RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 Q6Q795 121 aa10.96□□□□□ -0.66
SCARF1-203ENST00000434376 CDC42SE2Q9NRR3 84 aa10.96□□□□□ -0.66
SCARF1-203ENST00000434376 A8MTW9 85 aa10.95□□□□□ -0.66
SCARF1-203ENST00000434376 PAX4O43316 350 aa10.95□□□□□ -0.66
SCARF1-203ENST00000434376 PPDPFQ9H3Y8 114 aa10.95□□□□□ -0.66
SCARF1-203ENST00000434376 M0QXV9 152 aa10.94□□□□□ -0.66
SCARF1-203ENST00000434376 HERVK_113P63121 156 aa10.94□□□□□ -0.66
SCARF1-203ENST00000434376 CSNK1G2-AS1Q8NCQ2 148 aa10.94□□□□□ -0.66
SCARF1-203ENST00000434376 SMIM1B2RUZ4 78 aa10.93□□□□□ -0.66
SCARF1-203ENST00000434376 SMCR5Q8TEV8 140 aa10.93□□□□□ -0.66
SCARF1-203ENST00000434376 IGKV3D-7A0A0C4DH55 119 aa10.93□□□□□ -0.66
SCARF1-203ENST00000434376 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
SCARF1-203ENST00000434376 C16orf95Q9H693 158 aa10.93□□□□□ -0.66
SCARF1-203ENST00000434376 CELA1Q9UNI1 258 aa10.93□□□□□ -0.66
SCARF1-203ENST00000434376 DAD1P61803 113 aa10.92□□□□□ -0.66
SCARF1-203ENST00000434376 LOC107984640A0A0U1RRK4 108 aa10.92□□□□□ -0.66
SCARF1-203ENST00000434376 C6orf226Q5I0X4 101 aa10.92□□□□□ -0.66
SCARF1-203ENST00000434376 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
SCARF1-203ENST00000434376 DNAL4O96015 105 aa10.92□□□□□ -0.66
SCARF1-203ENST00000434376 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
SCARF1-203ENST00000434376 MIR7-3HGQ8N6C7 128 aa10.91□□□□□ -0.66
SCARF1-203ENST00000434376 COX7A2LO14548 114 aa10.91□□□□□ -0.66
SCARF1-203ENST00000434376 ATP5G1P05496 136 aa10.91□□□□□ -0.66
SCARF1-203ENST00000434376 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
SCARF1-203ENST00000434376 LINC00269Q8N2A0 174 aa10.91□□□□□ -0.66
SCARF1-203ENST00000434376 IGHV4-28A0A0C4DH34 117 aa10.9□□□□□ -0.66
SCARF1-203ENST00000434376 STAB2Q8WWQ8 2551 aa10.9□□□□□ -0.66
SCARF1-203ENST00000434376 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
SCARF1-203ENST00000434376 FAM218AQ96MZ4 157 aa10.9□□□□□ -0.66
SCARF1-203ENST00000434376 NDUFA1O15239 70 aa10.89□□□□□ -0.67
SCARF1-203ENST00000434376 TIRAPP58753 221 aa10.89□□□□□ -0.67
SCARF1-203ENST00000434376 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
SCARF1-203ENST00000434376 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
SCARF1-203ENST00000434376 TENM2Q9NT68 2774 aa10.88□□□□□ -0.67
SCARF1-203ENST00000434376 C9orf116Q5BN46 136 aaPredicted RBP10.88□□□□□ -0.67
SCARF1-203ENST00000434376 CRPP02741 224 aa10.88□□□□□ -0.67
SCARF1-203ENST00000434376 X6R8D5 127 aa10.87□□□□□ -0.67
SCARF1-203ENST00000434376 CFAP161Q6P656 301 aa10.87□□□□□ -0.67
SCARF1-203ENST00000434376 MRAPQ8TCY5 172 aa10.87□□□□□ -0.67
SCARF1-203ENST00000434376 FAM240AA0A1B0GVK7 77 aa10.86□□□□□ -0.67
SCARF1-203ENST00000434376 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
SCARF1-203ENST00000434376 SLPIP03973 132 aa10.86□□□□□ -0.67
SCARF1-203ENST00000434376 LINC00643Q86TS7 51 aa10.86□□□□□ -0.67
SCARF1-203ENST00000434376 C9orf66Q5T8R8 295 aa10.86□□□□□ -0.67
SCARF1-203ENST00000434376 IGHV4-30-4P0DP06 118 aa10.85□□□□□ -0.67
SCARF1-203ENST00000434376 CMC4P56277 68 aaPredicted RBP10.85□□□□□ -0.67
SCARF1-203ENST00000434376 IL17DQ8TAD2 202 aa10.85□□□□□ -0.67
SCARF1-203ENST00000434376 COX7B2Q8TF08 81 aa10.85□□□□□ -0.67
SCARF1-203ENST00000434376 hADV29S1A0JD25 119 aa10.85□□□□□ -0.67
SCARF1-203ENST00000434376 TRBV7-7A0A0K0K1E9 115 aa10.84□□□□□ -0.67
SCARF1-203ENST00000434376 A0A087WVE0 104 aa10.84□□□□□ -0.67
SCARF1-203ENST00000434376 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
SCARF1-203ENST00000434376 KLK12Q9UKR0 248 aa10.84□□□□□ -0.67
SCARF1-203ENST00000434376 HIST1H4AP62805 103 aaKnown RBP10.84□□□□□ -0.67
SCARF1-203ENST00000434376 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
SCARF1-203ENST00000434376 MALP21145 153 aa10.83□□□□□ -0.68
SCARF1-203ENST00000434376 ACYP1P07311 99 aa10.83□□□□□ -0.68
SCARF1-203ENST00000434376 TMEM126AQ9H061 195 aa10.83□□□□□ -0.68
SCARF1-203ENST00000434376 SND1-IT1Q9HBX3 110 aa10.83□□□□□ -0.68
SCARF1-203ENST00000434376 LINC00959A0A1B0GUT2 108 aa10.81□□□□□ -0.68
SCARF1-203ENST00000434376 LECT2O14960 151 aa10.81□□□□□ -0.68
SCARF1-203ENST00000434376 A0A087WYN8 130 aa10.81□□□□□ -0.68
SCARF1-203ENST00000434376 A0A1B0GX51 115 aa10.81□□□□□ -0.68
SCARF1-203ENST00000434376 NCR3O14931 201 aa10.81□□□□□ -0.68
SCARF1-203ENST00000434376 TIMM17BO60830 172 aa10.81□□□□□ -0.68
SCARF1-203ENST00000434376 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
SCARF1-203ENST00000434376 INAFM2P0DMQ5 153 aa10.8□□□□□ -0.68
SCARF1-203ENST00000434376 COPS9Q8WXC6 57 aa10.8□□□□□ -0.68
SCARF1-203ENST00000434376 OVOL2Q9BRP0 275 aa10.8□□□□□ -0.68
SCARF1-203ENST00000434376 UQCRQO14949 82 aa10.79□□□□□ -0.68
SCARF1-203ENST00000434376 SS18Q15532 418 aa10.79□□□□□ -0.68
SCARF1-203ENST00000434376 C6orf223Q8N319 242 aa10.79□□□□□ -0.68
SCARF1-203ENST00000434376 LINC00337Q8N6G1 96 aa10.79□□□□□ -0.68
SCARF1-203ENST00000434376 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
SCARF1-203ENST00000434376 WFDC9Q8NEX5 89 aa10.78□□□□□ -0.68
SCARF1-203ENST00000434376 IGLV5-39A0A0G2JS06 123 aa10.77□□□□□ -0.69
SCARF1-203ENST00000434376 TRACP01848 142 aa10.77□□□□□ -0.69
SCARF1-203ENST00000434376 APOC4P55056 127 aa10.77□□□□□ -0.69
SCARF1-203ENST00000434376 SMIM11BQ8TCY0 68 aa10.77□□□□□ -0.69
SCARF1-203ENST00000434376 IGHV3OR16-9A0A0B4J2B5 98 aa10.76□□□□□ -0.69
SCARF1-203ENST00000434376 TRAV13-2A0A0B4J235 113 aa10.76□□□□□ -0.69
SCARF1-203ENST00000434376 CHCHD10Q8WYQ3 142 aaPredicted RBP10.75□□□□□ -0.69
SCARF1-203ENST00000434376 CCL18P55774 89 aa10.75□□□□□ -0.69
SCARF1-203ENST00000434376 REG3AQ06141 175 aa10.75□□□□□ -0.69
SCARF1-203ENST00000434376 IMUPQ9GZP8 106 aa10.75□□□□□ -0.69
SCARF1-203ENST00000434376 HIGD2BQ4VC39 106 aa10.74□□□□□ -0.69
SCARF1-203ENST00000434376 IGLV5-45A0A087WSX0 123 aa10.74□□□□□ -0.69
SCARF1-203ENST00000434376 COX7CP15954 63 aa10.74□□□□□ -0.69
SCARF1-203ENST00000434376 SPART-AS1P0CW21 52 aa10.73□□□□□ -0.69
SCARF1-203ENST00000434376 LINC00846Q9NV44 126 aa10.73□□□□□ -0.69
SCARF1-203ENST00000434376 LINC01600Q96MT4 127 aa10.73□□□□□ -0.69
SCARF1-203ENST00000434376 CSMD3Q7Z407 3707 aa10.73□□□□□ -0.69
SCARF1-203ENST00000434376 CYSTM1Q9H1C7 97 aa10.73□□□□□ -0.69
SCARF1-203ENST00000434376 XAGE1AQ9HD64 81 aa10.73□□□□□ -0.69
SCARF1-203ENST00000434376 KIR2DL5BQ8NHK3 375 aa10.72□□□□□ -0.69
SCARF1-203ENST00000434376 Q6ZTC4 211 aa10.72□□□□□ -0.69
SCARF1-203ENST00000434376 DSCR8Q96T75 97 aa10.72□□□□□ -0.69
SCARF1-203ENST00000434376 FAM19A5Q7Z5A7 132 aaPredicted RBP10.71□□□□□ -0.69
SCARF1-203ENST00000434376 CSDC2Q9Y534 153 aaKnown RBP10.71□□□□□ -0.69
SCARF1-203ENST00000434376 KRTAP24-1Q3LI83 254 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms