RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TINCRA0A1B0GVN0 87 aa6.72□□□□□ -1.33
SF3A1-203ENST00000444440 HBDP02042 147 aa6.72□□□□□ -1.33
SF3A1-203ENST00000444440 CKS1BP61024 79 aa6.72□□□□□ -1.33
SF3A1-203ENST00000444440 C9orf116Q5BN46 136 aaPredicted RBP6.72□□□□□ -1.33
SF3A1-203ENST00000444440 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
SF3A1-203ENST00000444440 UNQ6190/PRO20217Q6UXQ8 127 aa6.72□□□□□ -1.33
SF3A1-203ENST00000444440 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
SF3A1-203ENST00000444440 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
SF3A1-203ENST00000444440 LRP2P98164 4655 aa6.71□□□□□ -1.33
SF3A1-203ENST00000444440 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 FAM168BA1KXE4 195 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 ATP5LO75964 103 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 NDUFA6P56556 154 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 SRSF9Q13242 221 aaKnown RBP eCLIP6.71□□□□□ -1.34
SF3A1-203ENST00000444440 Q6ZRP5 223 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 PHF5AQ7RTV0 110 aaKnown RBP6.71□□□□□ -1.34
SF3A1-203ENST00000444440 KRTAP11-1Q8IUC1 163 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 Q8IZM0 81 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 LINC00469Q8N7U9 141 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 TOMM7Q9P0U1 55 aa6.71□□□□□ -1.34
SF3A1-203ENST00000444440 TLX1NBP0CAT3 122 aa6.7□□□□□ -1.34
SF3A1-203ENST00000444440 C2orf82Q6UX34 121 aa6.7□□□□□ -1.34
SF3A1-203ENST00000444440 CHCHD1Q96BP2 118 aaKnown RBP6.7□□□□□ -1.34
SF3A1-203ENST00000444440 H3BRM9 83 aa6.69□□□□□ -1.34
SF3A1-203ENST00000444440 PDZD11Q5EBL8 140 aa6.69□□□□□ -1.34
SF3A1-203ENST00000444440 BAGE3Q86Y29 109 aa6.69□□□□□ -1.34
SF3A1-203ENST00000444440 URB1-AS1Q96HZ7 61 aa6.69□□□□□ -1.34
SF3A1-203ENST00000444440 LINC01600Q96MT4 127 aa6.69□□□□□ -1.34
SF3A1-203ENST00000444440 PSORS1C2Q9UIG4 136 aa6.69□□□□□ -1.34
SF3A1-203ENST00000444440 PLA2G2DQ9UNK4 145 aa6.69□□□□□ -1.34
SF3A1-203ENST00000444440 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
SF3A1-203ENST00000444440 IGLV5-45A0A087WSX0 123 aa6.67□□□□□ -1.34
SF3A1-203ENST00000444440 A0A096LNJ9 63 aa6.67□□□□□ -1.34
SF3A1-203ENST00000444440 NDUFC2-KCTD14E9PQ53 114 aa6.67□□□□□ -1.34
SF3A1-203ENST00000444440 TRGC2P03986 189 aa6.67□□□□□ -1.34
SF3A1-203ENST00000444440 CXCL5P42830 114 aa6.67□□□□□ -1.34
SF3A1-203ENST00000444440 SPINK6Q6UWN8 80 aa6.67□□□□□ -1.34
SF3A1-203ENST00000444440 LPAP08519 4548 aa6.67□□□□□ -1.34
SF3A1-203ENST00000444440 SMIM1B2RUZ4 78 aa6.66□□□□□ -1.34
SF3A1-203ENST00000444440 F8VRH5 84 aa6.66□□□□□ -1.34
SF3A1-203ENST00000444440 HSBP1O75506 76 aa6.66□□□□□ -1.34
SF3A1-203ENST00000444440 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
SF3A1-203ENST00000444440 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
SF3A1-203ENST00000444440 GAGE2EQ4V326 116 aa6.66□□□□□ -1.34
SF3A1-203ENST00000444440 COX7B2Q8TF08 81 aa6.66□□□□□ -1.34
SF3A1-203ENST00000444440 GAGE2DQ9UEU5 116 aa6.66□□□□□ -1.34
SF3A1-203ENST00000444440 C9orf129Q5T035 196 aaKnown RBP6.65□□□□□ -1.34
SF3A1-203ENST00000444440 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
SF3A1-203ENST00000444440 COLCA2A8K830 154 aa6.64□□□□□ -1.35
SF3A1-203ENST00000444440 SPINK8P0C7L1 97 aa6.64□□□□□ -1.35
SF3A1-203ENST00000444440 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
SF3A1-203ENST00000444440 CHTOPQ9Y3Y2 248 aaKnown RBP6.64□□□□□ -1.35
SF3A1-203ENST00000444440 TRAV12-1A0A0B4J245 112 aa6.63□□□□□ -1.35
SF3A1-203ENST00000444440 C1orf137Q5JT78 98 aa6.63□□□□□ -1.35
SF3A1-203ENST00000444440 ZNF22P17026 224 aaPredicted RBP6.62□□□□□ -1.35
SF3A1-203ENST00000444440 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
SF3A1-203ENST00000444440 FAM19A2Q8N3H0 131 aa6.62□□□□□ -1.35
SF3A1-203ENST00000444440 M0QXV9 152 aa6.61□□□□□ -1.35
SF3A1-203ENST00000444440 SFTA2Q6UW10 78 aa6.61□□□□□ -1.35
SF3A1-203ENST00000444440 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
SF3A1-203ENST00000444440 IGLV5-39A0A0G2JS06 123 aa6.6□□□□□ -1.35
SF3A1-203ENST00000444440 C11orf86A6NJI1 115 aa6.6□□□□□ -1.35
SF3A1-203ENST00000444440 SERF1AO75920 110 aa6.6□□□□□ -1.35
SF3A1-203ENST00000444440 LEPROTL1O95214 131 aa6.6□□□□□ -1.35
SF3A1-203ENST00000444440 IGLV7-43P04211 117 aa6.6□□□□□ -1.35
SF3A1-203ENST00000444440 LBHQ53QV2 105 aaPredicted RBP6.59□□□□□ -1.35
SF3A1-203ENST00000444440 XAGE1AQ9HD64 81 aa6.59□□□□□ -1.35
SF3A1-203ENST00000444440 HSPB8Q9UJY1 196 aa6.59□□□□□ -1.35
SF3A1-203ENST00000444440 UBE2BP63146 152 aa6.58□□□□□ -1.36
SF3A1-203ENST00000444440 RNF213Q63HN8 5207 aa6.58□□□□□ -1.36
SF3A1-203ENST00000444440 SCO1O75880 301 aa6.57□□□□□ -1.36
SF3A1-203ENST00000444440 KRTAP1-4P0C5Y4 121 aa6.57□□□□□ -1.36
SF3A1-203ENST00000444440 COX17Q14061 63 aa6.57□□□□□ -1.36
SF3A1-203ENST00000444440 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
SF3A1-203ENST00000444440 H0Y8G0 127 aa6.56□□□□□ -1.36
SF3A1-203ENST00000444440 H0Y9J4 135 aa6.56□□□□□ -1.36
SF3A1-203ENST00000444440 FABP4P15090 132 aa6.56□□□□□ -1.36
SF3A1-203ENST00000444440 PRR26Q8N8Z3 221 aa6.56□□□□□ -1.36
SF3A1-203ENST00000444440 C22orf24Q9Y442 160 aa6.56□□□□□ -1.36
SF3A1-203ENST00000444440 NUPR1O60356 82 aa6.55□□□□□ -1.36
SF3A1-203ENST00000444440 PLNP26678 52 aa6.55□□□□□ -1.36
SF3A1-203ENST00000444440 PFN2P35080 140 aa6.55□□□□□ -1.36
SF3A1-203ENST00000444440 LINC00310P59036 64 aa6.55□□□□□ -1.36
SF3A1-203ENST00000444440 TP73-AS1Q9UF72 201 aa6.55□□□□□ -1.36
SF3A1-203ENST00000444440 ERG28Q9UKR5 140 aa6.55□□□□□ -1.36
SF3A1-203ENST00000444440 DIRC1Q969H9 104 aa6.54□□□□□ -1.36
SF3A1-203ENST00000444440 MAP1LC3CQ9BXW4 147 aa6.54□□□□□ -1.36
SF3A1-203ENST00000444440 LINC00587B1AMM8 73 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BKO60814 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 ATP6V1G1O75348 118 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BJP06899 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BOP23527 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BBP33778 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BDP58876 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST1H2BCP62807 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST2H2BEQ16778 126 aa6.53□□□□□ -1.36
SF3A1-203ENST00000444440 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.53□□□□□ -1.36
SF3A1-203ENST00000444440 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms