RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MYO9AB2RTY4 2548 aa8.08□□□□□ -1.12
SCN4A-201ENST00000435607 A8MZ25 164 aa8.08□□□□□ -1.12
SCN4A-201ENST00000435607 WISP2O76076 250 aa8.08□□□□□ -1.12
SCN4A-201ENST00000435607 PCOTHQ58A44 107 aa8.07□□□□□ -1.12
SCN4A-201ENST00000435607 CRIP1P50238 77 aa8.07□□□□□ -1.12
SCN4A-201ENST00000435607 C1orf195Q5TG92 126 aa8.07□□□□□ -1.12
SCN4A-201ENST00000435607 LTBP2Q14767 1821 aa8.06□□□□□ -1.12
SCN4A-201ENST00000435607 POLR2KP53803 58 aaKnown RBP8.06□□□□□ -1.12
SCN4A-201ENST00000435607 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
SCN4A-201ENST00000435607 A0A087WSZ3 146 aa8.06□□□□□ -1.12
SCN4A-201ENST00000435607 PIEZO1Q92508 2521 aa8.06□□□□□ -1.12
SCN4A-201ENST00000435607 XGP55808 180 aa8.06□□□□□ -1.12
SCN4A-201ENST00000435607 LINC00575Q6W349 94 aa8.06□□□□□ -1.12
SCN4A-201ENST00000435607 MAPKAPK5-AS1Q8N8E1 139 aa8.06□□□□□ -1.12
SCN4A-201ENST00000435607 HCG22E2RYF7 251 aa8.05□□□□□ -1.12
SCN4A-201ENST00000435607 TRBV7-7A0A0K0K1E9 115 aa8.05□□□□□ -1.12
SCN4A-201ENST00000435607 PRLHP81277 87 aa8.05□□□□□ -1.12
SCN4A-201ENST00000435607 COL4A4P53420 1690 aaPredicted RBP8.04□□□□□ -1.12
SCN4A-201ENST00000435607 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
SCN4A-201ENST00000435607 ODF3L2Q3SX64 289 aa8.04□□□□□ -1.12
SCN4A-201ENST00000435607 LINC01561Q8N1V8 128 aa8.04□□□□□ -1.12
SCN4A-201ENST00000435607 C9orf116Q5BN46 136 aaPredicted RBP8.03□□□□□ -1.12
SCN4A-201ENST00000435607 A0A1B0GUV1 79 aa8.03□□□□□ -1.12
SCN4A-201ENST00000435607 F8P00451 2351 aa8.03□□□□□ -1.12
SCN4A-201ENST00000435607 FHL3Q13643 280 aa8.03□□□□□ -1.12
SCN4A-201ENST00000435607 LYPD5Q6UWN5 251 aa8.03□□□□□ -1.12
SCN4A-201ENST00000435607 FHL2Q14192 279 aa8.02□□□□□ -1.12
SCN4A-201ENST00000435607 Q6ZS46 218 aa8.02□□□□□ -1.12
SCN4A-201ENST00000435607 MDFIQ99750 246 aa8.02□□□□□ -1.12
SCN4A-201ENST00000435607 C16orf90A8MZG2 172 aa8.02□□□□□ -1.13
SCN4A-201ENST00000435607 C11orf1Q9H5F2 150 aa8.02□□□□□ -1.13
SCN4A-201ENST00000435607 C1orf229Q6ZS94 237 aaPredicted RBP8.02□□□□□ -1.13
SCN4A-201ENST00000435607 FN1P02751 2386 aaKnown RBP8.02□□□□□ -1.13
SCN4A-201ENST00000435607 PRM2P04554 102 aa8.01□□□□□ -1.13
SCN4A-201ENST00000435607 LINC00242Q5T6M2 205 aa8.01□□□□□ -1.13
SCN4A-201ENST00000435607 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
SCN4A-201ENST00000435607 ACYP2P14621 99 aa8□□□□□ -1.13
SCN4A-201ENST00000435607 EIF4EBP1Q13541 118 aaPredicted RBP8□□□□□ -1.13
SCN4A-201ENST00000435607 PRR9Q5T870 116 aa8□□□□□ -1.13
SCN4A-201ENST00000435607 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
SCN4A-201ENST00000435607 A0A1B0GU69 56 aa7.99□□□□□ -1.13
SCN4A-201ENST00000435607 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
SCN4A-201ENST00000435607 ATP11AUNQ6ZP68 121 aa7.99□□□□□ -1.13
SCN4A-201ENST00000435607 SMIM1B2RUZ4 78 aa7.99□□□□□ -1.13
SCN4A-201ENST00000435607 BEAN1Q3B7T3 259 aa7.99□□□□□ -1.13
SCN4A-201ENST00000435607 SMCR5Q8TEV8 140 aa7.99□□□□□ -1.13
SCN4A-201ENST00000435607 DNAH12Q6ZR08 3092 aa7.99□□□□□ -1.13
SCN4A-201ENST00000435607 CRYGAP11844 174 aa7.98□□□□□ -1.13
SCN4A-201ENST00000435607 COL5A1P20908 1838 aaPredicted RBP7.98□□□□□ -1.13
SCN4A-201ENST00000435607 BRWD1-AS2P59051 145 aa7.97□□□□□ -1.13
SCN4A-201ENST00000435607 IGLV4-60A0A075B6I1 120 aa7.97□□□□□ -1.13
SCN4A-201ENST00000435607 C1orf64Q8NEQ6 169 aa7.97□□□□□ -1.13
SCN4A-201ENST00000435607 ZNF580Q9UK33 172 aa7.97□□□□□ -1.13
SCN4A-201ENST00000435607 JMJD1CQ15652 2540 aa7.97□□□□□ -1.13
SCN4A-201ENST00000435607 MOBPQ13875 183 aa7.96□□□□□ -1.13
SCN4A-201ENST00000435607 Q8N3U1 123 aa7.96□□□□□ -1.13
SCN4A-201ENST00000435607 C22orf24Q9Y442 160 aa7.96□□□□□ -1.13
SCN4A-201ENST00000435607 LRP4O75096 1905 aa7.96□□□□□ -1.14
SCN4A-201ENST00000435607 ADAMTS20P59510 1910 aa7.96□□□□□ -1.14
SCN4A-201ENST00000435607 CNFNQ9BYD5 112 aa7.96□□□□□ -1.14
SCN4A-201ENST00000435607 Q6ZRP5 223 aa7.95□□□□□ -1.14
SCN4A-201ENST00000435607 IGIPA6NJ69 53 aa7.95□□□□□ -1.14
SCN4A-201ENST00000435607 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
SCN4A-201ENST00000435607 AVPP01185 164 aa7.95□□□□□ -1.14
SCN4A-201ENST00000435607 CRIP2P52943 208 aaPredicted RBP7.95□□□□□ -1.14
SCN4A-201ENST00000435607 PRR3P79522 188 aaKnown RBP7.95□□□□□ -1.14
SCN4A-201ENST00000435607 KRTAP10-9P60411 292 aa7.94□□□□□ -1.14
SCN4A-201ENST00000435607 SOSTDC1Q6X4U4 206 aa7.94□□□□□ -1.14
SCN4A-201ENST00000435607 LINC00313P59037 77 aa7.94□□□□□ -1.14
SCN4A-201ENST00000435607 SPAG11AQ6PDA7 123 aa7.94□□□□□ -1.14
SCN4A-201ENST00000435607 C11orf21Q9P2W6 132 aa7.94□□□□□ -1.14
SCN4A-201ENST00000435607 KIF25-AS1Q9Y6Z4 181 aa7.94□□□□□ -1.14
SCN4A-201ENST00000435607 Q6ZRU5 148 aa7.94□□□□□ -1.14
SCN4A-201ENST00000435607 PSPHP1O15172 72 aa7.93□□□□□ -1.14
SCN4A-201ENST00000435607 CPAMD8Q8IZJ3 1885 aa7.92□□□□□ -1.14
SCN4A-201ENST00000435607 A0A087WYN8 130 aa7.92□□□□□ -1.14
SCN4A-201ENST00000435607 WWC2-AS2Q96NR7 200 aa7.91□□□□□ -1.14
SCN4A-201ENST00000435607 TLN1Q9Y490 2541 aaKnown RBP7.91□□□□□ -1.14
SCN4A-201ENST00000435607 TLN2Q9Y4G6 2542 aa7.9□□□□□ -1.14
SCN4A-201ENST00000435607 CXCL6P80162 114 aa7.9□□□□□ -1.14
SCN4A-201ENST00000435607 ABCA12Q86UK0 2595 aa7.9□□□□□ -1.14
SCN4A-201ENST00000435607 C6orf48Q9UBA6 75 aa7.9□□□□□ -1.15
SCN4A-201ENST00000435607 LINC00694P0DN24 101 aa7.89□□□□□ -1.15
SCN4A-201ENST00000435607 PRO3102Q9H379 93 aa7.89□□□□□ -1.15
SCN4A-201ENST00000435607 RTL8CO15255 209 aa7.89□□□□□ -1.15
SCN4A-201ENST00000435607 Q8NBF4 154 aa7.89□□□□□ -1.15
SCN4A-201ENST00000435607 A0A1B0GW54 56 aa7.88□□□□□ -1.15
SCN4A-201ENST00000435607 AMELXQ99217 191 aa7.88□□□□□ -1.15
SCN4A-201ENST00000435607 RPL37AP61513 92 aaKnown RBP7.87□□□□□ -1.15
SCN4A-201ENST00000435607 TMEM254Q8TBM7 123 aa7.87□□□□□ -1.15
SCN4A-201ENST00000435607 ACANP16112 2415 aa7.87□□□□□ -1.15
SCN4A-201ENST00000435607 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
SCN4A-201ENST00000435607 H3BNG1 76 aa7.86□□□□□ -1.15
SCN4A-201ENST00000435607 C2orf91Q6ZV80 131 aa7.86□□□□□ -1.15
SCN4A-201ENST00000435607 ZNF295-AS1Q8N0V1 137 aa7.85□□□□□ -1.15
SCN4A-201ENST00000435607 KIAA0087Q14695 138 aa7.85□□□□□ -1.15
SCN4A-201ENST00000435607 PIEZO2Q9H5I5 2752 aa7.85□□□□□ -1.15
SCN4A-201ENST00000435607 CDSNQ15517 529 aa7.85□□□□□ -1.15
SCN4A-201ENST00000435607 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.15
SCN4A-201ENST00000435607 Q96NJ1 140 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms