RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 LHFPL1Q86WI0 220 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 FAM19A2Q8N3H0 131 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 FAM19A4Q96LR4 140 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 SCGB3A2Q96PL1 93 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 GNB1LQ9BYB4 327 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 CKLFQ9UBR5 152 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 Q9UF83 564 aa2.92□□□□□ -1.94
SDCBP-205ENST00000447267 A0A087X002 238 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 A0A0A6YYD4 124 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 TRAV13-1A0A0B4J241 112 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 TRBV7-7A0A0K0K1E9 115 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 SNURFLB1AK76 121 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 USP17L23D6RBM5 183 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 UPK2O00526 184 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 P01737 135 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 IGHV3-53P01767 116 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 GATA1P15976 413 aaPredicted RBP2.91□□□□□ -1.94
SDCBP-205ENST00000447267 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 ZNF493Q6ZR52 646 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 Q6ZTI0 123 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 MRPL55Q7Z7F7 128 aaKnown RBP2.91□□□□□ -1.94
SDCBP-205ENST00000447267 TMEM263Q8WUH6 116 aaKnown RBP2.91□□□□□ -1.94
SDCBP-205ENST00000447267 AGPAT4-IT1Q9H0P7 198 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 NDUFA4L2Q9NRX3 87 aa2.91□□□□□ -1.94
SDCBP-205ENST00000447267 TEX50A0A1B0GTY4 177 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 J3QLW9 94 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 K7ERJ3 54 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 COX7CP15954 63 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 HERV-K104P61576 105 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 RPS11P62280 158 aaKnown RBP eCLIP2.9□□□□□ -1.95
SDCBP-205ENST00000447267 PRCDQ00LT1 54 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 LAGE3Q14657 143 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 ASB16-AS1Q495Z4 193 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 PHLDA2Q53GA4 152 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 Q6ZS49 121 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 CEND1Q8N111 149 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 TMEM230Q96A57 120 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 DSCR8Q96T75 97 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 SHANK2-AS3Q9BTD1 123 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 SLC39A9Q9NUM3 307 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 IL36BQ9NZH7 164 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 MRPL36Q9P0J6 103 aaKnown RBP2.9□□□□□ -1.95
SDCBP-205ENST00000447267 HHLA3Q9XRX5 114 aa2.9□□□□□ -1.95
SDCBP-205ENST00000447267 TRAV8-2A0A0B4J237 113 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 SMIM1B2RUZ4 78 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 K7EQD1 137 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 FXYD2P54710 66 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 SUPT4H1P63272 117 aaKnown RBP2.89□□□□□ -1.95
SDCBP-205ENST00000447267 PCP2Q8IVA1 136 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 AMN1Q8IY45 258 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 C9orf163Q8N9P6 203 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 NUP35Q8NFH5 326 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 BRK1Q8WUW1 75 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 ODF3Q96PU9 254 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 OTORQ9NRC9 128 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 HIGD1BQ9P298 99 aa2.89□□□□□ -1.95
SDCBP-205ENST00000447267 TRGV2A0A075B6R0 118 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 IGKV1OR2-108A0A075B7D4 117 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 TRAV8-1A0A0A6YYK1 113 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 TRAV8-4A0A0B4J246 113 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 IGKV1D-13A0A0B4J2D9 117 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 hADV29S1A0JD25 119 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 A8MWV9 139 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 H3BTX0 84 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 IGKV1-17P01599 117 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 IGKCP01834 107 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 HLA-DQA1P01909 254 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 IGKV1-13P0DP09 117 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 PYYP10082 97 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 LINC01545Q5VT33 79 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 PQLC2Q6ZP29 291 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 IMUPQ9GZP8 106 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 NHP2Q9NX24 153 aaKnown RBP2.88□□□□□ -1.95
SDCBP-205ENST00000447267 PLAC8Q9NZF1 115 aa2.88□□□□□ -1.95
SDCBP-205ENST00000447267 IGKV2D-24A0A075B6R9 120 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 IGLV5-45A0A087WSX0 123 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 SMIM26A0A096LP01 95 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 IGHV1-24A0A0C4DH33 117 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 FAM240AA0A1B0GVK7 77 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 NDUFC2-KCTD14E9PQ53 114 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 VCYO14598 125 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 TCL1BO95988 128 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 OR5AL1P0C617 328 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 DAZ2Q13117 558 aaKnown RBP2.87□□□□□ -1.95
SDCBP-205ENST00000447267 ZNF726P1Q15940 193 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 TPRXLQ17RH7 258 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 DAZ4Q86SG3 579 aaKnown RBP2.87□□□□□ -1.95
SDCBP-205ENST00000447267 FMC1Q96HJ9 113 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 C11orf1Q9H5F2 150 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 DAZ3Q9NR90 486 aaKnown RBP2.87□□□□□ -1.95
SDCBP-205ENST00000447267 LINC00846Q9NV44 126 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 PRO0255Q9UI72 69 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 SERP1Q9Y6X1 66 aa2.87□□□□□ -1.95
SDCBP-205ENST00000447267 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
SDCBP-205ENST00000447267 IGLV7-46A0A075B6I9 117 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 TRBV5-5A0A0J9YX44 114 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 LEPROTL1O95214 131 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 TSHBP01222 138 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms