RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PMVKQ15126 192 aa7.91□□□□□ -1.14
PRPF40A-203ENST00000448428 GAGE2EQ4V326 116 aa7.91□□□□□ -1.14
PRPF40A-203ENST00000448428 Q8IZM0 81 aa7.91□□□□□ -1.14
PRPF40A-203ENST00000448428 PACRGQ96M98 296 aaPredicted RBP7.91□□□□□ -1.14
PRPF40A-203ENST00000448428 GAGE2DQ9UEU5 116 aa7.91□□□□□ -1.14
PRPF40A-203ENST00000448428 FAM168BA1KXE4 195 aa7.9□□□□□ -1.14
PRPF40A-203ENST00000448428 CKS1BP61024 79 aa7.9□□□□□ -1.14
PRPF40A-203ENST00000448428 LINC00469Q8N7U9 141 aa7.9□□□□□ -1.14
PRPF40A-203ENST00000448428 IGLV5-45A0A087WSX0 123 aa7.89□□□□□ -1.15
PRPF40A-203ENST00000448428 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
PRPF40A-203ENST00000448428 PMCHL1Q16048 86 aa7.89□□□□□ -1.15
PRPF40A-203ENST00000448428 PHF5AQ7RTV0 110 aaKnown RBP7.89□□□□□ -1.15
PRPF40A-203ENST00000448428 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
PRPF40A-203ENST00000448428 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
PRPF40A-203ENST00000448428 KRTAP7-1Q8IUC3 87 aa7.88□□□□□ -1.15
PRPF40A-203ENST00000448428 SLC7A5P1Q8MH63 180 aa7.88□□□□□ -1.15
PRPF40A-203ENST00000448428 HERC1Q15751 4861 aa7.88□□□□□ -1.15
PRPF40A-203ENST00000448428 LRP1Q07954 4544 aaKnown RBP7.88□□□□□ -1.15
PRPF40A-203ENST00000448428 HBDP02042 147 aa7.87□□□□□ -1.15
PRPF40A-203ENST00000448428 NDUFA6P56556 154 aa7.87□□□□□ -1.15
PRPF40A-203ENST00000448428 RAB5BP61020 215 aa7.87□□□□□ -1.15
PRPF40A-203ENST00000448428 SRSF9Q13242 221 aaKnown RBP eCLIP7.87□□□□□ -1.15
PRPF40A-203ENST00000448428 PDZD11Q5EBL8 140 aa7.87□□□□□ -1.15
PRPF40A-203ENST00000448428 CBLN2Q8IUK8 224 aa7.87□□□□□ -1.15
PRPF40A-203ENST00000448428 PSORS1C2Q9UIG4 136 aa7.87□□□□□ -1.15
PRPF40A-203ENST00000448428 F8VRH5 84 aa7.86□□□□□ -1.15
PRPF40A-203ENST00000448428 SPINK8P0C7L1 97 aa7.86□□□□□ -1.15
PRPF40A-203ENST00000448428 MT1HL1P0DM35 61 aa7.86□□□□□ -1.15
PRPF40A-203ENST00000448428 C9orf129Q5T035 196 aaKnown RBP7.86□□□□□ -1.15
PRPF40A-203ENST00000448428 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
PRPF40A-203ENST00000448428 COX7B2Q8TF08 81 aa7.86□□□□□ -1.15
PRPF40A-203ENST00000448428 SPINK6Q6UWN8 80 aa7.85□□□□□ -1.15
PRPF40A-203ENST00000448428 KRTAP11-1Q8IUC1 163 aa7.85□□□□□ -1.15
PRPF40A-203ENST00000448428 IGLC3P0DOY3 106 aa7.84□□□□□ -1.15
PRPF40A-203ENST00000448428 CXCL5P42830 114 aa7.84□□□□□ -1.15
PRPF40A-203ENST00000448428 H3BRM9 83 aa7.83□□□□□ -1.16
PRPF40A-203ENST00000448428 ATP5LO75964 103 aa7.83□□□□□ -1.16
PRPF40A-203ENST00000448428 C1orf137Q5JT78 98 aa7.83□□□□□ -1.16
PRPF40A-203ENST00000448428 XAGE1AQ9HD64 81 aa7.83□□□□□ -1.16
PRPF40A-203ENST00000448428 M0QXV9 152 aa7.82□□□□□ -1.16
PRPF40A-203ENST00000448428 BAGE3Q86Y29 109 aa7.82□□□□□ -1.16
PRPF40A-203ENST00000448428 FAT3Q8TDW7 4589 aa7.82□□□□□ -1.16
PRPF40A-203ENST00000448428 CHCHD1Q96BP2 118 aaKnown RBP7.82□□□□□ -1.16
PRPF40A-203ENST00000448428 LINC01600Q96MT4 127 aa7.82□□□□□ -1.16
PRPF40A-203ENST00000448428 ZNF22P17026 224 aaPredicted RBP7.81□□□□□ -1.16
PRPF40A-203ENST00000448428 SERTAD4-AS1Q5TG53 156 aa7.81□□□□□ -1.16
PRPF40A-203ENST00000448428 IGLV5-39A0A0G2JS06 123 aa7.8□□□□□ -1.16
PRPF40A-203ENST00000448428 C11orf86A6NJI1 115 aa7.8□□□□□ -1.16
PRPF40A-203ENST00000448428 TRGC2P03986 189 aa7.8□□□□□ -1.16
PRPF40A-203ENST00000448428 REG3GQ6UW15 175 aa7.8□□□□□ -1.16
PRPF40A-203ENST00000448428 IGLV7-43P04211 117 aa7.79□□□□□ -1.16
PRPF40A-203ENST00000448428 C22orf24Q9Y442 160 aa7.79□□□□□ -1.16
PRPF40A-203ENST00000448428 UBE2BP63146 152 aa7.78□□□□□ -1.16
PRPF40A-203ENST00000448428 FAM19A2Q8N3H0 131 aa7.78□□□□□ -1.16
PRPF40A-203ENST00000448428 IFI27L1Q96BM0 104 aa7.78□□□□□ -1.16
PRPF40A-203ENST00000448428 CHTOPQ9Y3Y2 248 aaKnown RBP7.78□□□□□ -1.16
PRPF40A-203ENST00000448428 COLCA2A8K830 154 aa7.77□□□□□ -1.17
PRPF40A-203ENST00000448428 HSBP1O75506 76 aa7.77□□□□□ -1.17
PRPF40A-203ENST00000448428 TMEM170BQ5T4T1 132 aa7.77□□□□□ -1.17
PRPF40A-203ENST00000448428 TRAV12-1A0A0B4J245 112 aa7.76□□□□□ -1.17
PRPF40A-203ENST00000448428 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
PRPF40A-203ENST00000448428 LINC00310P59036 64 aa7.75□□□□□ -1.17
PRPF40A-203ENST00000448428 ODF1Q14990 250 aa7.75□□□□□ -1.17
PRPF40A-203ENST00000448428 LBHQ53QV2 105 aaPredicted RBP7.75□□□□□ -1.17
PRPF40A-203ENST00000448428 SERF1AO75920 110 aa7.74□□□□□ -1.17
PRPF40A-203ENST00000448428 PFN2P35080 140 aa7.74□□□□□ -1.17
PRPF40A-203ENST00000448428 MRPL55Q7Z7F7 128 aaKnown RBP7.74□□□□□ -1.17
PRPF40A-203ENST00000448428 DIRC1Q969H9 104 aa7.74□□□□□ -1.17
PRPF40A-203ENST00000448428 TP73-AS1Q9UF72 201 aa7.74□□□□□ -1.17
PRPF40A-203ENST00000448428 PLA2G2DQ9UNK4 145 aa7.74□□□□□ -1.17
PRPF40A-203ENST00000448428 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
PRPF40A-203ENST00000448428 NUPR1O60356 82 aa7.73□□□□□ -1.17
PRPF40A-203ENST00000448428 ZNF625Q96I27 306 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-203ENST00000448428 LINC00167Q96N53 147 aa7.72□□□□□ -1.17
PRPF40A-203ENST00000448428 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
PRPF40A-203ENST00000448428 RPL37AP8A6NKH3 93 aa7.71□□□□□ -1.18
PRPF40A-203ENST00000448428 H0Y9J4 135 aa7.71□□□□□ -1.18
PRPF40A-203ENST00000448428 LEPROTL1O95214 131 aa7.71□□□□□ -1.18
PRPF40A-203ENST00000448428 COX17Q14061 63 aa7.71□□□□□ -1.18
PRPF40A-203ENST00000448428 SND1-IT1Q9HBX3 110 aa7.71□□□□□ -1.18
PRPF40A-203ENST00000448428 IGLV5-37A0A075B6J1 123 aa7.7□□□□□ -1.18
PRPF40A-203ENST00000448428 H0Y8G0 127 aa7.7□□□□□ -1.18
PRPF40A-203ENST00000448428 SCO1O75880 301 aa7.7□□□□□ -1.18
PRPF40A-203ENST00000448428 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
PRPF40A-203ENST00000448428 SFTA2Q6UW10 78 aa7.69□□□□□ -1.18
PRPF40A-203ENST00000448428 ZNF861PO60384 105 aa7.68□□□□□ -1.18
PRPF40A-203ENST00000448428 FABP4P15090 132 aa7.68□□□□□ -1.18
PRPF40A-203ENST00000448428 NKAPP1Q8N9T2 125 aa7.68□□□□□ -1.18
PRPF40A-203ENST00000448428 KRTAP1-4P0C5Y4 121 aa7.67□□□□□ -1.18
PRPF40A-203ENST00000448428 PRR26Q8N8Z3 221 aa7.67□□□□□ -1.18
PRPF40A-203ENST00000448428 HSPB8Q9UJY1 196 aa7.67□□□□□ -1.18
PRPF40A-203ENST00000448428 BCE1O60756 84 aa7.66□□□□□ -1.18
PRPF40A-203ENST00000448428 VPREB1P12018 145 aa7.66□□□□□ -1.18
PRPF40A-203ENST00000448428 LINC00158P58513 81 aa7.66□□□□□ -1.18
PRPF40A-203ENST00000448428 Q8NDZ9 215 aa7.66□□□□□ -1.18
PRPF40A-203ENST00000448428 TNXBP22105 4242 aa7.65□□□□□ -1.18
PRPF40A-203ENST00000448428 A0A0U1RRA0 63 aa7.65□□□□□ -1.18
PRPF40A-203ENST00000448428 IGKV2-28A0A075B6P5 120 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 HIST1H2BKO60814 126 aa7.64□□□□□ -1.19
PRPF40A-203ENST00000448428 IGKV2D-28P01615 120 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms