RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 IGHV3-21A0A0B4J1V1 117 aa3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 INAFM1C9JVW0 142 aa3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 MSMBP08118 114 aa3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 C1orf134Q5TEV5 83 aa3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 CAMK2N2Q96S95 79 aa3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 RPP21Q9H633 154 aaKnown RBP3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 C8orf17Q9NRJ1 99 aa3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 LINC00846Q9NV44 126 aa3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 CRYBG3Q68DQ2 2970 aa3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 URB1O60287 2271 aaKnown RBP3.17□□□□□ -1.9
HMGB3P9-201ENST00000441799 FER1L5A0AVI2 2057 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 DSCAMO60469 2012 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGKV3D-15A0A087WSY6 115 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 TRAV40A0A0B4J280 105 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 A0A0J9YX75 114 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 A0A1B0GUV1 79 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 D6R8Y8 96 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 LY6HO94772 140 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 LHBP01229 141 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 IGLV2-23P01705 113 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 BAALC-AS2P0C853 105 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 SAA2P0DJI9 122 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 ARL14EPLP0DKL9 152 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 CMC4P56277 68 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 Q1RN00 199 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 MUSTN1Q8IVN3 82 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 C1orf64Q8NEQ6 169 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 NPBQ8NG41 125 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 NOTCH3Q9UM47 2321 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 MTORP42345 2549 aa3.16□□□□□ -1.9
HMGB3P9-201ENST00000441799 TLN1Q9Y490 2541 aaKnown RBP3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 IGLV5-37A0A075B6J1 123 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 A6NED7 52 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 IGIPA6NJ69 53 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 CRPP02741 224 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 ZNF833PQ6ZTB9 187 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 ADM2Q7Z4H4 148 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 OCR1Q9BZK8 76 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 SDK1Q7Z5N4 2213 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 ASCC3Q8N3C0 2202 aaKnown RBP3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 CABIN1Q9Y6J0 2220 aa3.15□□□□□ -1.91
HMGB3P9-201ENST00000441799 CSMD2Q7Z408 3487 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 MYO7BQ6PIF6 2116 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 ABCA7Q8IZY2 2146 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 NAV3Q8IVL0 2385 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 IGHV7-4-1A0A0J9YVY3 117 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 A0A1B0GUT8 65 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 K7ERS5 55 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 PRB4P10163 310 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 RNASE13Q5GAN3 156 aaKnown RBP3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 SPINK14Q6IE38 97 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 TTTY12Q9BZ98 90 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 C22orf24Q9Y442 160 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 U3KQA8 63 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 CEP192Q8TEP8 1941 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 NBEAL1Q6ZS30 2694 aa3.14□□□□□ -1.91
HMGB3P9-201ENST00000441799 HIVEP1P15822 2718 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 ABCA2Q9BZC7 2435 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 COL6A6A6NMZ7 2263 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 DOPEY2Q9Y3R5 2298 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 IGLV1-50A0A075B6I6 118 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 IGHV4-4A0A075B6R2 117 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 RPL37AP8A6NKH3 93 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 PMS2P5A8MQ11 134 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 RTL8CO15255 209 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 TFF3Q07654 80 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 MUC7Q8TAX7 377 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 C7orf33Q8WU49 177 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 Q9BRP9 147 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 NDUFA4L2Q9NRX3 87 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 TIMM8BQ9Y5J9 83 aaPredicted RBP3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 CNTRLQ7Z7A1 2325 aa3.13□□□□□ -1.91
HMGB3P9-201ENST00000441799 MED13Q9UHV7 2174 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 TNRC6BQ9UPQ9 1833 aaKnown RBP3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 IGHV4-30-2A0A087WSY4 118 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 A0A087WSZ3 146 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 LCE6AA0A183 80 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 A8MWP4 228 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 I3L3M4 83 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 LECT2O14960 151 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 PLXNB1O43157 2135 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 PPP1R17O96001 155 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 NREPQ16612 68 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 SPINK9Q5DT21 86 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 CHCHD7Q9BUK0 85 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 HEATR1Q9H583 2144 aaKnown RBP3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 TMEM14CQ9P0S9 112 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 MED12Q93074 2177 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 SHANK1Q9Y566 2161 aa3.12□□□□□ -1.91
HMGB3P9-201ENST00000441799 IGHV3-73A0A0B4J1V6 119 aa3.11□□□□□ -1.91
HMGB3P9-201ENST00000441799 TRAV12-3A0A0B4J271 114 aa3.11□□□□□ -1.91
HMGB3P9-201ENST00000441799 IGHV3-64DA0A0J9YX35 117 aa3.11□□□□□ -1.91
HMGB3P9-201ENST00000441799 A0A0J9YXY3 114 aa3.11□□□□□ -1.91
HMGB3P9-201ENST00000441799 TRBV6-1A0A0K0K1D8 114 aa3.11□□□□□ -1.91
HMGB3P9-201ENST00000441799 C17orf98A8MV24 154 aa3.11□□□□□ -1.91
HMGB3P9-201ENST00000441799 DEFB108AA8MXU0 73 aa3.11□□□□□ -1.91
HMGB3P9-201ENST00000441799 CD24P25063 80 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms