RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 ALKBH7Q9BT30 221 aaPredicted RBP8.25□□□□□ -1.09
PTPRN-205ENST00000440552 VCX2Q9H322 139 aa8.25□□□□□ -1.09
PTPRN-205ENST00000440552 F8VRH5 84 aa8.24□□□□□ -1.09
PTPRN-205ENST00000440552 C2orf66Q6UXQ4 117 aa8.24□□□□□ -1.09
PTPRN-205ENST00000440552 KRTAP13-1Q8IUC0 172 aa8.24□□□□□ -1.09
PTPRN-205ENST00000440552 CDIP1Q9H305 208 aa8.24□□□□□ -1.09
PTPRN-205ENST00000440552 CYSLTR1Q9Y271 337 aa8.24□□□□□ -1.09
PTPRN-205ENST00000440552 LAMTOR2Q9Y2Q5 125 aa8.24□□□□□ -1.09
PTPRN-205ENST00000440552 ZC2HC1BQ5TFG8 222 aa8.23□□□□□ -1.09
PTPRN-205ENST00000440552 ATP5L2Q7Z4Y8 100 aa8.23□□□□□ -1.09
PTPRN-205ENST00000440552 LINC00304Q8N9R0 145 aa8.23□□□□□ -1.09
PTPRN-205ENST00000440552 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
PTPRN-205ENST00000440552 C9JQL5 133 aa8.22□□□□□ -1.09
PTPRN-205ENST00000440552 CXCL5P42830 114 aa8.22□□□□□ -1.09
PTPRN-205ENST00000440552 SEC11AP67812 179 aa8.22□□□□□ -1.09
PTPRN-205ENST00000440552 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
PTPRN-205ENST00000440552 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
PTPRN-205ENST00000440552 IGLV7-46A0A075B6I9 117 aa8.21□□□□□ -1.1
PTPRN-205ENST00000440552 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
PTPRN-205ENST00000440552 HERVK_113P63121 156 aa8.21□□□□□ -1.1
PTPRN-205ENST00000440552 AKAP14Q86UN6 197 aa8.21□□□□□ -1.1
PTPRN-205ENST00000440552 Q8N8P6 123 aa8.21□□□□□ -1.1
PTPRN-205ENST00000440552 MAP1LC3AQ9H492 121 aa8.21□□□□□ -1.1
PTPRN-205ENST00000440552 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
PTPRN-205ENST00000440552 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
PTPRN-205ENST00000440552 K7EMI3 77 aa8.2□□□□□ -1.1
PTPRN-205ENST00000440552 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
PTPRN-205ENST00000440552 LOC389332A0A1B0GUA5 103 aa8.19□□□□□ -1.1
PTPRN-205ENST00000440552 ORMDL2Q53FV1 153 aa8.19□□□□□ -1.1
PTPRN-205ENST00000440552 PAPPA-AS1Q5QFB9 102 aa8.19□□□□□ -1.1
PTPRN-205ENST00000440552 UBE2AP49459 152 aa8.18□□□□□ -1.1
PTPRN-205ENST00000440552 PEA15Q15121 130 aa8.18□□□□□ -1.1
PTPRN-205ENST00000440552 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
PTPRN-205ENST00000440552 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
PTPRN-205ENST00000440552 GAGE10A6NGK3 116 aa8.16□□□□□ -1.1
PTPRN-205ENST00000440552 G0S2P27469 103 aa8.15□□□□□ -1.1
PTPRN-205ENST00000440552 SRSF3P84103 164 aaKnown RBP8.15□□□□□ -1.1
PTPRN-205ENST00000440552 PNRC1Q12796 327 aaPredicted RBP8.15□□□□□ -1.1
PTPRN-205ENST00000440552 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.1
PTPRN-205ENST00000440552 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
PTPRN-205ENST00000440552 TIMM17AQ99595 171 aa8.15□□□□□ -1.1
PTPRN-205ENST00000440552 SMIM1B2RUZ4 78 aa8.14□□□□□ -1.11
PTPRN-205ENST00000440552 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
PTPRN-205ENST00000440552 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
PTPRN-205ENST00000440552 NXT2Q9NPJ8 142 aaKnown RBP8.13□□□□□ -1.11
PTPRN-205ENST00000440552 IGLV5-45A0A087WSX0 123 aa8.12□□□□□ -1.11
PTPRN-205ENST00000440552 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
PTPRN-205ENST00000440552 TOMM6Q96B49 74 aa8.11□□□□□ -1.11
PTPRN-205ENST00000440552 IGKV2-28A0A075B6P5 120 aa8.1□□□□□ -1.11
PTPRN-205ENST00000440552 IGKV2D-28P01615 120 aa8.1□□□□□ -1.11
PTPRN-205ENST00000440552 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
PTPRN-205ENST00000440552 SPAG11AQ6PDA7 123 aa8.1□□□□□ -1.11
PTPRN-205ENST00000440552 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
PTPRN-205ENST00000440552 ERASQ7Z444 233 aa8.1□□□□□ -1.11
PTPRN-205ENST00000440552 RAB5BP61020 215 aa8.09□□□□□ -1.11
PTPRN-205ENST00000440552 PRLHP81277 87 aa8.09□□□□□ -1.11
PTPRN-205ENST00000440552 PLEKHB2Q96CS7 222 aa8.08□□□□□ -1.12
PTPRN-205ENST00000440552 GNB1LQ9BYB4 327 aa8.08□□□□□ -1.12
PTPRN-205ENST00000440552 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
PTPRN-205ENST00000440552 SCO1O75880 301 aa8.07□□□□□ -1.12
PTPRN-205ENST00000440552 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
PTPRN-205ENST00000440552 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
PTPRN-205ENST00000440552 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
PTPRN-205ENST00000440552 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
PTPRN-205ENST00000440552 SCGB3A1Q96QR1 104 aa8.07□□□□□ -1.12
PTPRN-205ENST00000440552 hCG_2014768A0A024R1R8 64 aa8.06□□□□□ -1.12
PTPRN-205ENST00000440552 LINC01549A6NIU2 74 aa8.06□□□□□ -1.12
PTPRN-205ENST00000440552 ATP5LO75964 103 aa8.06□□□□□ -1.12
PTPRN-205ENST00000440552 VPREB1P12018 145 aa8.06□□□□□ -1.12
PTPRN-205ENST00000440552 ANAPC16Q96DE5 110 aa8.06□□□□□ -1.12
PTPRN-205ENST00000440552 MRPL18Q9H0U6 180 aaKnown RBP8.06□□□□□ -1.12
PTPRN-205ENST00000440552 TMEM238C9JI98 176 aa8.05□□□□□ -1.12
PTPRN-205ENST00000440552 M0R378 163 aa8.05□□□□□ -1.12
PTPRN-205ENST00000440552 MT-ND4LP03901 98 aa8.05□□□□□ -1.12
PTPRN-205ENST00000440552 SPINK8P0C7L1 97 aa8.05□□□□□ -1.12
PTPRN-205ENST00000440552 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
PTPRN-205ENST00000440552 LINC00337Q8N6G1 96 aa8.05□□□□□ -1.12
PTPRN-205ENST00000440552 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
PTPRN-205ENST00000440552 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
PTPRN-205ENST00000440552 RPL24P83731 157 aaKnown RBP8.04□□□□□ -1.12
PTPRN-205ENST00000440552 CBLN2Q8IUK8 224 aa8.04□□□□□ -1.12
PTPRN-205ENST00000440552 H3BRM9 83 aa8.03□□□□□ -1.12
PTPRN-205ENST00000440552 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
PTPRN-205ENST00000440552 FSIP2Q5CZC0 6907 aa8.03□□□□□ -1.12
PTPRN-205ENST00000440552 PFN2P35080 140 aa8.02□□□□□ -1.13
PTPRN-205ENST00000440552 C4orf48Q5BLP8 95 aa8.02□□□□□ -1.13
PTPRN-205ENST00000440552 SPRR4Q96PI1 79 aa8.02□□□□□ -1.13
PTPRN-205ENST00000440552 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
PTPRN-205ENST00000440552 LINC01546A6NGU7 62 aa8.01□□□□□ -1.13
PTPRN-205ENST00000440552 COX17Q14061 63 aa8.01□□□□□ -1.13
PTPRN-205ENST00000440552 PMVKQ15126 192 aa8.01□□□□□ -1.13
PTPRN-205ENST00000440552 CRCT1Q9UGL9 99 aa8.01□□□□□ -1.13
PTPRN-205ENST00000440552 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
PTPRN-205ENST00000440552 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
PTPRN-205ENST00000440552 HIGD2AQ9BW72 106 aa8□□□□□ -1.13
PTPRN-205ENST00000440552 KRTAP4-1Q9BYQ7 146 aa7.99□□□□□ -1.13
PTPRN-205ENST00000440552 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
PTPRN-205ENST00000440552 IGLC3P0DOY3 106 aa7.98□□□□□ -1.13
PTPRN-205ENST00000440552 KIAA1644Q3SXP7 199 aa7.98□□□□□ -1.13
PTPRN-205ENST00000440552 Q8NDZ9 215 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms