RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 LINC00242Q5T6M2 205 aa9.24□□□□□ -0.93
SREBF1-207ENST00000447641 CHCHD10Q8WYQ3 142 aaPredicted RBP9.24□□□□□ -0.93
SREBF1-207ENST00000447641 DNAH8Q96JB1 4490 aa9.23□□□□□ -0.93
SREBF1-207ENST00000447641 PCP4L1A6NKN8 68 aa9.23□□□□□ -0.93
SREBF1-207ENST00000447641 HNRNPA3P51991 378 aaKnown RBP9.23□□□□□ -0.93
SREBF1-207ENST00000447641 MAJINQ3KP22 176 aa9.23□□□□□ -0.93
SREBF1-207ENST00000447641 C14orf177Q52M58 125 aa9.23□□□□□ -0.93
SREBF1-207ENST00000447641 HMCN2Q8NDA2 5059 aa9.23□□□□□ -0.93
SREBF1-207ENST00000447641 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 IGHV1-58A0A0C4DH39 117 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 IGKV3OR2-268A0A0C4DH90 116 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 GAGE12HA6NDE8 117 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 GCSHP23434 173 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 KRTAP10-1P60331 282 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 FOXI1Q12951 378 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 ANKRD39Q53RE8 183 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 BOD1L2Q8IYS8 172 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 C14orf144Q96I85 54 aa9.22□□□□□ -0.93
SREBF1-207ENST00000447641 UBR4Q5T4S7 5183 aa9.21□□□□□ -0.93
SREBF1-207ENST00000447641 J3QQQ9 107 aa9.21□□□□□ -0.94
SREBF1-207ENST00000447641 CD164L2Q6UWJ8 174 aa9.21□□□□□ -0.94
SREBF1-207ENST00000447641 MYMXA0A1B0GTQ4 84 aa9.2□□□□□ -0.94
SREBF1-207ENST00000447641 APOMO95445 188 aa9.2□□□□□ -0.94
SREBF1-207ENST00000447641 CDKN2A-AS1Q9UH64 79 aa9.2□□□□□ -0.94
SREBF1-207ENST00000447641 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
SREBF1-207ENST00000447641 A0A087WZ39 114 aa9.19□□□□□ -0.94
SREBF1-207ENST00000447641 ZNF815PA8K554 130 aa9.19□□□□□ -0.94
SREBF1-207ENST00000447641 COX7A2LO14548 114 aa9.19□□□□□ -0.94
SREBF1-207ENST00000447641 LINC00587B1AMM8 73 aa9.18□□□□□ -0.94
SREBF1-207ENST00000447641 MALP21145 153 aa9.18□□□□□ -0.94
SREBF1-207ENST00000447641 XCL1P47992 114 aa9.18□□□□□ -0.94
SREBF1-207ENST00000447641 SCGB1D4Q6XE38 83 aa9.18□□□□□ -0.94
SREBF1-207ENST00000447641 C15orf56Q8N910 161 aa9.18□□□□□ -0.94
SREBF1-207ENST00000447641 HIGD1BQ9P298 99 aa9.18□□□□□ -0.94
SREBF1-207ENST00000447641 SRRM2Q9UQ35 2752 aaKnown RBP9.17□□□□□ -0.94
SREBF1-207ENST00000447641 IGHV3OR16-9A0A0B4J2B5 98 aa9.17□□□□□ -0.94
SREBF1-207ENST00000447641 M0R143 59 aa9.17□□□□□ -0.94
SREBF1-207ENST00000447641 PRSS2P07478 247 aa9.17□□□□□ -0.94
SREBF1-207ENST00000447641 HERV-K104P63124 156 aa9.17□□□□□ -0.94
SREBF1-207ENST00000447641 CFAP161Q6P656 301 aa9.17□□□□□ -0.94
SREBF1-207ENST00000447641 FLG2Q5D862 2391 aaPredicted RBP9.16□□□□□ -0.94
SREBF1-207ENST00000447641 IGLV5-39A0A0G2JS06 123 aa9.16□□□□□ -0.94
SREBF1-207ENST00000447641 SLPIP03973 132 aa9.16□□□□□ -0.94
SREBF1-207ENST00000447641 SPINK8P0C7L1 97 aa9.16□□□□□ -0.94
SREBF1-207ENST00000447641 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
SREBF1-207ENST00000447641 CIRBPQ14011 172 aaKnown RBP9.16□□□□□ -0.94
SREBF1-207ENST00000447641 COPS9Q8WXC6 57 aa9.16□□□□□ -0.94
SREBF1-207ENST00000447641 GVQW2A0A096LPI5 108 aaPredicted RBP9.15□□□□□ -0.94
SREBF1-207ENST00000447641 IGKV2D-26A0A0A0MRZ7 120 aa9.15□□□□□ -0.94
SREBF1-207ENST00000447641 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.94
SREBF1-207ENST00000447641 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
SREBF1-207ENST00000447641 CXCL5P42830 114 aa9.15□□□□□ -0.94
SREBF1-207ENST00000447641 XGP55808 180 aa9.15□□□□□ -0.94
SREBF1-207ENST00000447641 COX6A2Q02221 97 aa9.15□□□□□ -0.94
SREBF1-207ENST00000447641 Q6ZSA8 131 aa9.15□□□□□ -0.94
SREBF1-207ENST00000447641 PCP2Q8IVA1 136 aa9.15□□□□□ -0.94
SREBF1-207ENST00000447641 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
SREBF1-207ENST00000447641 INAFM2P0DMQ5 153 aa9.14□□□□□ -0.95
SREBF1-207ENST00000447641 TAL2Q16559 108 aa9.14□□□□□ -0.95
SREBF1-207ENST00000447641 C9orf163Q8N9P6 203 aa9.14□□□□□ -0.95
SREBF1-207ENST00000447641 FAM30AQ9NZY2 134 aa9.14□□□□□ -0.95
SREBF1-207ENST00000447641 NDUFA12Q9UI09 145 aa9.14□□□□□ -0.95
SREBF1-207ENST00000447641 IGHV3-64A0A075B6Q5 118 aa9.13□□□□□ -0.95
SREBF1-207ENST00000447641 NDUFA1O15239 70 aa9.13□□□□□ -0.95
SREBF1-207ENST00000447641 HSD52Q0P140 79 aa9.13□□□□□ -0.95
SREBF1-207ENST00000447641 LINC01620Q4KN68 170 aa9.13□□□□□ -0.95
SREBF1-207ENST00000447641 COX7B2Q8TF08 81 aa9.13□□□□□ -0.95
SREBF1-207ENST00000447641 FAT3Q8TDW7 4589 aa9.12□□□□□ -0.95
SREBF1-207ENST00000447641 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
SREBF1-207ENST00000447641 Q6ZVH6 145 aa9.12□□□□□ -0.95
SREBF1-207ENST00000447641 C5orf38Q86SI9 138 aa9.12□□□□□ -0.95
SREBF1-207ENST00000447641 Q8IZM0 81 aa9.12□□□□□ -0.95
SREBF1-207ENST00000447641 F8WDY8 70 aa9.11□□□□□ -0.95
SREBF1-207ENST00000447641 TIMM17BO60830 172 aa9.11□□□□□ -0.95
SREBF1-207ENST00000447641 CTAG1AP78358 180 aa9.11□□□□□ -0.95
SREBF1-207ENST00000447641 LBHQ53QV2 105 aaPredicted RBP9.11□□□□□ -0.95
SREBF1-207ENST00000447641 C6orf226Q5I0X4 101 aa9.11□□□□□ -0.95
SREBF1-207ENST00000447641 Q5VSD8 79 aa9.11□□□□□ -0.95
SREBF1-207ENST00000447641 TMEM238LA0A1B0GVL6 79 aa9.1□□□□□ -0.95
SREBF1-207ENST00000447641 A6NJY4 79 aa9.1□□□□□ -0.95
SREBF1-207ENST00000447641 CKS1BP61024 79 aa9.1□□□□□ -0.95
SREBF1-207ENST00000447641 SRSF9Q13242 221 aaKnown RBP eCLIP9.1□□□□□ -0.95
SREBF1-207ENST00000447641 HIGD2BQ4VC39 106 aa9.1□□□□□ -0.95
SREBF1-207ENST00000447641 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
SREBF1-207ENST00000447641 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
SREBF1-207ENST00000447641 TOMM7Q9P0U1 55 aa9.1□□□□□ -0.95
SREBF1-207ENST00000447641 ORAOV1Q8WV07 137 aa9.09□□□□□ -0.95
SREBF1-207ENST00000447641 SPANXB1Q9NS25 103 aaPredicted RBP9.09□□□□□ -0.95
SREBF1-207ENST00000447641 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
SREBF1-207ENST00000447641 TSPEAR-AS2P59090 65 aa9.08□□□□□ -0.96
SREBF1-207ENST00000447641 C2orf91Q6ZV80 131 aa9.08□□□□□ -0.96
SREBF1-207ENST00000447641 A0A0J9YXY3 114 aa9.07□□□□□ -0.96
SREBF1-207ENST00000447641 A6NDN8 102 aa9.07□□□□□ -0.96
SREBF1-207ENST00000447641 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
SREBF1-207ENST00000447641 IFITM1P13164 125 aa9.06□□□□□ -0.96
SREBF1-207ENST00000447641 MEIG1Q5JSS6 88 aa9.06□□□□□ -0.96
SREBF1-207ENST00000447641 LINC00526Q96FQ7 95 aa9.06□□□□□ -0.96
SREBF1-207ENST00000447641 TTTY13Q9BZ97 58 aa9.06□□□□□ -0.96
SREBF1-207ENST00000447641 PTTG1IPP53801 180 aa9.05□□□□□ -0.96
SREBF1-207ENST00000447641 RPL24P83731 157 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms