RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.66□□□□□ -0.54
CCDC144A-209ENST00000436374 MYMXA0A1B0GTQ4 84 aa11.66□□□□□ -0.54
CCDC144A-209ENST00000436374 MAPKAPK5-AS1Q8N8E1 139 aa11.66□□□□□ -0.54
CCDC144A-209ENST00000436374 NDUFA1O15239 70 aa11.65□□□□□ -0.54
CCDC144A-209ENST00000436374 SPATA45Q537H7 98 aa11.65□□□□□ -0.54
CCDC144A-209ENST00000436374 LRCOL1A6NCL2 159 aa11.64□□□□□ -0.55
CCDC144A-209ENST00000436374 NTN5Q8WTR8 489 aaPredicted RBP11.64□□□□□ -0.55
CCDC144A-209ENST00000436374 CAMK2N2Q96S95 79 aa11.64□□□□□ -0.55
CCDC144A-209ENST00000436374 NDUFA12Q9UI09 145 aa11.64□□□□□ -0.55
CCDC144A-209ENST00000436374 PAM16Q9Y3D7 125 aa11.64□□□□□ -0.55
CCDC144A-209ENST00000436374 A0A087WTM6 91 aa11.63□□□□□ -0.55
CCDC144A-209ENST00000436374 KIAA0087Q14695 138 aa11.63□□□□□ -0.55
CCDC144A-209ENST00000436374 ANKRD39Q53RE8 183 aa11.63□□□□□ -0.55
CCDC144A-209ENST00000436374 TRBV30A0A0K0K1B3 111 aa11.62□□□□□ -0.55
CCDC144A-209ENST00000436374 HIGD2BQ4VC39 106 aa11.62□□□□□ -0.55
CCDC144A-209ENST00000436374 Q8N814 137 aa11.62□□□□□ -0.55
CCDC144A-209ENST00000436374 GCSHP23434 173 aa11.61□□□□□ -0.55
CCDC144A-209ENST00000436374 CNBPP62633 177 aaKnown RBP11.61□□□□□ -0.55
CCDC144A-209ENST00000436374 SYCNQ0VAF6 134 aa11.61□□□□□ -0.55
CCDC144A-209ENST00000436374 RNF151Q2KHN1 245 aa11.61□□□□□ -0.55
CCDC144A-209ENST00000436374 MAJINQ3KP22 176 aa11.61□□□□□ -0.55
CCDC144A-209ENST00000436374 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
CCDC144A-209ENST00000436374 LECT2O14960 151 aa11.6□□□□□ -0.55
CCDC144A-209ENST00000436374 DLEU1O43261 78 aa11.6□□□□□ -0.55
CCDC144A-209ENST00000436374 CIRBPQ14011 172 aaKnown RBP11.6□□□□□ -0.55
CCDC144A-209ENST00000436374 C12orf57Q99622 126 aa11.6□□□□□ -0.55
CCDC144A-209ENST00000436374 COX8AP10176 69 aa11.59□□□□□ -0.55
CCDC144A-209ENST00000436374 TNP2Q05952 138 aa11.59□□□□□ -0.55
CCDC144A-209ENST00000436374 COX17Q14061 63 aa11.59□□□□□ -0.55
CCDC144A-209ENST00000436374 ZNF625Q96I27 306 aaPredicted RBP11.59□□□□□ -0.55
CCDC144A-209ENST00000436374 CARD19Q96LW7 228 aa11.59□□□□□ -0.55
CCDC144A-209ENST00000436374 IGKV2D-26A0A0A0MRZ7 120 aa11.58□□□□□ -0.56
CCDC144A-209ENST00000436374 SLC25A34Q6PIV7 304 aa11.58□□□□□ -0.56
CCDC144A-209ENST00000436374 PCLOQ9Y6V0 5065 aa11.57□□□□□ -0.56
CCDC144A-209ENST00000436374 SCGB1D4Q6XE38 83 aa11.57□□□□□ -0.56
CCDC144A-209ENST00000436374 LINC00518Q8N0U6 118 aa11.57□□□□□ -0.56
CCDC144A-209ENST00000436374 TSPEAR-AS2P59090 65 aa11.56□□□□□ -0.56
CCDC144A-209ENST00000436374 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
CCDC144A-209ENST00000436374 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
CCDC144A-209ENST00000436374 TIMM17BO60830 172 aa11.55□□□□□ -0.56
CCDC144A-209ENST00000436374 MEIG1Q5JSS6 88 aa11.55□□□□□ -0.56
CCDC144A-209ENST00000436374 COPS9Q8WXC6 57 aa11.55□□□□□ -0.56
CCDC144A-209ENST00000436374 PGPEP1Q9NXJ5 209 aa11.55□□□□□ -0.56
CCDC144A-209ENST00000436374 LRP1BQ9NZR2 4599 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 C16orf90A8MZG2 172 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 TSTD3H0UI37 97 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 WFDC2Q14508 124 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 C2orf82Q6UX34 121 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 UNQ6190/PRO20217Q6UXQ8 127 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 UQCR10Q9UDW1 63 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 RYR1P21817 5038 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 HSPG2P98160 4391 aa11.54□□□□□ -0.56
CCDC144A-209ENST00000436374 TMEM238C9JI98 176 aa11.53□□□□□ -0.56
CCDC144A-209ENST00000436374 Q6ZRU5 148 aa11.53□□□□□ -0.56
CCDC144A-209ENST00000436374 PCP2Q8IVA1 136 aa11.53□□□□□ -0.56
CCDC144A-209ENST00000436374 ERG28Q9UKR5 140 aa11.53□□□□□ -0.56
CCDC144A-209ENST00000436374 Q6ZVH6 145 aa11.52□□□□□ -0.57
CCDC144A-209ENST00000436374 LINC00526Q96FQ7 95 aa11.52□□□□□ -0.57
CCDC144A-209ENST00000436374 C14orf144Q96I85 54 aa11.52□□□□□ -0.57
CCDC144A-209ENST00000436374 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.51□□□□□ -0.57
CCDC144A-209ENST00000436374 A0A0J9YXY3 114 aa11.51□□□□□ -0.57
CCDC144A-209ENST00000436374 TLX1NBP0CAT3 122 aa11.51□□□□□ -0.57
CCDC144A-209ENST00000436374 C6orf48Q9UBA6 75 aa11.51□□□□□ -0.57
CCDC144A-209ENST00000436374 IGLV5-52A0A0A0MRZ9 124 aa11.5□□□□□ -0.57
CCDC144A-209ENST00000436374 LOC107984640A0A0U1RRK4 108 aa11.5□□□□□ -0.57
CCDC144A-209ENST00000436374 NDUFC2-KCTD14E9PQ53 114 aa11.5□□□□□ -0.57
CCDC144A-209ENST00000436374 C9orf163Q8N9P6 203 aa11.5□□□□□ -0.57
CCDC144A-209ENST00000436374 LINC00158P58513 81 aa11.49□□□□□ -0.57
CCDC144A-209ENST00000436374 C10orf25Q5T742 122 aa11.49□□□□□ -0.57
CCDC144A-209ENST00000436374 HIGD1BQ9P298 99 aa11.49□□□□□ -0.57
CCDC144A-209ENST00000436374 LINC00474Q9P2X8 69 aa11.49□□□□□ -0.57
CCDC144A-209ENST00000436374 MIEN1Q9BRT3 115 aa11.48□□□□□ -0.57
CCDC144A-209ENST00000436374 SLPIP03973 132 aa11.47□□□□□ -0.57
CCDC144A-209ENST00000436374 TTTY13Q9BZ97 58 aa11.47□□□□□ -0.57
CCDC144A-209ENST00000436374 PFN2P35080 140 aa11.46□□□□□ -0.57
CCDC144A-209ENST00000436374 SPANXB1Q9NS25 103 aaPredicted RBP11.46□□□□□ -0.57
CCDC144A-209ENST00000436374 DNAH5Q8TE73 4624 aa11.46□□□□□ -0.58
CCDC144A-209ENST00000436374 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.58
CCDC144A-209ENST00000436374 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
CCDC144A-209ENST00000436374 IFITM1P13164 125 aa11.45□□□□□ -0.58
CCDC144A-209ENST00000436374 SPANXDQ9BXN6 97 aa11.45□□□□□ -0.58
CCDC144A-209ENST00000436374 KRTAP4-5Q9BYR2 181 aa11.45□□□□□ -0.58
CCDC144A-209ENST00000436374 PPDPFQ9H3Y8 114 aa11.45□□□□□ -0.58
CCDC144A-209ENST00000436374 SPANXCQ9NY87 97 aa11.45□□□□□ -0.58
CCDC144A-209ENST00000436374 ABCA13Q86UQ4 5058 aa11.44□□□□□ -0.58
CCDC144A-209ENST00000436374 SRSF9Q13242 221 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC144A-209ENST00000436374 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
CCDC144A-209ENST00000436374 PTTG1IPP53801 180 aa11.43□□□□□ -0.58
CCDC144A-209ENST00000436374 RPL18AQ02543 176 aaKnown RBP11.43□□□□□ -0.58
CCDC144A-209ENST00000436374 TAL2Q16559 108 aa11.43□□□□□ -0.58
CCDC144A-209ENST00000436374 C9orf116Q5BN46 136 aaPredicted RBP11.42□□□□□ -0.58
CCDC144A-209ENST00000436374 MIR7-3HGQ8N6C7 128 aa11.41□□□□□ -0.58
CCDC144A-209ENST00000436374 HIST1H4GQ99525 98 aa11.41□□□□□ -0.58
CCDC144A-209ENST00000436374 PRO1933Q9H354 126 aa11.41□□□□□ -0.58
CCDC144A-209ENST00000436374 LITAFQ99732 161 aa11.4□□□□□ -0.58
CCDC144A-209ENST00000436374 TP73-AS1Q9UF72 201 aa11.4□□□□□ -0.58
CCDC144A-209ENST00000436374 LOC107984156A0A0G2JMH3 177 aa11.39□□□□□ -0.59
CCDC144A-209ENST00000436374 KRTAP10-2P60368 255 aa11.39□□□□□ -0.59
CCDC144A-209ENST00000436374 SDIM1Q6ZPB5 146 aa11.39□□□□□ -0.59
CCDC144A-209ENST00000436374 Q6ZRP5 223 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms