□□□□□ -1.57
TRIM49C-201ENST00000448984 SLPIP03973 132 aa5.27□□□□□ -1.57
TRIM49C-201ENST00000448984 KRTAP1-3Q8IUG1 177 aa5.27□□□□□ -1.57
TRIM49C-201ENST00000448984 TM2D3Q9BRN9 247 aa5.27□□□□□ -1.57
TRIM49C-201ENST00000448984 IGHV3-38A0A0C4DH36 116 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 DSCR9P59020 149 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 Q6ZQT0 140 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 NOTCH2Q04721 2471 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 LYRM9A8MSI8 78 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 PLA2G2AP14555 144 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 DEFB113Q30KQ7 82 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 DGAT2L7PQ6IED9 249 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 Q6ZTC4 211 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 Q6ZVQ6 151 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 Q8N3U1 123 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 C11orf44Q8N8P7 122 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 USMG5Q96IX5 58 aa5.26□□□□□ -1.57
TRIM49C-201ENST00000448984 C6orf223Q8N319 242 aa5.25□□□□□ -1.57
TRIM49C-201ENST00000448984 hDV103S1A0JD37 113 aa5.25□□□□□ -1.57
TRIM49C-201ENST00000448984 PRM2P04554 102 aa5.25□□□□□ -1.57
TRIM49C-201ENST00000448984 PDE6GP18545 87 aa5.25□□□□□ -1.57
TRIM49C-201ENST00000448984 Q8N814 137 aa5.25□□□□□ -1.57
TRIM49C-201ENST00000448984 ZNF702PQ9H963 129 aa5.25□□□□□ -1.57
TRIM49C-201ENST00000448984 TRBV6-4A0A1B0GX49 114 aa5.24□□□□□ -1.57
TRIM49C-201ENST00000448984 SLURP1P55000 103 aa5.24□□□□□ -1.57
TRIM49C-201ENST00000448984 CCL18P55774 89 aa5.24□□□□□ -1.57
TRIM49C-201ENST00000448984 HAMPP81172 84 aa5.24□□□□□ -1.57
TRIM49C-201ENST00000448984 NOTCH3Q9UM47 2321 aa5.24□□□□□ -1.57
TRIM49C-201ENST00000448984 SETXQ7Z333 2677 aaKnown RBP5.24□□□□□ -1.57
TRIM49C-201ENST00000448984 STHQ8IWL8 128 aa5.23□□□□□ -1.57
TRIM49C-201ENST00000448984 K7EQG2 157 aa5.23□□□□□ -1.57
TRIM49C-201ENST00000448984 UBE2BP63146 152 aa5.23□□□□□ -1.57
TRIM49C-201ENST00000448984 C9orf66Q5T8R8 295 aa5.23□□□□□ -1.57
TRIM49C-201ENST00000448984 Q6YL49 198 aa5.23□□□□□ -1.57
TRIM49C-201ENST00000448984 RBM12B-AS1Q9P1G2 102 aa5.23□□□□□ -1.57
TRIM49C-201ENST00000448984 A0A087WZ39 114 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms