RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 GAGE10A6NGK3 116 aa10.49□□□□□ -0.73
CHCHD3-203ENST00000448878 UBE2AP49459 152 aa10.49□□□□□ -0.73
CHCHD3-203ENST00000448878 TMEM136Q6ZRR5 245 aa10.49□□□□□ -0.73
CHCHD3-203ENST00000448878 ORMDL3Q8N138 153 aa10.49□□□□□ -0.73
CHCHD3-203ENST00000448878 LINC00167Q96N53 147 aa10.49□□□□□ -0.73
CHCHD3-203ENST00000448878 VCX2Q9H322 139 aa10.49□□□□□ -0.73
CHCHD3-203ENST00000448878 TP73-AS1Q9UF72 201 aa10.49□□□□□ -0.73
CHCHD3-203ENST00000448878 KRTAP13-2Q52LG2 175 aa10.48□□□□□ -0.73
CHCHD3-203ENST00000448878 Q8IZM0 81 aa10.48□□□□□ -0.73
CHCHD3-203ENST00000448878 PRELID3AQ96N28 172 aa10.48□□□□□ -0.73
CHCHD3-203ENST00000448878 TPRXLQ17RH7 258 aa10.47□□□□□ -0.73
CHCHD3-203ENST00000448878 IGKV2D-26A0A0A0MRZ7 120 aa10.46□□□□□ -0.73
CHCHD3-203ENST00000448878 F8VRH5 84 aa10.46□□□□□ -0.73
CHCHD3-203ENST00000448878 NAT8Q9UHE5 227 aa10.46□□□□□ -0.73
CHCHD3-203ENST00000448878 CYSLTR1Q9Y271 337 aa10.46□□□□□ -0.73
CHCHD3-203ENST00000448878 COMMD7Q86VX2 200 aa10.45□□□□□ -0.74
CHCHD3-203ENST00000448878 C2orf66Q6UXQ4 117 aa10.44□□□□□ -0.74
CHCHD3-203ENST00000448878 A0A1B0GXF2 115 aa10.43□□□□□ -0.74
CHCHD3-203ENST00000448878 AMELXQ99217 191 aa10.43□□□□□ -0.74
CHCHD3-203ENST00000448878 MAP1LC3AQ9H492 121 aa10.43□□□□□ -0.74
CHCHD3-203ENST00000448878 NKAPP1Q8N9T2 125 aa10.42□□□□□ -0.74
CHCHD3-203ENST00000448878 GEMIN7Q9H840 131 aaKnown RBP10.42□□□□□ -0.74
CHCHD3-203ENST00000448878 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
CHCHD3-203ENST00000448878 HERVK_113P63121 156 aa10.41□□□□□ -0.74
CHCHD3-203ENST00000448878 SEC11AP67812 179 aa10.41□□□□□ -0.74
CHCHD3-203ENST00000448878 FAM229BQ4G0N7 80 aa10.41□□□□□ -0.74
CHCHD3-203ENST00000448878 PPDPFQ9H3Y8 114 aa10.41□□□□□ -0.74
CHCHD3-203ENST00000448878 RAB5BP61020 215 aa10.4□□□□□ -0.74
CHCHD3-203ENST00000448878 PEA15Q15121 130 aa10.4□□□□□ -0.74
CHCHD3-203ENST00000448878 CXCL5P42830 114 aa10.39□□□□□ -0.75
CHCHD3-203ENST00000448878 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
CHCHD3-203ENST00000448878 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
CHCHD3-203ENST00000448878 IGKV2-28A0A075B6P5 120 aa10.38□□□□□ -0.75
CHCHD3-203ENST00000448878 C9JQL5 133 aa10.38□□□□□ -0.75
CHCHD3-203ENST00000448878 IGKV2D-28P01615 120 aa10.38□□□□□ -0.75
CHCHD3-203ENST00000448878 ORMDL2Q53FV1 153 aa10.38□□□□□ -0.75
CHCHD3-203ENST00000448878 SLC7A5P1Q8MH63 180 aa10.38□□□□□ -0.75
CHCHD3-203ENST00000448878 Q8N8P6 123 aa10.38□□□□□ -0.75
CHCHD3-203ENST00000448878 PRSS47A8MTI9 375 aa10.37□□□□□ -0.75
CHCHD3-203ENST00000448878 FAM19A3Q7Z5A8 133 aa10.37□□□□□ -0.75
CHCHD3-203ENST00000448878 KRTAP13-1Q8IUC0 172 aa10.37□□□□□ -0.75
CHCHD3-203ENST00000448878 IGIPA6NJ69 53 aa10.36□□□□□ -0.75
CHCHD3-203ENST00000448878 LINC01547P58512 204 aaPredicted RBP10.36□□□□□ -0.75
CHCHD3-203ENST00000448878 PRLHP81277 87 aa10.36□□□□□ -0.75
CHCHD3-203ENST00000448878 PAPPA-AS1Q5QFB9 102 aa10.36□□□□□ -0.75
CHCHD3-203ENST00000448878 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
CHCHD3-203ENST00000448878 LAMTOR2Q9Y2Q5 125 aa10.36□□□□□ -0.75
CHCHD3-203ENST00000448878 MUC17Q685J3 4493 aa10.36□□□□□ -0.75
CHCHD3-203ENST00000448878 SCO1O75880 301 aa10.35□□□□□ -0.75
CHCHD3-203ENST00000448878 FAM19A1Q7Z5A9 133 aa10.35□□□□□ -0.75
CHCHD3-203ENST00000448878 LINC00337Q8N6G1 96 aa10.35□□□□□ -0.75
CHCHD3-203ENST00000448878 COX7B2Q8TF08 81 aa10.35□□□□□ -0.75
CHCHD3-203ENST00000448878 NPSP0C0P6 89 aa10.34□□□□□ -0.75
CHCHD3-203ENST00000448878 SRSF3P84103 164 aaKnown RBP10.34□□□□□ -0.75
CHCHD3-203ENST00000448878 IGLV5-37A0A075B6J1 123 aa10.32□□□□□ -0.76
CHCHD3-203ENST00000448878 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
CHCHD3-203ENST00000448878 ATP6V1G1O75348 118 aa10.32□□□□□ -0.76
CHCHD3-203ENST00000448878 C3orf22Q8N5N4 141 aa10.32□□□□□ -0.76
CHCHD3-203ENST00000448878 S100A1P23297 94 aa10.31□□□□□ -0.76
CHCHD3-203ENST00000448878 CTAG1AP78358 180 aa10.31□□□□□ -0.76
CHCHD3-203ENST00000448878 PDZD11Q5EBL8 140 aa10.31□□□□□ -0.76
CHCHD3-203ENST00000448878 G0S2P27469 103 aa10.3□□□□□ -0.76
CHCHD3-203ENST00000448878 C4orf48Q5BLP8 95 aa10.3□□□□□ -0.76
CHCHD3-203ENST00000448878 TMEM218A2RU14 115 aa10.29□□□□□ -0.76
CHCHD3-203ENST00000448878 TMEM238C9JI98 176 aa10.29□□□□□ -0.76
CHCHD3-203ENST00000448878 K7EMI3 77 aa10.29□□□□□ -0.76
CHCHD3-203ENST00000448878 SPINK8P0C7L1 97 aa10.28□□□□□ -0.76
CHCHD3-203ENST00000448878 PFN2P35080 140 aa10.28□□□□□ -0.76
CHCHD3-203ENST00000448878 SPAG11AQ6PDA7 123 aa10.28□□□□□ -0.76
CHCHD3-203ENST00000448878 CBLN2Q8IUK8 224 aa10.28□□□□□ -0.76
CHCHD3-203ENST00000448878 SCGB3A1Q96QR1 104 aa10.28□□□□□ -0.76
CHCHD3-203ENST00000448878 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
CHCHD3-203ENST00000448878 TMEM126AQ9H061 195 aa10.28□□□□□ -0.76
CHCHD3-203ENST00000448878 NXT2Q9NPJ8 142 aaKnown RBP10.28□□□□□ -0.76
CHCHD3-203ENST00000448878 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.77
CHCHD3-203ENST00000448878 ATP5LO75964 103 aa10.26□□□□□ -0.77
CHCHD3-203ENST00000448878 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
CHCHD3-203ENST00000448878 HIGD2AQ9BW72 106 aa10.26□□□□□ -0.77
CHCHD3-203ENST00000448878 SEC11CQ9BY50 192 aa10.26□□□□□ -0.77
CHCHD3-203ENST00000448878 TINCRA0A1B0GVN0 87 aa10.25□□□□□ -0.77
CHCHD3-203ENST00000448878 FP248Q71RG6 208 aaPredicted RBP10.25□□□□□ -0.77
CHCHD3-203ENST00000448878 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
CHCHD3-203ENST00000448878 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
CHCHD3-203ENST00000448878 CRCT1Q9UGL9 99 aa10.25□□□□□ -0.77
CHCHD3-203ENST00000448878 ERASQ7Z444 233 aa10.24□□□□□ -0.77
CHCHD3-203ENST00000448878 ASB16-AS1Q495Z4 193 aa10.23□□□□□ -0.77
CHCHD3-203ENST00000448878 FSIP2Q5CZC0 6907 aa10.23□□□□□ -0.77
CHCHD3-203ENST00000448878 M0R378 163 aa10.22□□□□□ -0.77
CHCHD3-203ENST00000448878 ADCYAP1P18509 176 aa10.22□□□□□ -0.77
CHCHD3-203ENST00000448878 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
CHCHD3-203ENST00000448878 GNB1LQ9BYB4 327 aa10.22□□□□□ -0.77
CHCHD3-203ENST00000448878 APOC3P02656 99 aa10.21□□□□□ -0.77
CHCHD3-203ENST00000448878 VPREB1P12018 145 aa10.21□□□□□ -0.77
CHCHD3-203ENST00000448878 SEC61BP60468 96 aaKnown RBP10.21□□□□□ -0.77
CHCHD3-203ENST00000448878 KRTAP13-3Q3SY46 172 aa10.21□□□□□ -0.77
CHCHD3-203ENST00000448878 C10orf91Q5T1B1 145 aa10.21□□□□□ -0.77
CHCHD3-203ENST00000448878 SVBPQ8N300 66 aa10.21□□□□□ -0.77
CHCHD3-203ENST00000448878 DAND5Q8N907 189 aa10.21□□□□□ -0.77
CHCHD3-203ENST00000448878 IGLV5-45A0A087WSX0 123 aa10.2□□□□□ -0.78
CHCHD3-203ENST00000448878 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms