RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
GARNL3-208ENST00000444677 SEC11AP67812 179 aa8.44□□□□□ -1.06
GARNL3-208ENST00000444677 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
GARNL3-208ENST00000444677 C6orf226Q5I0X4 101 aa8.44□□□□□ -1.06
GARNL3-208ENST00000444677 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
GARNL3-208ENST00000444677 FAM168BA1KXE4 195 aa8.43□□□□□ -1.06
GARNL3-208ENST00000444677 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-208ENST00000444677 SMIM1B2RUZ4 78 aa8.43□□□□□ -1.06
GARNL3-208ENST00000444677 HBDP02042 147 aa8.43□□□□□ -1.06
GARNL3-208ENST00000444677 PRSS2P07478 247 aa8.43□□□□□ -1.06
GARNL3-208ENST00000444677 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
GARNL3-208ENST00000444677 NDUFA6P56556 154 aa8.43□□□□□ -1.06
GARNL3-208ENST00000444677 PACRGQ96M98 296 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-208ENST00000444677 IGLV5-45A0A087WSX0 123 aa8.42□□□□□ -1.06
GARNL3-208ENST00000444677 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
GARNL3-208ENST00000444677 TRGC2P03986 189 aa8.42□□□□□ -1.06
GARNL3-208ENST00000444677 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
GARNL3-208ENST00000444677 RAB5BP61020 215 aa8.42□□□□□ -1.06
GARNL3-208ENST00000444677 PHF5AQ7RTV0 110 aaKnown RBP8.42□□□□□ -1.06
GARNL3-208ENST00000444677 Q8IZM0 81 aa8.42□□□□□ -1.06
GARNL3-208ENST00000444677 PRR3P79522 188 aaKnown RBP8.41□□□□□ -1.06
GARNL3-208ENST00000444677 KRTAP7-1Q8IUC3 87 aa8.41□□□□□ -1.06
GARNL3-208ENST00000444677 COLCA2A8K830 154 aa8.4□□□□□ -1.06
GARNL3-208ENST00000444677 CKS1BP61024 79 aa8.4□□□□□ -1.06
GARNL3-208ENST00000444677 SCO1O75880 301 aa8.39□□□□□ -1.07
GARNL3-208ENST00000444677 IGLC3P0DOY3 106 aa8.39□□□□□ -1.07
GARNL3-208ENST00000444677 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
GARNL3-208ENST00000444677 FAM19A5Q7Z5A7 132 aaPredicted RBP8.39□□□□□ -1.07
GARNL3-208ENST00000444677 BAGE3Q86Y29 109 aa8.39□□□□□ -1.07
GARNL3-208ENST00000444677 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
GARNL3-208ENST00000444677 NDUFC2-KCTD14E9PQ53 114 aa8.38□□□□□ -1.07
GARNL3-208ENST00000444677 ZNF22P17026 224 aaPredicted RBP8.38□□□□□ -1.07
GARNL3-208ENST00000444677 KRTAP11-1Q8IUC1 163 aa8.38□□□□□ -1.07
GARNL3-208ENST00000444677 FAM19A2Q8N3H0 131 aa8.38□□□□□ -1.07
GARNL3-208ENST00000444677 CHCHD1Q96BP2 118 aaKnown RBP8.38□□□□□ -1.07
GARNL3-208ENST00000444677 ATP5LO75964 103 aa8.37□□□□□ -1.07
GARNL3-208ENST00000444677 LINC00310P59036 64 aa8.37□□□□□ -1.07
GARNL3-208ENST00000444677 C11orf86A6NJI1 115 aa8.36□□□□□ -1.07
GARNL3-208ENST00000444677 F8VRH5 84 aa8.36□□□□□ -1.07
GARNL3-208ENST00000444677 NUPR1O60356 82 aa8.36□□□□□ -1.07
GARNL3-208ENST00000444677 OXTP01178 125 aa8.36□□□□□ -1.07
GARNL3-208ENST00000444677 XAGE1AQ9HD64 81 aa8.36□□□□□ -1.07
GARNL3-208ENST00000444677 H3BRM9 83 aa8.35□□□□□ -1.07
GARNL3-208ENST00000444677 PSORS1C2Q9UIG4 136 aa8.35□□□□□ -1.07
GARNL3-208ENST00000444677 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
GARNL3-208ENST00000444677 SERF1AO75920 110 aa8.34□□□□□ -1.07
GARNL3-208ENST00000444677 SRSF9Q13242 221 aaKnown RBP eCLIP8.34□□□□□ -1.07
GARNL3-208ENST00000444677 SERTAD4-AS1Q5TG53 156 aa8.34□□□□□ -1.07
GARNL3-208ENST00000444677 IFI27L1Q96BM0 104 aa8.34□□□□□ -1.07
GARNL3-208ENST00000444677 CHTOPQ9Y3Y2 248 aaKnown RBP8.34□□□□□ -1.07
GARNL3-208ENST00000444677 HSBP1O75506 76 aa8.33□□□□□ -1.08
GARNL3-208ENST00000444677 CXCL5P42830 114 aa8.33□□□□□ -1.08
GARNL3-208ENST00000444677 M0QXV9 152 aa8.32□□□□□ -1.08
GARNL3-208ENST00000444677 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
GARNL3-208ENST00000444677 TMEM170BQ5T4T1 132 aa8.32□□□□□ -1.08
GARNL3-208ENST00000444677 TRAV12-1A0A0B4J245 112 aa8.31□□□□□ -1.08
GARNL3-208ENST00000444677 C1orf137Q5JT78 98 aa8.31□□□□□ -1.08
GARNL3-208ENST00000444677 C22orf24Q9Y442 160 aa8.3□□□□□ -1.08
GARNL3-208ENST00000444677 H0Y8G0 127 aa8.29□□□□□ -1.08
GARNL3-208ENST00000444677 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
GARNL3-208ENST00000444677 ZNF625Q96I27 306 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-208ENST00000444677 TMEM223A0PJW6 202 aa8.28□□□□□ -1.08
GARNL3-208ENST00000444677 FABP4P15090 132 aa8.28□□□□□ -1.08
GARNL3-208ENST00000444677 PFN2P35080 140 aa8.28□□□□□ -1.08
GARNL3-208ENST00000444677 UBE2BP63146 152 aa8.28□□□□□ -1.08
GARNL3-208ENST00000444677 LEPROTL1O95214 131 aa8.27□□□□□ -1.09
GARNL3-208ENST00000444677 ODF1Q14990 250 aa8.27□□□□□ -1.09
GARNL3-208ENST00000444677 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
GARNL3-208ENST00000444677 TNXBP22105 4242 aa8.26□□□□□ -1.09
GARNL3-208ENST00000444677 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
GARNL3-208ENST00000444677 ERG28Q9UKR5 140 aa8.25□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BKO60814 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BJP06899 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BOP23527 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BBP33778 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BDP58876 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BCP62807 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST2H2BEQ16778 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BHQ93079 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 LINC01600Q96MT4 127 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BNQ99877 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HIST1H2BMQ99879 126 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 HMCN2Q8NDA2 5059 aa8.24□□□□□ -1.09
GARNL3-208ENST00000444677 A0A0U1RRA0 63 aa8.23□□□□□ -1.09
GARNL3-208ENST00000444677 GAGE10A6NGK3 116 aa8.23□□□□□ -1.09
GARNL3-208ENST00000444677 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
GARNL3-208ENST00000444677 LBHQ53QV2 105 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-208ENST00000444677 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
GARNL3-208ENST00000444677 Q8NDZ9 215 aa8.22□□□□□ -1.09
GARNL3-208ENST00000444677 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
GARNL3-208ENST00000444677 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
GARNL3-208ENST00000444677 PLA2G2DQ9UNK4 145 aa8.22□□□□□ -1.09
GARNL3-208ENST00000444677 RPL37AP8A6NKH3 93 aa8.21□□□□□ -1.1
GARNL3-208ENST00000444677 KRTAP10-8P60410 259 aa8.21□□□□□ -1.1
GARNL3-208ENST00000444677 REG3GQ6UW15 175 aa8.21□□□□□ -1.1
GARNL3-208ENST00000444677 TP73-AS1Q9UF72 201 aa8.21□□□□□ -1.1
GARNL3-208ENST00000444677 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
GARNL3-208ENST00000444677 TSPEAR-AS2P59090 65 aa8.2□□□□□ -1.1
GARNL3-208ENST00000444677 SMIM13P0DJ93 91 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms