RNA–Protein interactions for RNA: ENST00000448748.1

LINC00349-201, long intergenic non-protein coding RNA 349, humanhuman

TSL 5 BASIC

Gene LINC00349, Length 841 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00349-201ENST00000448748 XCL1P47992 114 aa4.32□□□□□ -1.72
LINC00349-201ENST00000448748 CFAP161Q6P656 301 aa4.32□□□□□ -1.72
LINC00349-201ENST00000448748 SPACA4Q8TDM5 124 aa4.32□□□□□ -1.72
LINC00349-201ENST00000448748 GNB1LQ9BYB4 327 aa4.32□□□□□ -1.72
LINC00349-201ENST00000448748 IGLV4-3A0A075B6K6 122 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.31□□□□□ -1.72
LINC00349-201ENST00000448748 IGHV1-58A0A0C4DH39 117 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 IGIPA6NJ69 53 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 SS18Q15532 418 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 RNASE13Q5GAN3 156 aaKnown RBP4.31□□□□□ -1.72
LINC00349-201ENST00000448748 LINC00173Q6ZV60 143 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 FAM19A3Q7Z5A8 133 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 AMELXQ99217 191 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
LINC00349-201ENST00000448748 IGHV3-64A0A075B6Q5 118 aa4.3□□□□□ -1.72
LINC00349-201ENST00000448748 COX7A2LO14548 114 aa4.3□□□□□ -1.72
LINC00349-201ENST00000448748 MT-ND6P03923 174 aa4.3□□□□□ -1.72
LINC00349-201ENST00000448748 HIGD2BQ4VC39 106 aa4.3□□□□□ -1.72
LINC00349-201ENST00000448748 ORMDL2Q53FV1 153 aa4.3□□□□□ -1.72
LINC00349-201ENST00000448748 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
LINC00349-201ENST00000448748 NXT2Q9NPJ8 142 aaKnown RBP4.3□□□□□ -1.72
LINC00349-201ENST00000448748 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
LINC00349-201ENST00000448748 TRAV13-1A0A0B4J241 112 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 RAB5AP20339 215 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 IFI27P40305 119 aaPredicted RBP4.29□□□□□ -1.72
LINC00349-201ENST00000448748 COX19Q49B96 90 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 LINC00242Q5T6M2 205 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 OR10D4PQ8NGN7 298 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 TMEM141Q96I45 108 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 C2orf48Q96LS8 159 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 CYSLTR1Q9Y271 337 aa4.29□□□□□ -1.72
LINC00349-201ENST00000448748 A0A087WZ39 114 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 CHTF8P0CG12 524 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 INAFM2P0DMQ5 153 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 S100PP25815 95 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 UBE2D1P51668 147 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 LINC01561Q8N1V8 128 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 SVBPQ8N300 66 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 TOMM6Q96B49 74 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 TIMM17AQ99595 171 aa4.28□□□□□ -1.72
LINC00349-201ENST00000448748 IGLV4-69A0A075B6H9 119 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 A0A096LNI7 61 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 A0A096LNJ9 63 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 LOC389332A0A1B0GUA5 103 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 F8WDY8 70 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 SNAPINO95295 136 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 COX6A2Q02221 97 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 SYCNQ0VAF6 134 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 KIAA0087Q14695 138 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 LINC00526Q96FQ7 95 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 CARD19Q96LW7 228 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 RPS10P5Q9NQ39 176 aa4.27□□□□□ -1.73
LINC00349-201ENST00000448748 TGIF2-C20orf24A0A0A6YYL0 155 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 LINC01549A6NIU2 74 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.26□□□□□ -1.73
LINC00349-201ENST00000448748 APOC3P02656 99 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 TEX43Q6ZNM6 134 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 Q6ZRP5 223 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 Q6ZRU5 148 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 ERASQ7Z444 233 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 C5orf38Q86SI9 138 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 MRPL35Q9NZE8 188 aaKnown RBP4.26□□□□□ -1.73
LINC00349-201ENST00000448748 LINC00474Q9P2X8 69 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 PKIGQ9Y2B9 76 aa4.26□□□□□ -1.73
LINC00349-201ENST00000448748 APOMO95445 188 aa4.25□□□□□ -1.73
LINC00349-201ENST00000448748 TLX1NBP0CAT3 122 aa4.25□□□□□ -1.73
LINC00349-201ENST00000448748 G0S2P27469 103 aa4.25□□□□□ -1.73
LINC00349-201ENST00000448748 HNRNPA3P51991 378 aaKnown RBP4.25□□□□□ -1.73
LINC00349-201ENST00000448748 SPAG11BQ08648 103 aa4.25□□□□□ -1.73
LINC00349-201ENST00000448748 C18orf32Q8TCD1 76 aa4.25□□□□□ -1.73
LINC00349-201ENST00000448748 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
LINC00349-201ENST00000448748 NDUFA5Q16718 116 aa4.24□□□□□ -1.73
LINC00349-201ENST00000448748 ORAOV1Q8WV07 137 aa4.24□□□□□ -1.73
LINC00349-201ENST00000448748 C2orf88Q9BSF0 95 aa4.24□□□□□ -1.73
LINC00349-201ENST00000448748 IGKV2-24A0A0C4DH68 120 aa4.23□□□□□ -1.73
LINC00349-201ENST00000448748 A0A0J9YXV3 536 aa4.23□□□□□ -1.73
LINC00349-201ENST00000448748 LOC107984640A0A0U1RRK4 108 aa4.23□□□□□ -1.73
LINC00349-201ENST00000448748 RPL37AP61513 92 aaKnown RBP4.23□□□□□ -1.73
LINC00349-201ENST00000448748 FABP9Q0Z7S8 132 aa4.23□□□□□ -1.73
LINC00349-201ENST00000448748 Q6ZN92 141 aa4.23□□□□□ -1.73
LINC00349-201ENST00000448748 CAMK2N2Q96S95 79 aa4.23□□□□□ -1.73
LINC00349-201ENST00000448748 VCX2Q9H322 139 aa4.23□□□□□ -1.73
LINC00349-201ENST00000448748 C6orf48Q9UBA6 75 aa4.23□□□□□ -1.73
LINC00349-201ENST00000448748 TRBV30A0A0K0K1B3 111 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 TINCRA0A1B0GVN0 87 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 NDUFA1O15239 70 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 HERVK_113P63121 156 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 SEC11AP67812 179 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 PRR3P79522 188 aaKnown RBP4.22□□□□□ -1.73
LINC00349-201ENST00000448748 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 PDZD11Q5EBL8 140 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 CBLN2Q8IUK8 224 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 Q8IZM0 81 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 CST9LQ9H4G1 147 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 TRAPPC1Q9Y5R8 145 aa4.22□□□□□ -1.73
LINC00349-201ENST00000448748 LRP2P98164 4655 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms