RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 KHDC1LQ5JSQ8 128 aa6.53□□□□□ -1.36
SYNPO2-204ENST00000448416 LINC00575Q6W349 94 aa6.53□□□□□ -1.36
SYNPO2-204ENST00000448416 C6orf223Q8N319 242 aa6.53□□□□□ -1.36
SYNPO2-204ENST00000448416 IGHV4-61A0A0C4DH41 118 aa6.52□□□□□ -1.37
SYNPO2-204ENST00000448416 C19orf84I3L1E1 186 aa6.52□□□□□ -1.37
SYNPO2-204ENST00000448416 DEFB136Q30KP8 78 aa6.52□□□□□ -1.37
SYNPO2-204ENST00000448416 C11orf44Q8N8P7 122 aa6.52□□□□□ -1.37
SYNPO2-204ENST00000448416 ESRGQ1W209 222 aa6.51□□□□□ -1.37
SYNPO2-204ENST00000448416 BPY2O14599 106 aa6.51□□□□□ -1.37
SYNPO2-204ENST00000448416 IGHV4-59P01825 116 aa6.51□□□□□ -1.37
SYNPO2-204ENST00000448416 PDE6GP18545 87 aa6.51□□□□□ -1.37
SYNPO2-204ENST00000448416 C1orf158Q8N1D5 194 aa6.51□□□□□ -1.37
SYNPO2-204ENST00000448416 PRB1P04280 392 aa6.51□□□□□ -1.37
SYNPO2-204ENST00000448416 DYNLRB2Q8TF09 96 aa6.51□□□□□ -1.37
SYNPO2-204ENST00000448416 NOP10Q9NPE3 64 aaKnown RBP6.51□□□□□ -1.37
SYNPO2-204ENST00000448416 TRGV2A0A075B6R0 118 aa6.5□□□□□ -1.37
SYNPO2-204ENST00000448416 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
SYNPO2-204ENST00000448416 GNLYP22749 145 aa6.5□□□□□ -1.37
SYNPO2-204ENST00000448416 A0A1W2PRX2 142 aa6.5□□□□□ -1.37
SYNPO2-204ENST00000448416 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
SYNPO2-204ENST00000448416 DEFB123Q8N688 67 aa6.5□□□□□ -1.37
SYNPO2-204ENST00000448416 IL17DQ8TAD2 202 aa6.5□□□□□ -1.37
SYNPO2-204ENST00000448416 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
SYNPO2-204ENST00000448416 STHQ8IWL8 128 aa6.49□□□□□ -1.37
SYNPO2-204ENST00000448416 Q8IZM0 81 aa6.49□□□□□ -1.37
SYNPO2-204ENST00000448416 PRYO14603 147 aa6.49□□□□□ -1.37
SYNPO2-204ENST00000448416 Q6ZQY7 126 aa6.49□□□□□ -1.37
SYNPO2-204ENST00000448416 MUC7Q8TAX7 377 aa6.49□□□□□ -1.37
SYNPO2-204ENST00000448416 CRYBG3Q68DQ2 2970 aa6.49□□□□□ -1.37
SYNPO2-204ENST00000448416 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
SYNPO2-204ENST00000448416 SPATA3Q8NHX4 192 aa6.48□□□□□ -1.37
SYNPO2-204ENST00000448416 ERC2-IT1O76042 136 aa6.48□□□□□ -1.37
SYNPO2-204ENST00000448416 C9orf66Q5T8R8 295 aa6.48□□□□□ -1.37
SYNPO2-204ENST00000448416 C18orf65Q6ZTR6 163 aa6.48□□□□□ -1.37
SYNPO2-204ENST00000448416 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
SYNPO2-204ENST00000448416 MAP1AP78559 2803 aaPredicted RBP6.47□□□□□ -1.37
SYNPO2-204ENST00000448416 PLAC8L1A1L4L8 177 aa6.47□□□□□ -1.37
SYNPO2-204ENST00000448416 DEFB112Q30KQ8 113 aa6.47□□□□□ -1.37
SYNPO2-204ENST00000448416 CLPSL2Q6UWE3 100 aa6.47□□□□□ -1.37
SYNPO2-204ENST00000448416 MSMBP08118 114 aa6.46□□□□□ -1.38
SYNPO2-204ENST00000448416 C9orf116Q5BN46 136 aaPredicted RBP6.46□□□□□ -1.38
SYNPO2-204ENST00000448416 BBC3Q96PG8 261 aaPredicted RBP6.46□□□□□ -1.38
SYNPO2-204ENST00000448416 DAD1P61803 113 aa6.46□□□□□ -1.38
SYNPO2-204ENST00000448416 Q8N9L7 120 aa6.45□□□□□ -1.38
SYNPO2-204ENST00000448416 COX17Q14061 63 aa6.45□□□□□ -1.38
SYNPO2-204ENST00000448416 Q6ZTC4 211 aa6.45□□□□□ -1.38
SYNPO2-204ENST00000448416 DEFB114Q30KQ6 69 aa6.45□□□□□ -1.38
SYNPO2-204ENST00000448416 Q8NDZ9 215 aa6.45□□□□□ -1.38
SYNPO2-204ENST00000448416 SPG11Q96JI7 2443 aa6.44□□□□□ -1.38
SYNPO2-204ENST00000448416 ATRXP46100 2492 aa6.44□□□□□ -1.38
SYNPO2-204ENST00000448416 H3BQ85 93 aa6.44□□□□□ -1.38
SYNPO2-204ENST00000448416 ODF3L2Q3SX64 289 aa6.44□□□□□ -1.38
SYNPO2-204ENST00000448416 PRR15Q8IV56 129 aa6.44□□□□□ -1.38
SYNPO2-204ENST00000448416 HIGD2AQ9BW72 106 aa6.44□□□□□ -1.38
SYNPO2-204ENST00000448416 LRCOL1A6NCL2 159 aa6.44□□□□□ -1.38
SYNPO2-204ENST00000448416 HIVEP3Q5T1R4 2406 aa6.44□□□□□ -1.38
SYNPO2-204ENST00000448416 LINC00269Q8N2A0 174 aa6.43□□□□□ -1.38
SYNPO2-204ENST00000448416 CD164L2Q6UWJ8 174 aa6.43□□□□□ -1.38
SYNPO2-204ENST00000448416 OCR1Q9BZK8 76 aa6.43□□□□□ -1.38
SYNPO2-204ENST00000448416 WNK1Q9H4A3 2382 aa6.43□□□□□ -1.38
SYNPO2-204ENST00000448416 TTC28Q96AY4 2481 aa6.42□□□□□ -1.38
SYNPO2-204ENST00000448416 ZFHX2Q9C0A1 2572 aaPredicted RBP6.42□□□□□ -1.38
SYNPO2-204ENST00000448416 VPS13CQ709C8 3753 aa6.42□□□□□ -1.38
SYNPO2-204ENST00000448416 IGHV4-30-2A0A087WSY4 118 aa6.42□□□□□ -1.38
SYNPO2-204ENST00000448416 KIAA0087Q14695 138 aa6.42□□□□□ -1.38
SYNPO2-204ENST00000448416 CEP295Q9C0D2 2601 aa6.41□□□□□ -1.38
SYNPO2-204ENST00000448416 ZNF292O60281 2723 aa6.41□□□□□ -1.38
SYNPO2-204ENST00000448416 LINC01006Q8NI28 216 aa6.41□□□□□ -1.38
SYNPO2-204ENST00000448416 IGKV4-1P06312 121 aa6.41□□□□□ -1.38
SYNPO2-204ENST00000448416 C16orf74Q96GX8 76 aa6.41□□□□□ -1.38
SYNPO2-204ENST00000448416 PLA2G2AP14555 144 aa6.4□□□□□ -1.38
SYNPO2-204ENST00000448416 Q6ZRU5 148 aa6.4□□□□□ -1.38
SYNPO2-204ENST00000448416 ZNF702PQ9H963 129 aa6.4□□□□□ -1.38
SYNPO2-204ENST00000448416 CSMD2Q7Z408 3487 aa6.4□□□□□ -1.38
SYNPO2-204ENST00000448416 hDV103S1A0JD37 113 aa6.4□□□□□ -1.39
SYNPO2-204ENST00000448416 B4DSR2 109 aa6.4□□□□□ -1.39
SYNPO2-204ENST00000448416 COX7BP24311 80 aa6.4□□□□□ -1.39
SYNPO2-204ENST00000448416 IGLV10-54A0A075B6I4 117 aa6.39□□□□□ -1.39
SYNPO2-204ENST00000448416 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.39□□□□□ -1.39
SYNPO2-204ENST00000448416 IGHV4-28A0A0C4DH34 117 aa6.39□□□□□ -1.39
SYNPO2-204ENST00000448416 IGHV4-31P0DP07 118 aa6.39□□□□□ -1.39
SYNPO2-204ENST00000448416 DIRC1Q969H9 104 aa6.39□□□□□ -1.39
SYNPO2-204ENST00000448416 IGLV6-57P01721 117 aa6.39□□□□□ -1.39
SYNPO2-204ENST00000448416 A0A1B0GUV1 79 aa6.38□□□□□ -1.39
SYNPO2-204ENST00000448416 PSPHP1O15172 72 aa6.38□□□□□ -1.39
SYNPO2-204ENST00000448416 CUBNO60494 3623 aa6.38□□□□□ -1.39
SYNPO2-204ENST00000448416 Q6ZRP5 223 aa6.38□□□□□ -1.39
SYNPO2-204ENST00000448416 CCL19Q99731 98 aa6.38□□□□□ -1.39
SYNPO2-204ENST00000448416 CR1P17927 2039 aa6.38□□□□□ -1.39
SYNPO2-204ENST00000448416 Q1T7F1 81 aa6.38□□□□□ -1.39
SYNPO2-204ENST00000448416 CHCHD10Q8WYQ3 142 aaPredicted RBP6.37□□□□□ -1.39
SYNPO2-204ENST00000448416 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
SYNPO2-204ENST00000448416 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
SYNPO2-204ENST00000448416 CELA1Q9UNI1 258 aa6.37□□□□□ -1.39
SYNPO2-204ENST00000448416 A0A096LPF7 62 aa6.36□□□□□ -1.39
SYNPO2-204ENST00000448416 GYPEP15421 78 aa6.36□□□□□ -1.39
SYNPO2-204ENST00000448416 UNQ6190/PRO20217Q6UXQ8 127 aa6.36□□□□□ -1.39
SYNPO2-204ENST00000448416 DEFB130BP0DP73 79 aa6.36□□□□□ -1.39
SYNPO2-204ENST00000448416 DEFB130AP0DP74 79 aa6.36□□□□□ -1.39
SYNPO2-204ENST00000448416 C4orf3Q8WVX3 66 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms