RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 EREGO14944 169 aa16.43■□□□□ 0.22
RFFL-206ENST00000447669 CKS1BP61024 79 aa16.43■□□□□ 0.22
RFFL-206ENST00000447669 HIST1H4GQ99525 98 aa16.43■□□□□ 0.22
RFFL-206ENST00000447669 SNHG12Q9BXW3 62 aa16.43■□□□□ 0.22
RFFL-206ENST00000447669 UNQ6190/PRO20217Q6UXQ8 127 aa16.43■□□□□ 0.22
RFFL-206ENST00000447669 C9orf116Q5BN46 136 aaPredicted RBP16.42■□□□□ 0.22
RFFL-206ENST00000447669 RMI2Q96E14 147 aa16.42■□□□□ 0.22
RFFL-206ENST00000447669 NPC2P61916 151 aa16.41■□□□□ 0.22
RFFL-206ENST00000447669 WFDC2Q14508 124 aa16.41■□□□□ 0.22
RFFL-206ENST00000447669 LINC00476Q8WZB0 136 aa16.41■□□□□ 0.22
RFFL-206ENST00000447669 SMIM13P0DJ93 91 aa16.41■□□□□ 0.22
RFFL-206ENST00000447669 SRSF9Q13242 221 aaKnown RBP eCLIP16.41■□□□□ 0.22
RFFL-206ENST00000447669 MEIG1Q5JSS6 88 aa16.41■□□□□ 0.22
RFFL-206ENST00000447669 USP17L23D6RBM5 183 aa16.4■□□□□ 0.22
RFFL-206ENST00000447669 TTC32Q5I0X7 151 aa16.4■□□□□ 0.22
RFFL-206ENST00000447669 GCSHP23434 173 aa16.4■□□□□ 0.22
RFFL-206ENST00000447669 ZNF561-AS1K7EIQ3 104 aa16.39■□□□□ 0.21
RFFL-206ENST00000447669 PFN2P35080 140 aa16.39■□□□□ 0.21
RFFL-206ENST00000447669 HSD52Q0P140 79 aa16.39■□□□□ 0.21
RFFL-206ENST00000447669 BVES-AS1Q5T3Y7 98 aa16.39■□□□□ 0.21
RFFL-206ENST00000447669 EIF4EBP3O60516 100 aaPredicted RBP16.38■□□□□ 0.21
RFFL-206ENST00000447669 NTN5Q8WTR8 489 aaPredicted RBP16.38■□□□□ 0.21
RFFL-206ENST00000447669 HYDINQ4G0P3 5121 aa16.38■□□□□ 0.21
RFFL-206ENST00000447669 PSCAO43653 123 aa16.38■□□□□ 0.21
RFFL-206ENST00000447669 HERV-K104P63124 156 aa16.38■□□□□ 0.21
RFFL-206ENST00000447669 FXYD2P54710 66 aa16.36■□□□□ 0.21
RFFL-206ENST00000447669 CEND1Q8N111 149 aa16.36■□□□□ 0.21
RFFL-206ENST00000447669 DNAH2Q9P225 4427 aa16.35■□□□□ 0.21
RFFL-206ENST00000447669 TMEM238C9JI98 176 aa16.35■□□□□ 0.21
RFFL-206ENST00000447669 M0R143 59 aa16.35■□□□□ 0.21
RFFL-206ENST00000447669 TM2D2Q9BX73 214 aa16.35■□□□□ 0.21
RFFL-206ENST00000447669 SPANXB1Q9NS25 103 aaPredicted RBP16.35■□□□□ 0.21
RFFL-206ENST00000447669 Q6ZR54 194 aa16.35■□□□□ 0.21
RFFL-206ENST00000447669 ALMS1Q8TCU4 4167 aa16.34■□□□□ 0.21
RFFL-206ENST00000447669 Q6ZRN7 208 aaPredicted RBP16.34■□□□□ 0.21
RFFL-206ENST00000447669 COX11Q9Y6N1 276 aa16.34■□□□□ 0.21
RFFL-206ENST00000447669 GVQW2A0A096LPI5 108 aaPredicted RBP16.33■□□□□ 0.21
RFFL-206ENST00000447669 LINC00158P58513 81 aa16.33■□□□□ 0.21
RFFL-206ENST00000447669 MUSTN1Q8IVN3 82 aa16.33■□□□□ 0.21
RFFL-206ENST00000447669 CAMK2N2Q96S95 79 aa16.33■□□□□ 0.21
RFFL-206ENST00000447669 ERG28Q9UKR5 140 aa16.33■□□□□ 0.21
RFFL-206ENST00000447669 SLPIP03973 132 aa16.33■□□□□ 0.2
RFFL-206ENST00000447669 CXCL5P42830 114 aa16.33■□□□□ 0.2
RFFL-206ENST00000447669 Q6ZRU5 148 aa16.33■□□□□ 0.2
RFFL-206ENST00000447669 C6orf48Q9UBA6 75 aa16.32■□□□□ 0.2
RFFL-206ENST00000447669 CIRBPQ14011 172 aaKnown RBP16.31■□□□□ 0.2
RFFL-206ENST00000447669 TIMM17BO60830 172 aa16.31■□□□□ 0.2
RFFL-206ENST00000447669 MIR7-3HGQ8N6C7 128 aa16.31■□□□□ 0.2
RFFL-206ENST00000447669 TAL2Q16559 108 aa16.29■□□□□ 0.2
RFFL-206ENST00000447669 SPANXDQ9BXN6 97 aa16.29■□□□□ 0.2
RFFL-206ENST00000447669 SPANXCQ9NY87 97 aa16.29■□□□□ 0.2
RFFL-206ENST00000447669 SOSTDC1Q6X4U4 206 aa16.29■□□□□ 0.2
RFFL-206ENST00000447669 PTTG1IPP53801 180 aa16.28■□□□□ 0.2
RFFL-206ENST00000447669 SFTA2Q6UW10 78 aa16.27■□□□□ 0.2
RFFL-206ENST00000447669 DNAH6Q9C0G6 4158 aa16.26■□□□□ 0.19
RFFL-206ENST00000447669 LINC00308Q8TCZ7 52 aa16.26■□□□□ 0.19
RFFL-206ENST00000447669 C2orf48Q96LS8 159 aa16.26■□□□□ 0.19
RFFL-206ENST00000447669 K7ERJ3 54 aa16.25■□□□□ 0.19
RFFL-206ENST00000447669 LRCOL1A6NCL2 159 aa16.24■□□□□ 0.19
RFFL-206ENST00000447669 SYCNQ0VAF6 134 aa16.24■□□□□ 0.19
RFFL-206ENST00000447669 NHP2Q9NX24 153 aaKnown RBP16.24■□□□□ 0.19
RFFL-206ENST00000447669 A4D1N5 150 aa16.23■□□□□ 0.19
RFFL-206ENST00000447669 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.23■□□□□ 0.19
RFFL-206ENST00000447669 Q6ZVH6 145 aa16.22■□□□□ 0.19
RFFL-206ENST00000447669 SACSQ9NZJ4 4579 aa16.2■□□□□ 0.18
RFFL-206ENST00000447669 C1orf134Q5TEV5 83 aa16.19■□□□□ 0.18
RFFL-206ENST00000447669 CARD19Q96LW7 228 aa16.19■□□□□ 0.18
RFFL-206ENST00000447669 TRBV30A0A0K0K1B3 111 aa16.19■□□□□ 0.18
RFFL-206ENST00000447669 COX17Q14061 63 aa16.18■□□□□ 0.18
RFFL-206ENST00000447669 RAB37Q96AX2 223 aa16.18■□□□□ 0.18
RFFL-206ENST00000447669 CFC1BP0CG36 223 aa16.17■□□□□ 0.18
RFFL-206ENST00000447669 CFC1P0CG37 223 aa16.17■□□□□ 0.18
RFFL-206ENST00000447669 FUSP35637 526 aaKnown RBP eCLIP16.17■□□□□ 0.18
RFFL-206ENST00000447669 RPL24P83731 157 aaKnown RBP16.17■□□□□ 0.18
RFFL-206ENST00000447669 SND1-IT1Q9HBX3 110 aa16.17■□□□□ 0.18
RFFL-206ENST00000447669 FRAS1Q86XX4 4008 aa16.17■□□□□ 0.18
RFFL-206ENST00000447669 IFITM1P13164 125 aa16.16■□□□□ 0.18
RFFL-206ENST00000447669 XAGE1AQ9HD64 81 aa16.16■□□□□ 0.18
RFFL-206ENST00000447669 COL5A1-AS1Q5SY13 56 aa16.14■□□□□ 0.17
RFFL-206ENST00000447669 Q6ZRP5 223 aa16.14■□□□□ 0.17
RFFL-206ENST00000447669 A6NDN8 102 aa16.14■□□□□ 0.17
RFFL-206ENST00000447669 GAGE2EQ4V326 116 aa16.14■□□□□ 0.17
RFFL-206ENST00000447669 GAGE2DQ9UEU5 116 aa16.14■□□□□ 0.17
RFFL-206ENST00000447669 Q8NDZ9 215 aa16.13■□□□□ 0.17
RFFL-206ENST00000447669 NAA38Q9BRA0 125 aaKnown RBP16.12■□□□□ 0.17
RFFL-206ENST00000447669 A0A087WTM6 91 aa16.12■□□□□ 0.17
RFFL-206ENST00000447669 LINC01620Q4KN68 170 aa16.12■□□□□ 0.17
RFFL-206ENST00000447669 TMEM238LA0A1B0GVL6 79 aa16.11■□□□□ 0.17
RFFL-206ENST00000447669 A6NJY4 79 aa16.11■□□□□ 0.17
RFFL-206ENST00000447669 F8WDY8 70 aa16.11■□□□□ 0.17
RFFL-206ENST00000447669 PRR3P79522 188 aaKnown RBP16.11■□□□□ 0.17
RFFL-206ENST00000447669 DNAH17Q9UFH2 4485 aa16.11■□□□□ 0.17
RFFL-206ENST00000447669 TAX1BP3O14907 124 aa16.11■□□□□ 0.17
RFFL-206ENST00000447669 NDUFC2-KCTD14E9PQ53 114 aa16.1■□□□□ 0.17
RFFL-206ENST00000447669 RPL18AQ02543 176 aaKnown RBP16.09■□□□□ 0.17
RFFL-206ENST00000447669 A0A1B0GWB2 263 aa16.09■□□□□ 0.17
RFFL-206ENST00000447669 Q8N814 137 aa16.09■□□□□ 0.17
RFFL-206ENST00000447669 HECTD4Q9Y4D8 3996 aa16.09■□□□□ 0.17
RFFL-206ENST00000447669 KMT2CQ8NEZ4 4911 aaKnown RBP16.08■□□□□ 0.16
RFFL-206ENST00000447669 RTL8CO15255 209 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms