RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 AKAP14Q86UN6 197 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 WFDC13Q8IUB5 93 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 MYOZ3Q8TDC0 251 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 DPH3Q96FX2 82 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 NXT2Q9NPJ8 142 aaKnown RBP-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 ARL2-SNX15V9GYD0 113 aa-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.98□□□□□ -2.573e-62■■■■■ 70.1
SNHG3-203ENST00000447507 XRN1Q8IZH2 1706 aaKnown RBP-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 COL14A1Q05707 1796 aaKnown RBP-0.98□□□□□ -2.57
SNHG3-203ENST00000447507 PLEKHH2Q8IVE3 1493 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 ACACAQ13085 2346 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 SHROOM2Q13796 1616 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 CICQ96RK0 1608 aaPredicted RBP-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 TRANK1O15050 2925 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 I3L3M4 83 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 GUCA1AP43080 201 aaPredicted RBP-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 CKS1BP61024 79 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 SEC11AP67812 179 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 SFTA2Q6UW10 78 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 SMIM15Q7Z3B0 74 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 TSTD1Q8NFU3 115 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 FAM167A-AS1Q96KT0 104 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 MRPL34Q9BQ48 92 aaKnown RBP-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 PDCD10Q9BUL8 212 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 TMEM191AQ9H0A3 160 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 TPT1P8Q9HAU6 139 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 FAIMQ9NVQ4 179 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 V9GYQ6 96 aa-0.99□□□□□ -2.57
SNHG3-203ENST00000447507 ITPR1Q14643 2758 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 A0A0G2JMZ2 1700 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 J3QR89 54 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 RPS25P62851 125 aaKnown RBP-1□□□□□ -2.57
SNHG3-203ENST00000447507 MT1HP80294 61 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 CDC42SE2Q9NRR3 84 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 TEX15Q9BXT5 2789 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 CPSF1Q10570 1443 aaKnown RBP-1□□□□□ -2.57
SNHG3-203ENST00000447507 NCOA3Q9Y6Q9 1424 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 ADGRL2O95490 1459 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 ROBO1Q9Y6N7 1651 aa-1□□□□□ -2.57
SNHG3-203ENST00000447507 MTORP42345 2549 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 A0A1B0GU69 56 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 LOC285095A0A1B0GVY8 99 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 GNG14A0A1W2PPG7 69 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 FAM223BA6NKX1 122 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 COPZ1P61923 177 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 PRO1933Q9H354 126 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 CFTRP13569 1480 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 EHBP1L1Q8N3D4 1523 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 PKD1L2Q7Z442 2459 aa-1.01□□□□□ -2.57
SNHG3-203ENST00000447507 MYO15AQ9UKN7 3530 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 TRAV30A0A087WSZ9 112 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 A0A087WVE0 104 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 MIF4GDA9UHW6 222 aaKnown RBP-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 SCGB1A1P11684 91 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 S100A5P33763 92 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 BTG2P78543 158 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 SMCO1Q147U7 214 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 NUP188Q5SRE5 1749 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 C12orf73Q69YU5 71 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 SELENOSQ9BQE4 189 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 SPANXDQ9BXN6 97 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 SPANXCQ9NY87 97 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 GSKIPQ9P0R6 139 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 ANKRD50Q9ULJ7 1429 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 SERP1Q9Y6X1 66 aa-1.02□□□□□ -2.57
SNHG3-203ENST00000447507 MBD5Q9P267 1494 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 SMG6Q86US8 1419 aaKnown RBP-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 PIGBOS1A0A0B4J2F0 54 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 A0A1B0GWA3 101 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 C9orf92A6NGG3 77 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 H0YAA0 97 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 B2MP61769 119 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 HSD52Q0P140 79 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 WHAMMP3Q1A5X7 153 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 C6orf201Q7Z4U5 140 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 CDKN2A-AS1Q9UH64 79 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 MYH7P12883 1935 aa-1.03□□□□□ -2.57
SNHG3-203ENST00000447507 GRIN2AQ12879 1464 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 CCDC141Q6ZP82 1450 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 SNCAP37840 140 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 DR1Q01658 176 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 COMMD6Q7Z4G1 85 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 TCEAL4Q96EI5 215 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 RERGLQ9H628 205 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 MANBALQ9NQG1 85 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 UQCR10Q9UDW1 63 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 S4R3F8 94 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 PDE4DIPQ5VU43 2346 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 PHLPP1O60346 1717 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 QRICH2Q9H0J4 1663 aa-1.04□□□□□ -2.58
SNHG3-203ENST00000447507 EDC4Q6P2E9 1401 aaKnown RBP-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 CCL22O00626 93 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 Q0VG73 95 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 CATR1Q13166 79 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 KRTAP19-5Q3LI72 72 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 MEIG1Q5JSS6 88 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 C5orf38Q86SI9 138 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 DEFB107AQ8IZN7 70 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 SPANXA1Q9NS26 97 aa-1.05□□□□□ -2.58
SNHG3-203ENST00000447507 CCDC167Q9P0B6 97 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 1259.2 ms