RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TRBV30A0A0K0K1B3 111 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 ZNF22P17026 224 aaPredicted RBP5.7□□□□□ -1.5
CCDC39-201ENST00000442201 C2orf66Q6UXQ4 117 aa5.7□□□□□ -1.5
CCDC39-201ENST00000442201 TSHBP01222 138 aa5.69□□□□□ -1.5
CCDC39-201ENST00000442201 TOMM6Q96B49 74 aa5.69□□□□□ -1.5
CCDC39-201ENST00000442201 CELA1Q9UNI1 258 aa5.69□□□□□ -1.5
CCDC39-201ENST00000442201 NACAE9PAV3 2078 aa5.69□□□□□ -1.5
CCDC39-201ENST00000442201 H7C423 109 aa5.69□□□□□ -1.5
CCDC39-201ENST00000442201 SERP2Q8N6R1 65 aa5.69□□□□□ -1.5
CCDC39-201ENST00000442201 SCGB3A1Q96QR1 104 aa5.68□□□□□ -1.5
CCDC39-201ENST00000442201 PRO0255Q9UI72 69 aa5.68□□□□□ -1.5
CCDC39-201ENST00000442201 IGHV3-38A0A0C4DH36 116 aa5.68□□□□□ -1.5
CCDC39-201ENST00000442201 ZNF815PA8K554 130 aa5.68□□□□□ -1.5
CCDC39-201ENST00000442201 C2orf82Q6UX34 121 aa5.68□□□□□ -1.5
CCDC39-201ENST00000442201 DAZ4Q86SG3 579 aaKnown RBP5.68□□□□□ -1.5
CCDC39-201ENST00000442201 C20orf203Q8NBC4 194 aa5.68□□□□□ -1.5
CCDC39-201ENST00000442201 C11orf68Q9H3H3 251 aaKnown RBP5.68□□□□□ -1.5
CCDC39-201ENST00000442201 DAZ3Q9NR90 486 aaKnown RBP5.68□□□□□ -1.5
CCDC39-201ENST00000442201 A0A0U1RRA0 63 aa5.67□□□□□ -1.5
CCDC39-201ENST00000442201 RPL18AQ02543 176 aaKnown RBP5.67□□□□□ -1.5
CCDC39-201ENST00000442201 LOC100131303A0A0U1RQF7 123 aa5.67□□□□□ -1.5
CCDC39-201ENST00000442201 KRTAP21-3Q3LHN1 58 aa5.67□□□□□ -1.5
CCDC39-201ENST00000442201 RPL39P62891 51 aaKnown RBP5.66□□□□□ -1.5
CCDC39-201ENST00000442201 TM2D3Q9BRN9 247 aa5.66□□□□□ -1.5
CCDC39-201ENST00000442201 SERP1Q9Y6X1 66 aa5.66□□□□□ -1.5
CCDC39-201ENST00000442201 PAX4O43316 350 aa5.66□□□□□ -1.5
CCDC39-201ENST00000442201 NDUFC2O95298 119 aa5.66□□□□□ -1.5
CCDC39-201ENST00000442201 CMYA5Q8N3K9 4069 aa5.66□□□□□ -1.5
CCDC39-201ENST00000442201 GYPEP15421 78 aa5.66□□□□□ -1.5
CCDC39-201ENST00000442201 HTN3P15516 51 aa5.66□□□□□ -1.5
CCDC39-201ENST00000442201 HERVK_113P61574 105 aa5.66□□□□□ -1.5
CCDC39-201ENST00000442201 IGIPA6NJ69 53 aa5.65□□□□□ -1.5
CCDC39-201ENST00000442201 SCGB1D4Q6XE38 83 aa5.65□□□□□ -1.5
CCDC39-201ENST00000442201 LINC01561Q8N1V8 128 aa5.65□□□□□ -1.5
CCDC39-201ENST00000442201 TMEM141Q96I45 108 aa5.65□□□□□ -1.5
CCDC39-201ENST00000442201 TIMM17AQ99595 171 aa5.65□□□□□ -1.5
CCDC39-201ENST00000442201 A0A0J9YWU9 116 aa5.65□□□□□ -1.51
CCDC39-201ENST00000442201 CHCHD7Q9BUK0 85 aa5.65□□□□□ -1.51
CCDC39-201ENST00000442201 TMEM223A0PJW6 202 aa5.65□□□□□ -1.51
CCDC39-201ENST00000442201 ZNF561-AS1K7EIQ3 104 aa5.65□□□□□ -1.51
CCDC39-201ENST00000442201 AMELXQ99217 191 aa5.65□□□□□ -1.51
CCDC39-201ENST00000442201 NPC2P61916 151 aa5.64□□□□□ -1.51
CCDC39-201ENST00000442201 NTM-AS1Q6ZSK4 140 aa5.64□□□□□ -1.51
CCDC39-201ENST00000442201 VSIG2Q96IQ7 327 aa5.64□□□□□ -1.51
CCDC39-201ENST00000442201 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-201ENST00000442201 IGKV2-29A2NJV5 120 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-201ENST00000442201 TRIAP1O43715 76 aa5.63□□□□□ -1.51
CCDC39-201ENST00000442201 LST1O00453 97 aa5.63□□□□□ -1.51
CCDC39-201ENST00000442201 PAPPA-AS1Q5QFB9 102 aa5.63□□□□□ -1.51
CCDC39-201ENST00000442201 C11orf45Q8TAV5 145 aa5.63□□□□□ -1.51
CCDC39-201ENST00000442201 DNAH3Q8TD57 4116 aa5.63□□□□□ -1.51
CCDC39-201ENST00000442201 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-201ENST00000442201 TIRAPP58753 221 aa5.63□□□□□ -1.51
CCDC39-201ENST00000442201 Q6ZTC4 211 aa5.63□□□□□ -1.51
CCDC39-201ENST00000442201 FP248Q71RG6 208 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-201ENST00000442201 TMEM243Q9BU79 118 aa5.63□□□□□ -1.51
CCDC39-201ENST00000442201 DGAT2L7PQ6IED9 249 aa5.62□□□□□ -1.51
CCDC39-201ENST00000442201 UBE2D4Q9Y2X8 147 aa5.62□□□□□ -1.51
CCDC39-201ENST00000442201 IGLV4-3A0A075B6K6 122 aa5.62□□□□□ -1.51
CCDC39-201ENST00000442201 SMIM26A0A096LP01 95 aa5.62□□□□□ -1.51
CCDC39-201ENST00000442201 TRBV6-8A0A0A6YYG3 113 aa5.62□□□□□ -1.51
CCDC39-201ENST00000442201 DAND5Q8N907 189 aa5.62□□□□□ -1.51
CCDC39-201ENST00000442201 OPRPNQ99935 248 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-201ENST00000442201 UBE2L6O14933 153 aa5.61□□□□□ -1.51
CCDC39-201ENST00000442201 NANOS2P60321 138 aaKnown RBP5.61□□□□□ -1.51
CCDC39-201ENST00000442201 B9D2Q9BPU9 175 aa5.61□□□□□ -1.51
CCDC39-201ENST00000442201 TIMM21Q9BVV7 248 aa5.61□□□□□ -1.51
CCDC39-201ENST00000442201 A0A096LPF7 62 aa5.61□□□□□ -1.51
CCDC39-201ENST00000442201 ICOSQ9Y6W8 199 aa5.61□□□□□ -1.51
CCDC39-201ENST00000442201 TENM3Q9P273 2699 aa5.61□□□□□ -1.51
CCDC39-201ENST00000442201 MRPS36P82909 103 aaKnown RBP5.6□□□□□ -1.51
CCDC39-201ENST00000442201 H3BNG1 76 aa5.6□□□□□ -1.51
CCDC39-201ENST00000442201 DEFB131BA0A096LNP1 70 aa5.59□□□□□ -1.51
CCDC39-201ENST00000442201 TSPEAR-AS2P59090 65 aa5.59□□□□□ -1.52
CCDC39-201ENST00000442201 FAM104AQ969W3 186 aa5.59□□□□□ -1.52
CCDC39-201ENST00000442201 IGLV4-69A0A075B6H9 119 aa5.58□□□□□ -1.52
CCDC39-201ENST00000442201 CD164Q04900 197 aa5.58□□□□□ -1.52
CCDC39-201ENST00000442201 RNASE13Q5GAN3 156 aaKnown RBP5.58□□□□□ -1.52
CCDC39-201ENST00000442201 TRAV10A0A0B4J240 114 aa5.58□□□□□ -1.52
CCDC39-201ENST00000442201 C11orf86A6NJI1 115 aa5.58□□□□□ -1.52
CCDC39-201ENST00000442201 Q6JHZ5 121 aa5.58□□□□□ -1.52
CCDC39-201ENST00000442201 PMAIP1Q13794 54 aa5.57□□□□□ -1.52
CCDC39-201ENST00000442201 CDC42SE2Q9NRR3 84 aa5.57□□□□□ -1.52
CCDC39-201ENST00000442201 DNHD1Q96M86 4753 aa5.57□□□□□ -1.52
CCDC39-201ENST00000442201 Q6ZRU5 148 aa5.57□□□□□ -1.52
CCDC39-201ENST00000442201 A0A0J9YXV3 536 aa5.56□□□□□ -1.52
CCDC39-201ENST00000442201 COX6CP09669 75 aa5.56□□□□□ -1.52
CCDC39-201ENST00000442201 MUSTN1Q8IVN3 82 aa5.56□□□□□ -1.52
CCDC39-201ENST00000442201 USP17L23D6RBM5 183 aa5.56□□□□□ -1.52
CCDC39-201ENST00000442201 LELP1Q5T871 98 aa5.56□□□□□ -1.52
CCDC39-201ENST00000442201 Q1RN00 199 aa5.56□□□□□ -1.52
CCDC39-201ENST00000442201 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
CCDC39-201ENST00000442201 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
CCDC39-201ENST00000442201 H7BZZ5 65 aa5.55□□□□□ -1.52
CCDC39-201ENST00000442201 LYPD5Q6UWN5 251 aa5.55□□□□□ -1.52
CCDC39-201ENST00000442201 C22orf24Q9Y442 160 aa5.55□□□□□ -1.52
CCDC39-201ENST00000442201 IGLV4-60A0A075B6I1 120 aa5.55□□□□□ -1.52
CCDC39-201ENST00000442201 A0A1B0GUV1 79 aa5.55□□□□□ -1.52
CCDC39-201ENST00000442201 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
CCDC39-201ENST00000442201 COPS9Q8WXC6 57 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms