RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 A8MWP4 228 aa7.17□□□□□ -1.26
SYNE2-206ENST00000441438 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
SYNE2-206ENST00000441438 H7C423 109 aa7.17□□□□□ -1.26
SYNE2-206ENST00000441438 DPM3Q9P2X0 92 aa7.17□□□□□ -1.26
SYNE2-206ENST00000441438 TIMM8BQ9Y5J9 83 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-206ENST00000441438 UNC79Q9P2D8 2635 aa7.17□□□□□ -1.26
SYNE2-206ENST00000441438 SETD2Q9BYW2 2564 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-206ENST00000441438 Q8NDZ9 215 aa7.16□□□□□ -1.26
SYNE2-206ENST00000441438 MAST4O15021 2626 aa7.16□□□□□ -1.26
SYNE2-206ENST00000441438 NOTCH3Q9UM47 2321 aa7.16□□□□□ -1.26
SYNE2-206ENST00000441438 IGHV1-69P01742 117 aa7.16□□□□□ -1.26
SYNE2-206ENST00000441438 CRPP02741 224 aa7.16□□□□□ -1.26
SYNE2-206ENST00000441438 RNASE1P07998 156 aaKnown RBP7.16□□□□□ -1.26
SYNE2-206ENST00000441438 CRIP1P50238 77 aa7.16□□□□□ -1.26
SYNE2-206ENST00000441438 RNASE13Q5GAN3 156 aaKnown RBP7.16□□□□□ -1.26
SYNE2-206ENST00000441438 Q6ZTC4 211 aa7.16□□□□□ -1.26
SYNE2-206ENST00000441438 TRBV10-3A0A0K0K1G6 114 aa7.15□□□□□ -1.26
SYNE2-206ENST00000441438 ZANQ9Y493 2812 aa7.15□□□□□ -1.27
SYNE2-206ENST00000441438 ZNF575Q86XF7 245 aa7.15□□□□□ -1.27
SYNE2-206ENST00000441438 ZNF815PA8K554 130 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 TRGV3P03979 118 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 BAALC-AS2P0C853 105 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 LYZL1Q6UWQ5 148 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 NPBQ8NG41 125 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 CNFNQ9BYD5 112 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 IGHV3OR16-8A0A075B7F1 116 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 MRGPRG-AS1Q2M3A8 158 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 CAMK2N2Q96S95 79 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 SNURFQ9Y675 71 aa7.14□□□□□ -1.27
SYNE2-206ENST00000441438 KRTAP21-3Q3LHN1 58 aa7.13□□□□□ -1.27
SYNE2-206ENST00000441438 NAV2Q8IVL1 2488 aa7.13□□□□□ -1.27
SYNE2-206ENST00000441438 SOCS3O14543 225 aa7.13□□□□□ -1.27
SYNE2-206ENST00000441438 PDE6HQ13956 83 aa7.13□□□□□ -1.27
SYNE2-206ENST00000441438 MIAQ16674 131 aa7.13□□□□□ -1.27
SYNE2-206ENST00000441438 SORL1Q92673 2214 aa7.13□□□□□ -1.27
SYNE2-206ENST00000441438 C1orf64Q8NEQ6 169 aa7.12□□□□□ -1.27
SYNE2-206ENST00000441438 IGHV4OR15-8A0A075B7B6 117 aa7.12□□□□□ -1.27
SYNE2-206ENST00000441438 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
SYNE2-206ENST00000441438 IGHV4-30-2A0A087WSY4 118 aa7.11□□□□□ -1.27
SYNE2-206ENST00000441438 H3BRN7 92 aa7.11□□□□□ -1.27
SYNE2-206ENST00000441438 LINC01547P58512 204 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-206ENST00000441438 LYZP61626 148 aa7.11□□□□□ -1.27
SYNE2-206ENST00000441438 ABCA12Q86UK0 2595 aa7.11□□□□□ -1.27
SYNE2-206ENST00000441438 SH2D1AO60880 128 aa7.1□□□□□ -1.27
SYNE2-206ENST00000441438 IGHV3-23P01764 117 aa7.1□□□□□ -1.27
SYNE2-206ENST00000441438 PLNP26678 52 aa7.1□□□□□ -1.27
SYNE2-206ENST00000441438 IGLV2-18A0A075B6J9 118 aa7.1□□□□□ -1.27
SYNE2-206ENST00000441438 LECT2O14960 151 aa7.1□□□□□ -1.27
SYNE2-206ENST00000441438 IGHV1-8P0DP01 117 aa7.1□□□□□ -1.27
SYNE2-206ENST00000441438 NBPF19A0A087WUL8 3843 aa7.1□□□□□ -1.27
SYNE2-206ENST00000441438 MYO9AB2RTY4 2548 aa7.1□□□□□ -1.27
SYNE2-206ENST00000441438 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
SYNE2-206ENST00000441438 TRAV12-1A0A0B4J245 112 aa7.09□□□□□ -1.27
SYNE2-206ENST00000441438 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.27
SYNE2-206ENST00000441438 IGKV3D-7A0A0C4DH55 119 aa7.09□□□□□ -1.28
SYNE2-206ENST00000441438 A0A087WW49 117 aa7.08□□□□□ -1.28
SYNE2-206ENST00000441438 I3L2K1 104 aa7.08□□□□□ -1.28
SYNE2-206ENST00000441438 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
SYNE2-206ENST00000441438 SONP18583 2426 aaKnown RBP7.07□□□□□ -1.28
SYNE2-206ENST00000441438 IGLV8-61A0A075B6I0 122 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 IGHV7-4-1A0A0J9YVY3 117 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 TRBV30A0A0K0K1B3 111 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 IGKV1-17P01599 117 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 KRTAP10-9P60411 292 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 TRAV40A0A0B4J280 105 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 CFC1BP0CG36 223 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 CFC1P0CG37 223 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 CASC2Q6XLA1 102 aa7.07□□□□□ -1.28
SYNE2-206ENST00000441438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-206ENST00000441438 IGHV3-49A0A0A0MS15 119 aa7.06□□□□□ -1.28
SYNE2-206ENST00000441438 K7ERS5 55 aa7.06□□□□□ -1.28
SYNE2-206ENST00000441438 ERC2-IT1O76042 136 aa7.06□□□□□ -1.28
SYNE2-206ENST00000441438 IGFL4Q6B9Z1 124 aa7.06□□□□□ -1.28
SYNE2-206ENST00000441438 IGHV1-3A0A0C4DH29 117 aa7.06□□□□□ -1.28
SYNE2-206ENST00000441438 M0R3E3 92 aa7.06□□□□□ -1.28
SYNE2-206ENST00000441438 CDC42SE2Q9NRR3 84 aa7.06□□□□□ -1.28
SYNE2-206ENST00000441438 TRAV23DV6A0A075B6W5 121 aa7.05□□□□□ -1.28
SYNE2-206ENST00000441438 IGLV1-40P01703 118 aa7.05□□□□□ -1.28
SYNE2-206ENST00000441438 F8VRH5 84 aa7.05□□□□□ -1.28
SYNE2-206ENST00000441438 IGHV3-33P01772 117 aa7.05□□□□□ -1.28
SYNE2-206ENST00000441438 CCDC168Q8NDH2 2452 aa7.05□□□□□ -1.28
SYNE2-206ENST00000441438 PDZD2O15018 2839 aa7.05□□□□□ -1.28
SYNE2-206ENST00000441438 PSCAO43653 123 aa7.04□□□□□ -1.28
SYNE2-206ENST00000441438 KLK15Q9H2R5 256 aa7.04□□□□□ -1.28
SYNE2-206ENST00000441438 TEX15Q9BXT5 2789 aa7.04□□□□□ -1.28
SYNE2-206ENST00000441438 ITPR2Q14571 2701 aa7.04□□□□□ -1.28
SYNE2-206ENST00000441438 Q6ZQT0 140 aa7.04□□□□□ -1.28
SYNE2-206ENST00000441438 RNF5Q99942 180 aa7.04□□□□□ -1.28
SYNE2-206ENST00000441438 APCP25054 2843 aa7.03□□□□□ -1.28
SYNE2-206ENST00000441438 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
SYNE2-206ENST00000441438 FSHBP01225 129 aa7.03□□□□□ -1.28
SYNE2-206ENST00000441438 DEFB113Q30KQ7 82 aa7.03□□□□□ -1.28
SYNE2-206ENST00000441438 K7EIM0 57 aa7.03□□□□□ -1.28
SYNE2-206ENST00000441438 IGHV3-66A0A0C4DH42 116 aa7.02□□□□□ -1.29
SYNE2-206ENST00000441438 LINC00467Q9BRT7 94 aa7.02□□□□□ -1.29
SYNE2-206ENST00000441438 IGLV1-47P01700 117 aa7.02□□□□□ -1.29
SYNE2-206ENST00000441438 GAS8-AS1O95177 125 aa7.02□□□□□ -1.29
SYNE2-206ENST00000441438 SLURP1P55000 103 aa7.02□□□□□ -1.29
SYNE2-206ENST00000441438 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
SYNE2-206ENST00000441438 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms