RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 LOC389332A0A1B0GUA5 103 aa6.98□□□□□ -1.29
CDCA3-203ENST00000446553 G0S2P27469 103 aa6.98□□□□□ -1.29
CDCA3-203ENST00000446553 TEX43Q6ZNM6 134 aa6.98□□□□□ -1.29
CDCA3-203ENST00000446553 FAM19A3Q7Z5A8 133 aa6.98□□□□□ -1.29
CDCA3-203ENST00000446553 AMELXQ99217 191 aa6.98□□□□□ -1.29
CDCA3-203ENST00000446553 A0A0J9YXV3 536 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 TRBV30A0A0K0K1B3 111 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 C5orf52A6NGY3 159 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 SERF1AO75920 110 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 UBE2D1P51668 147 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 RPL18AQ02543 176 aaKnown RBP6.97□□□□□ -1.29
CDCA3-203ENST00000446553 KIAA0087Q14695 138 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 PAPPA-AS1Q5QFB9 102 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 C2orf66Q6UXQ4 117 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 Q6ZN92 141 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
CDCA3-203ENST00000446553 IGIPA6NJ69 53 aa6.96□□□□□ -1.3
CDCA3-203ENST00000446553 SNRPEP62304 92 aaKnown RBP6.96□□□□□ -1.3
CDCA3-203ENST00000446553 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.3
CDCA3-203ENST00000446553 PACRGQ96M98 296 aaPredicted RBP6.96□□□□□ -1.3
CDCA3-203ENST00000446553 VCX2Q9H322 139 aa6.96□□□□□ -1.3
CDCA3-203ENST00000446553 LINC01549A6NIU2 74 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 HSBP1O75506 76 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 LINC00310P59036 64 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 SEC11AP67812 179 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 ODF1Q14990 250 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 URB1-AS1Q96HZ7 61 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 TIMM17AQ99595 171 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 C6orf48Q9UBA6 75 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
CDCA3-203ENST00000446553 NUPR1O60356 82 aa6.94□□□□□ -1.3
CDCA3-203ENST00000446553 S100A2P29034 98 aa6.94□□□□□ -1.3
CDCA3-203ENST00000446553 LRP2P98164 4655 aa6.93□□□□□ -1.3
CDCA3-203ENST00000446553 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
CDCA3-203ENST00000446553 HERVK_113P63121 156 aa6.93□□□□□ -1.3
CDCA3-203ENST00000446553 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
CDCA3-203ENST00000446553 TOMM6Q96B49 74 aa6.93□□□□□ -1.3
CDCA3-203ENST00000446553 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
CDCA3-203ENST00000446553 Q8IZM0 81 aa6.92□□□□□ -1.3
CDCA3-203ENST00000446553 HBDP02042 147 aa6.91□□□□□ -1.3
CDCA3-203ENST00000446553 ERASQ7Z444 233 aa6.91□□□□□ -1.3
CDCA3-203ENST00000446553 HIST1H2BLQ99880 126 aa6.91□□□□□ -1.3
CDCA3-203ENST00000446553 HSPB8Q9UJY1 196 aa6.91□□□□□ -1.3
CDCA3-203ENST00000446553 PRSS2P07478 247 aa6.9□□□□□ -1.3
CDCA3-203ENST00000446553 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.3
CDCA3-203ENST00000446553 C1orf137Q5JT78 98 aa6.9□□□□□ -1.3
CDCA3-203ENST00000446553 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
CDCA3-203ENST00000446553 A0A096LNJ9 63 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 IGLV7-43P04211 117 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 CXCL5P42830 114 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 PMCHL1Q16048 86 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 GAGE2EQ4V326 116 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 ZC2HC1BQ5TFG8 222 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 C2orf82Q6UX34 121 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 DIRC1Q969H9 104 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 GAGE2DQ9UEU5 116 aa6.89□□□□□ -1.31
CDCA3-203ENST00000446553 FAM168BA1KXE4 195 aa6.88□□□□□ -1.31
CDCA3-203ENST00000446553 ATP5LO75964 103 aa6.88□□□□□ -1.31
CDCA3-203ENST00000446553 LEPROTL1O95214 131 aa6.88□□□□□ -1.31
CDCA3-203ENST00000446553 FABP4P15090 132 aa6.88□□□□□ -1.31
CDCA3-203ENST00000446553 CKS1BP61024 79 aa6.88□□□□□ -1.31
CDCA3-203ENST00000446553 KRTAP7-1Q8IUC3 87 aa6.88□□□□□ -1.31
CDCA3-203ENST00000446553 SCGB3A1Q96QR1 104 aa6.88□□□□□ -1.31
CDCA3-203ENST00000446553 GEMIN7Q9H840 131 aaKnown RBP6.88□□□□□ -1.31
CDCA3-203ENST00000446553 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
CDCA3-203ENST00000446553 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
CDCA3-203ENST00000446553 F8VRH5 84 aa6.87□□□□□ -1.31
CDCA3-203ENST00000446553 M0QXV9 152 aa6.87□□□□□ -1.31
CDCA3-203ENST00000446553 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
CDCA3-203ENST00000446553 FAM19A5Q7Z5A7 132 aaPredicted RBP6.87□□□□□ -1.31
CDCA3-203ENST00000446553 TINCRA0A1B0GVN0 87 aa6.86□□□□□ -1.31
CDCA3-203ENST00000446553 H0Y9J4 135 aa6.86□□□□□ -1.31
CDCA3-203ENST00000446553 KRTAP11-1Q8IUC1 163 aa6.86□□□□□ -1.31
CDCA3-203ENST00000446553 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
CDCA3-203ENST00000446553 IFI27L1Q96BM0 104 aa6.85□□□□□ -1.31
CDCA3-203ENST00000446553 MAP1LC3CQ9BXW4 147 aa6.85□□□□□ -1.31
CDCA3-203ENST00000446553 TP73-AS1Q9UF72 201 aa6.85□□□□□ -1.31
CDCA3-203ENST00000446553 RNF213Q63HN8 5207 aa6.85□□□□□ -1.31
CDCA3-203ENST00000446553 LOC105371267A0A1B0GV96 52 aa6.84□□□□□ -1.31
CDCA3-203ENST00000446553 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.31
CDCA3-203ENST00000446553 UBE2BP63146 152 aa6.84□□□□□ -1.31
CDCA3-203ENST00000446553 LINC00469Q8N7U9 141 aa6.84□□□□□ -1.31
CDCA3-203ENST00000446553 IGLV1-50A0A075B6I6 118 aa6.83□□□□□ -1.32
CDCA3-203ENST00000446553 AKR1D1P51857 326 aa6.83□□□□□ -1.32
CDCA3-203ENST00000446553 KRTDAPP60985 99 aa6.83□□□□□ -1.32
CDCA3-203ENST00000446553 PMVKQ15126 192 aa6.83□□□□□ -1.32
CDCA3-203ENST00000446553 LBHQ53QV2 105 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-203ENST00000446553 PET117Q6UWS5 81 aa6.83□□□□□ -1.32
CDCA3-203ENST00000446553 CST9LQ9H4G1 147 aa6.83□□□□□ -1.32
CDCA3-203ENST00000446553 C20orf202A1L168 122 aa6.82□□□□□ -1.32
CDCA3-203ENST00000446553 SYS1-DBNDD2H3BUS1 97 aa6.82□□□□□ -1.32
CDCA3-203ENST00000446553 C3orf79P0CE67 100 aa6.82□□□□□ -1.32
CDCA3-203ENST00000446553 COX7B2Q8TF08 81 aa6.82□□□□□ -1.32
CDCA3-203ENST00000446553 TRAV12-1A0A0B4J245 112 aa6.81□□□□□ -1.32
CDCA3-203ENST00000446553 KRTAP1-4P0C5Y4 121 aa6.81□□□□□ -1.32
CDCA3-203ENST00000446553 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms