RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 COX7A2LO14548 114 aa11.5□□□□□ -0.57
LIMK1-203ENST00000435201 HTN3P15516 51 aa11.5□□□□□ -0.57
LIMK1-203ENST00000435201 LELP1Q5T871 98 aa11.5□□□□□ -0.57
LIMK1-203ENST00000435201 ANGP03950 147 aaKnown RBP11.49□□□□□ -0.57
LIMK1-203ENST00000435201 REG3AQ06141 175 aa11.49□□□□□ -0.57
LIMK1-203ENST00000435201 KRTAP24-1Q3LI83 254 aa11.49□□□□□ -0.57
LIMK1-203ENST00000435201 OXLD1Q5BKU9 147 aa11.49□□□□□ -0.57
LIMK1-203ENST00000435201 SIGMAR1Q99720 223 aa11.49□□□□□ -0.57
LIMK1-203ENST00000435201 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
LIMK1-203ENST00000435201 CRPP02741 224 aa11.49□□□□□ -0.57
LIMK1-203ENST00000435201 F8P00451 2351 aa11.48□□□□□ -0.57
LIMK1-203ENST00000435201 C21orf62-AS1Q17RA5 79 aa11.48□□□□□ -0.57
LIMK1-203ENST00000435201 C2orf82Q6UX34 121 aa11.48□□□□□ -0.57
LIMK1-203ENST00000435201 CHCHD10Q8WYQ3 142 aaPredicted RBP11.48□□□□□ -0.57
LIMK1-203ENST00000435201 KRTAP10-11P60412 298 aa11.47□□□□□ -0.57
LIMK1-203ENST00000435201 EGFEM1PQ0D2K5 195 aa11.47□□□□□ -0.57
LIMK1-203ENST00000435201 CCL18P55774 89 aa11.46□□□□□ -0.57
LIMK1-203ENST00000435201 PFN2P35080 140 aa11.46□□□□□ -0.58
LIMK1-203ENST00000435201 CXCL5P42830 114 aa11.46□□□□□ -0.58
LIMK1-203ENST00000435201 C3orf56Q8N813 242 aa11.46□□□□□ -0.58
LIMK1-203ENST00000435201 NTN5Q8WTR8 489 aaPredicted RBP11.46□□□□□ -0.58
LIMK1-203ENST00000435201 C11orf68Q9H3H3 251 aaKnown RBP11.45□□□□□ -0.58
LIMK1-203ENST00000435201 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
LIMK1-203ENST00000435201 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
LIMK1-203ENST00000435201 CKS1BP61024 79 aa11.44□□□□□ -0.58
LIMK1-203ENST00000435201 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
LIMK1-203ENST00000435201 Q8N3U1 123 aa11.44□□□□□ -0.58
LIMK1-203ENST00000435201 MALP21145 153 aa11.44□□□□□ -0.58
LIMK1-203ENST00000435201 RPL28P46779 137 aaKnown RBP11.44□□□□□ -0.58
LIMK1-203ENST00000435201 LINC00337Q8N6G1 96 aa11.44□□□□□ -0.58
LIMK1-203ENST00000435201 UBE2WQ96B02 151 aa11.44□□□□□ -0.58
LIMK1-203ENST00000435201 IGLV10-54A0A075B6I4 117 aa11.42□□□□□ -0.58
LIMK1-203ENST00000435201 H3BNG1 76 aa11.42□□□□□ -0.58
LIMK1-203ENST00000435201 KIAA0087Q14695 138 aa11.42□□□□□ -0.58
LIMK1-203ENST00000435201 CDIP1Q9H305 208 aa11.42□□□□□ -0.58
LIMK1-203ENST00000435201 TRACP01848 142 aa11.42□□□□□ -0.58
LIMK1-203ENST00000435201 SCGB1A1P11684 91 aa11.41□□□□□ -0.58
LIMK1-203ENST00000435201 COX17Q14061 63 aa11.41□□□□□ -0.58
LIMK1-203ENST00000435201 RETNQ9HD89 108 aa11.41□□□□□ -0.58
LIMK1-203ENST00000435201 CMYA5Q8N3K9 4069 aa11.41□□□□□ -0.58
LIMK1-203ENST00000435201 LYPD5Q6UWN5 251 aa11.4□□□□□ -0.58
LIMK1-203ENST00000435201 PRR34Q9NV39 138 aa11.4□□□□□ -0.58
LIMK1-203ENST00000435201 TEX49A0A1B0GTD5 131 aa11.4□□□□□ -0.59
LIMK1-203ENST00000435201 KLK5Q9Y337 293 aaPredicted RBP11.38□□□□□ -0.59
LIMK1-203ENST00000435201 KLK12Q9UKR0 248 aa11.37□□□□□ -0.59
LIMK1-203ENST00000435201 KPRPQ5T749 579 aaPredicted RBP11.36□□□□□ -0.59
LIMK1-203ENST00000435201 SMIM11BQ8TCY0 68 aa11.36□□□□□ -0.59
LIMK1-203ENST00000435201 H0YGX0 51 aa11.35□□□□□ -0.59
LIMK1-203ENST00000435201 DEFB121Q5J5C9 76 aa11.35□□□□□ -0.59
LIMK1-203ENST00000435201 DNAH3Q8TD57 4116 aa11.34□□□□□ -0.59
LIMK1-203ENST00000435201 TRAV8-4A0A0B4J246 113 aa11.34□□□□□ -0.59
LIMK1-203ENST00000435201 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
LIMK1-203ENST00000435201 ENHOQ6UWT2 76 aa11.34□□□□□ -0.59
LIMK1-203ENST00000435201 Q6ZTC4 211 aa11.34□□□□□ -0.59
LIMK1-203ENST00000435201 MUC7Q8TAX7 377 aa11.34□□□□□ -0.59
LIMK1-203ENST00000435201 FAM218AQ96MZ4 157 aa11.34□□□□□ -0.59
LIMK1-203ENST00000435201 NDUFC2O95298 119 aa11.34□□□□□ -0.59
LIMK1-203ENST00000435201 FLNBO75369 2602 aaKnown RBP11.33□□□□□ -0.6
LIMK1-203ENST00000435201 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.6
LIMK1-203ENST00000435201 XGP55808 180 aa11.32□□□□□ -0.6
LIMK1-203ENST00000435201 A0A0J9YWU9 116 aa11.3□□□□□ -0.6
LIMK1-203ENST00000435201 BAALC-AS2P0C853 105 aa11.3□□□□□ -0.6
LIMK1-203ENST00000435201 ANK2Q01484 3957 aa11.3□□□□□ -0.6
LIMK1-203ENST00000435201 MT-ATP8P03928 68 aa11.29□□□□□ -0.6
LIMK1-203ENST00000435201 WFDC10BQ8IUB3 73 aa11.29□□□□□ -0.6
LIMK1-203ENST00000435201 FAM240AA0A1B0GVK7 77 aa11.29□□□□□ -0.6
LIMK1-203ENST00000435201 DNAL4O96015 105 aa11.29□□□□□ -0.6
LIMK1-203ENST00000435201 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
LIMK1-203ENST00000435201 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
LIMK1-203ENST00000435201 UNQ6190/PRO20217Q6UXQ8 127 aa11.27□□□□□ -0.6
LIMK1-203ENST00000435201 C6orf223Q8N319 242 aa11.27□□□□□ -0.6
LIMK1-203ENST00000435201 FBN1P35555 2871 aaKnown RBP11.27□□□□□ -0.6
LIMK1-203ENST00000435201 A0A087WYN8 130 aa11.27□□□□□ -0.61
LIMK1-203ENST00000435201 GVQW2A0A096LPI5 108 aaPredicted RBP11.27□□□□□ -0.61
LIMK1-203ENST00000435201 CYSRT1A8MQ03 144 aa11.27□□□□□ -0.61
LIMK1-203ENST00000435201 STAB1Q9NY15 2570 aa11.27□□□□□ -0.61
LIMK1-203ENST00000435201 DEFB131BA0A096LNP1 70 aa11.26□□□□□ -0.61
LIMK1-203ENST00000435201 NANOS2P60321 138 aaKnown RBP11.26□□□□□ -0.61
LIMK1-203ENST00000435201 C10orf25Q5T742 122 aa11.26□□□□□ -0.61
LIMK1-203ENST00000435201 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
LIMK1-203ENST00000435201 Q9HAA7 133 aa11.26□□□□□ -0.61
LIMK1-203ENST00000435201 ESRGQ1W209 222 aa11.25□□□□□ -0.61
LIMK1-203ENST00000435201 C22orf24Q9Y442 160 aa11.23□□□□□ -0.61
LIMK1-203ENST00000435201 PKD1L1Q8TDX9 2849 aa11.23□□□□□ -0.61
LIMK1-203ENST00000435201 LECT2O14960 151 aa11.23□□□□□ -0.61
LIMK1-203ENST00000435201 INAFM2P0DMQ5 153 aa11.23□□□□□ -0.61
LIMK1-203ENST00000435201 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
LIMK1-203ENST00000435201 LINC00526Q96FQ7 95 aa11.23□□□□□ -0.61
LIMK1-203ENST00000435201 A0A1B0GX51 115 aa11.22□□□□□ -0.61
LIMK1-203ENST00000435201 SNCGO76070 127 aa11.22□□□□□ -0.61
LIMK1-203ENST00000435201 ACYP1P07311 99 aa11.22□□□□□ -0.61
LIMK1-203ENST00000435201 MAST4O15021 2626 aa11.21□□□□□ -0.61
LIMK1-203ENST00000435201 LINC01556Q5JQF7 62 aa11.21□□□□□ -0.61
LIMK1-203ENST00000435201 KRTAP26-1Q6PEX3 210 aa11.21□□□□□ -0.61
LIMK1-203ENST00000435201 ZNF561-AS1K7EIQ3 104 aa11.2□□□□□ -0.62
LIMK1-203ENST00000435201 NCR3O14931 201 aa11.2□□□□□ -0.62
LIMK1-203ENST00000435201 C6orf48Q9UBA6 75 aa11.2□□□□□ -0.62
LIMK1-203ENST00000435201 S100A7L2Q5SY68 101 aa11.19□□□□□ -0.62
LIMK1-203ENST00000435201 C15orf53Q8NAA6 179 aa11.19□□□□□ -0.62
LIMK1-203ENST00000435201 Q8NDZ9 215 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms