RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 MRPS36P82909 103 aaKnown RBP3.35□□□□□ -1.87
HMGN1P36-201ENST00000446623 MRPL51Q4U2R6 128 aaKnown RBP3.35□□□□□ -1.87
HMGN1P36-201ENST00000446623 LBHQ53QV2 105 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P36-201ENST00000446623 LINC00469Q8N7U9 141 aa3.35□□□□□ -1.87
HMGN1P36-201ENST00000446623 LINC00304Q8N9R0 145 aa3.35□□□□□ -1.87
HMGN1P36-201ENST00000446623 PACRGQ96M98 296 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P36-201ENST00000446623 SPANXA1Q9NS26 97 aa3.35□□□□□ -1.87
HMGN1P36-201ENST00000446623 TRBV24-1A0A075B6N3 115 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 TMEM250H0YL14 139 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 MT3P25713 68 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 LINC01547P58512 204 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 RPL32P62910 135 aaKnown RBP3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 RIGQ13278 110 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 RGS21Q2M5E4 152 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 LINC00242Q5T6M2 205 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 LINC00173Q6ZV60 143 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 C20orf78Q9BR46 151 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 XAGE1AQ9HD64 81 aa3.34□□□□□ -1.87
HMGN1P36-201ENST00000446623 ZNF727A8MUV8 499 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 TCAPO15273 167 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 CEBPGP53567 150 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 FAM229BQ4G0N7 80 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 FAM104BQ5XKR9 115 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 MRPL55Q7Z7F7 128 aaKnown RBP3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 LINC01551Q86U37 167 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 SMIM2Q9BVW6 85 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 PPDPFQ9H3Y8 114 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 TP73-AS1Q9UF72 201 aa3.33□□□□□ -1.88
HMGN1P36-201ENST00000446623 LINC00862A6NCI5 91 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 CKS2P33552 79 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 CKS1BP61024 79 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 KRTAP13-1Q8IUC0 172 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 LINC01561Q8N1V8 128 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 SMIM7Q9BQ49 75 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 OSTCQ9NRP0 149 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 NAT8BQ9UHF3 227 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 V9GYV3 84 aa3.32□□□□□ -1.88
HMGN1P36-201ENST00000446623 IGLV5-37A0A075B6J1 123 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 IGLV4-3A0A075B6K6 122 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 IGKV2D-26A0A0A0MRZ7 120 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 GAGE10A6NGK3 116 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 RPL37AP8A6NKH3 93 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 IFI27P40305 119 aaPredicted RBP3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 ASB16-AS1Q495Z4 193 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 C6orf226Q5I0X4 101 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 SLC51BQ86UW2 128 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 LINC00167Q96N53 147 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 TOMM7Q9P0U1 55 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 PYGO1Q9Y3Y4 419 aa3.31□□□□□ -1.88
HMGN1P36-201ENST00000446623 A0A1B0GW15 77 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 D6R8Y8 96 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 NPYP01303 97 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 UBE2AP49459 152 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 CTAG1AP78358 180 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 ZC2HC1BQ5TFG8 222 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 Q6ZN92 141 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 TEX43Q6ZNM6 134 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 Q8IZM0 81 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 EIF5A2Q9GZV4 153 aaKnown RBP3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 BATF3Q9NR55 127 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 PAM16Q9Y3D7 125 aa3.3□□□□□ -1.88
HMGN1P36-201ENST00000446623 F8VRH5 84 aa3.29□□□□□ -1.88
HMGN1P36-201ENST00000446623 RAB5AP20339 215 aa3.29□□□□□ -1.88
HMGN1P36-201ENST00000446623 KRTAP13-3Q3SY46 172 aa3.29□□□□□ -1.88
HMGN1P36-201ENST00000446623 FAM74A3Q4VXF1 159 aa3.29□□□□□ -1.88
HMGN1P36-201ENST00000446623 LINC00337Q8N6G1 96 aa3.29□□□□□ -1.88
HMGN1P36-201ENST00000446623 C2orf88Q9BSF0 95 aa3.29□□□□□ -1.88
HMGN1P36-201ENST00000446623 ALKBH7Q9BT30 221 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P36-201ENST00000446623 SMIM27A0A1W2PRY6 76 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 PPBPP02775 128 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 PRLHP81277 87 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 PNRC1Q12796 327 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 MRPL54Q6P161 138 aaKnown RBP3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 FAM19A3Q7Z5A8 133 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 C3orf22Q8N5N4 141 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 AMELXQ99217 191 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 VCX2Q9H322 139 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 CDKN2A-AS1Q9UH64 79 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 USH2AO75445 5202 aa3.28□□□□□ -1.88
HMGN1P36-201ENST00000446623 IGKV2-28A0A075B6P5 120 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 A0A1B0GXF2 115 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 F8W036 122 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 SCO1O75880 301 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 IGKV2D-28P01615 120 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 S100A8P05109 93 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 SRP19P09132 144 aaKnown RBP3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 RPL23P62829 140 aaKnown RBP3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 HERVK_113P63121 156 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 ADIRFQ15847 76 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 ALKAL2Q6UX46 152 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 ORMDL3Q8N138 153 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 NKAPP1Q8N9T2 125 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 PRELID3AQ96N28 172 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 CYSLTR1Q9Y271 337 aa3.27□□□□□ -1.89
HMGN1P36-201ENST00000446623 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms