RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 NDUFC2-KCTD14E9PQ53 114 aa5.42□□□□□ -1.54
HDAC8-215ENST00000444609 MT2AP02795 61 aa5.42□□□□□ -1.54
HDAC8-215ENST00000444609 RPL35P42766 123 aaKnown RBP5.42□□□□□ -1.54
HDAC8-215ENST00000444609 RPL23P62829 140 aaKnown RBP5.42□□□□□ -1.54
HDAC8-215ENST00000444609 LINC00587B1AMM8 73 aa5.41□□□□□ -1.54
HDAC8-215ENST00000444609 PEX7O00628 323 aa5.41□□□□□ -1.54
HDAC8-215ENST00000444609 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
HDAC8-215ENST00000444609 UBE2AP49459 152 aa5.41□□□□□ -1.54
HDAC8-215ENST00000444609 FABP9Q0Z7S8 132 aa5.41□□□□□ -1.54
HDAC8-215ENST00000444609 ADIRFQ15847 76 aa5.41□□□□□ -1.54
HDAC8-215ENST00000444609 PACRGQ96M98 296 aaPredicted RBP5.41□□□□□ -1.54
HDAC8-215ENST00000444609 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
HDAC8-215ENST00000444609 TMEM167BQ9NRX6 74 aa5.41□□□□□ -1.54
HDAC8-215ENST00000444609 TGIF2-C20orf24A0A0A6YYL0 155 aa5.4□□□□□ -1.54
HDAC8-215ENST00000444609 CST9LP1Q5W188 147 aa5.4□□□□□ -1.54
HDAC8-215ENST00000444609 Q8N377 158 aa5.4□□□□□ -1.54
HDAC8-215ENST00000444609 ORAOV1Q8WV07 137 aa5.4□□□□□ -1.54
HDAC8-215ENST00000444609 C11orf52Q96A22 123 aa5.4□□□□□ -1.54
HDAC8-215ENST00000444609 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
HDAC8-215ENST00000444609 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
HDAC8-215ENST00000444609 TRAV9-1A0A075B6T8 112 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 A0A1W2PRE2 83 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 TRGC2P03986 189 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 NDUFA6P56556 154 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 SMIM15Q7Z3B0 74 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 MRPL55Q7Z7F7 128 aaKnown RBP5.39□□□□□ -1.55
HDAC8-215ENST00000444609 LINC01551Q86U37 167 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 FAM19A2Q8N3H0 131 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 Q8NBF4 154 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 TP73-AS1Q9UF72 201 aa5.39□□□□□ -1.55
HDAC8-215ENST00000444609 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BKO60814 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 MT1FP04733 61 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BJP06899 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 LINC00614P0C842 121 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BOP23527 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BBP33778 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BDP58876 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 UBE2G2P60604 165 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BCP62807 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST2H2BEQ16778 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.38□□□□□ -1.55
HDAC8-215ENST00000444609 MRPL52Q86TS9 123 aaKnown RBP5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BHQ93079 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BNQ99877 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 HIST1H2BMQ99879 126 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
HDAC8-215ENST00000444609 RPL37AP8A6NKH3 93 aa5.37□□□□□ -1.55
HDAC8-215ENST00000444609 LTAP01374 205 aa5.37□□□□□ -1.55
HDAC8-215ENST00000444609 TRGC1P0CF51 173 aa5.37□□□□□ -1.55
HDAC8-215ENST00000444609 S100A2P29034 98 aa5.37□□□□□ -1.55
HDAC8-215ENST00000444609 PLEKHB2Q96CS7 222 aa5.37□□□□□ -1.55
HDAC8-215ENST00000444609 FMC1Q96HJ9 113 aa5.37□□□□□ -1.55
HDAC8-215ENST00000444609 TRAV13-1A0A0B4J241 112 aa5.36□□□□□ -1.55
HDAC8-215ENST00000444609 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
HDAC8-215ENST00000444609 SCO2A0A1W2PP80 73 aa5.36□□□□□ -1.55
HDAC8-215ENST00000444609 COA6Q5JTJ3 125 aaKnown RBP5.36□□□□□ -1.55
HDAC8-215ENST00000444609 TCAPO15273 167 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 SLC25A20O43772 301 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 UBE2G1P62253 170 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
HDAC8-215ENST00000444609 COX19Q49B96 90 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 HIST3H2BBQ8N257 126 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 GATD1Q8NB37 220 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 OCC1Q8TAD7 63 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 LINC00167Q96N53 147 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 C2orf88Q9BSF0 95 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 OSTCQ9NRP0 149 aa5.35□□□□□ -1.55
HDAC8-215ENST00000444609 KIAA0087Q14695 138 aa5.34□□□□□ -1.55
HDAC8-215ENST00000444609 MRAP2Q96G30 205 aa5.34□□□□□ -1.55
HDAC8-215ENST00000444609 TRBV20OR9-2A0A075B6H5 130 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 SDHAF1A6NFY7 115 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 IFITM10A6NMD0 228 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 I3L3M4 83 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 G0S2P27469 103 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 GNG4P50150 75 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 Q6Q795 121 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 RPL39LQ96EH5 51 aaKnown RBP5.33□□□□□ -1.56
HDAC8-215ENST00000444609 SMIM12Q96EX1 92 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 XAGE1AQ9HD64 81 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 TRAPPC1Q9Y5R8 145 aa5.33□□□□□ -1.56
HDAC8-215ENST00000444609 IGHV3OR16-9A0A0B4J2B5 98 aa5.32□□□□□ -1.56
HDAC8-215ENST00000444609 K7EN84 100 aa5.32□□□□□ -1.56
HDAC8-215ENST00000444609 IGLC6P0CF74 106 aa5.32□□□□□ -1.56
HDAC8-215ENST00000444609 PMCHP20382 165 aa5.32□□□□□ -1.56
HDAC8-215ENST00000444609 FOXA3P55318 350 aaPredicted RBP5.32□□□□□ -1.56
HDAC8-215ENST00000444609 PRLHP81277 87 aa5.32□□□□□ -1.56
HDAC8-215ENST00000444609 RNASE13Q5GAN3 156 aaKnown RBP5.32□□□□□ -1.56
HDAC8-215ENST00000444609 LYZL1Q6UWQ5 148 aa5.32□□□□□ -1.56
HDAC8-215ENST00000444609 FAM231DQ6ZW35 169 aa5.32□□□□□ -1.56
HDAC8-215ENST00000444609 TPPP3Q9BW30 176 aa5.32□□□□□ -1.56
HDAC8-215ENST00000444609 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
HDAC8-215ENST00000444609 CENPWQ5EE01 88 aa5.31□□□□□ -1.56
HDAC8-215ENST00000444609 PYY3Q5JQD4 70 aa5.31□□□□□ -1.56
HDAC8-215ENST00000444609 C2orf82Q6UX34 121 aa5.31□□□□□ -1.56
HDAC8-215ENST00000444609 TMEM18Q96B42 140 aa5.31□□□□□ -1.56
HDAC8-215ENST00000444609 GNB1LQ9BYB4 327 aa5.31□□□□□ -1.56
HDAC8-215ENST00000444609 V9GYV3 84 aa5.31□□□□□ -1.56
HDAC8-215ENST00000444609 SMIM27A0A1W2PRY6 76 aa5.3□□□□□ -1.56
HDAC8-215ENST00000444609 GAGE10A6NGK3 116 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms