RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 DIP2CQ9Y2E4 1556 aa0.28□□□□□ -2.37
PTPN4-205ENST00000433888 TSC2P49815 1807 aa0.27□□□□□ -2.37
PTPN4-205ENST00000433888 LRP1Q07954 4544 aaKnown RBP0.27□□□□□ -2.37
PTPN4-205ENST00000433888 CSMD3Q7Z407 3707 aa0.27□□□□□ -2.37
PTPN4-205ENST00000433888 LEPROTL1O95214 131 aa0.27□□□□□ -2.37
PTPN4-205ENST00000433888 WFDC2Q14508 124 aa0.27□□□□□ -2.37
PTPN4-205ENST00000433888 DEFB109BQ30KR1 87 aa0.27□□□□□ -2.37
PTPN4-205ENST00000433888 GAPVD1Q14C86 1478 aa0.27□□□□□ -2.37
PTPN4-205ENST00000433888 ZFYVE26Q68DK2 2539 aa0.27□□□□□ -2.37
PTPN4-205ENST00000433888 MYH4Q9Y623 1939 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 TRBV7-4A0A0J9YYF1 115 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 KLK9Q2XQG4 91 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 C6orf201Q7Z4U5 140 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 U3KQA8 63 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 RAPGEF2Q9Y4G8 1499 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 NHSL1Q5SYE7 1610 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 PPRC1Q5VV67 1664 aaKnown RBP0.26□□□□□ -2.37
PTPN4-205ENST00000433888 FMN2Q9NZ56 1722 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 UNC79Q9P2D8 2635 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 PIEZO2Q9H5I5 2752 aa0.26□□□□□ -2.37
PTPN4-205ENST00000433888 DNAJC13O75165 2243 aa0.25□□□□□ -2.37
PTPN4-205ENST00000433888 TRBV7-7A0A0K0K1E9 115 aa0.25□□□□□ -2.37
PTPN4-205ENST00000433888 H0Y9P7 68 aa0.25□□□□□ -2.37
PTPN4-205ENST00000433888 H3BQF6 201 aa0.25□□□□□ -2.37
PTPN4-205ENST00000433888 SPRR1BP22528 89 aa0.25□□□□□ -2.37
PTPN4-205ENST00000433888 SPRR1AP35321 89 aa0.25□□□□□ -2.37
PTPN4-205ENST00000433888 ETDBQ3ZM63 59 aa0.25□□□□□ -2.37
PTPN4-205ENST00000433888 LINC00846Q9NV44 126 aa0.25□□□□□ -2.37
PTPN4-205ENST00000433888 URB1O60287 2271 aaKnown RBP0.25□□□□□ -2.37
PTPN4-205ENST00000433888 XRN1Q8IZH2 1706 aaKnown RBP0.24□□□□□ -2.37
PTPN4-205ENST00000433888 CLTCQ00610 1675 aaKnown RBP0.24□□□□□ -2.37
PTPN4-205ENST00000433888 D6R8Y8 96 aa0.24□□□□□ -2.37
PTPN4-205ENST00000433888 ZNF720Q7Z2F6 126 aa0.24□□□□□ -2.37
PTPN4-205ENST00000433888 MUSTN1Q8IVN3 82 aa0.24□□□□□ -2.37
PTPN4-205ENST00000433888 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
PTPN4-205ENST00000433888 RGPD4Q7Z3J3 1758 aa0.24□□□□□ -2.37
PTPN4-205ENST00000433888 C2CD3Q4AC94 2353 aa0.24□□□□□ -2.37
PTPN4-205ENST00000433888 BAZ1AQ9NRL2 1556 aaPredicted RBP0.23□□□□□ -2.37
PTPN4-205ENST00000433888 EDC4Q6P2E9 1401 aaKnown RBP0.23□□□□□ -2.37
PTPN4-205ENST00000433888 PTPRQQ9UMZ3 2332 aa0.23□□□□□ -2.37
PTPN4-205ENST00000433888 K7EQZ3 153 aa0.23□□□□□ -2.37
PTPN4-205ENST00000433888 APLNQ9ULZ1 77 aa0.23□□□□□ -2.37
PTPN4-205ENST00000433888 RGPD3A6NKT7 1758 aaPredicted RBP0.23□□□□□ -2.37
PTPN4-205ENST00000433888 SMARCA2P51531 1590 aa0.23□□□□□ -2.37
PTPN4-205ENST00000433888 SPTBN2O15020 2390 aa0.23□□□□□ -2.37
PTPN4-205ENST00000433888 DOPEY2Q9Y3R5 2298 aa0.22□□□□□ -2.37
PTPN4-205ENST00000433888 PKD1L1Q8TDX9 2849 aa0.22□□□□□ -2.37
PTPN4-205ENST00000433888 COX6B1P14854 86 aa0.22□□□□□ -2.37
PTPN4-205ENST00000433888 DEFB112Q30KQ8 113 aa0.22□□□□□ -2.37
PTPN4-205ENST00000433888 TULP4Q9NRJ4 1543 aa0.22□□□□□ -2.37
PTPN4-205ENST00000433888 VWFP04275 2813 aa0.22□□□□□ -2.37
PTPN4-205ENST00000433888 UBR1Q8IWV7 1749 aa0.21□□□□□ -2.38
PTPN4-205ENST00000433888 C5P01031 1676 aa0.21□□□□□ -2.38
PTPN4-205ENST00000433888 GOLGA4Q13439 2230 aaKnown RBP0.21□□□□□ -2.38
PTPN4-205ENST00000433888 TARBP1Q13395 1621 aaKnown RBP0.21□□□□□ -2.38
PTPN4-205ENST00000433888 IGLC2P0DOY2 106 aa0.21□□□□□ -2.38
PTPN4-205ENST00000433888 IGLC3P0DOY3 106 aa0.21□□□□□ -2.38
PTPN4-205ENST00000433888 DEFB123Q8N688 67 aa0.21□□□□□ -2.38
PTPN4-205ENST00000433888 V9GYS6 101 aa0.21□□□□□ -2.38
PTPN4-205ENST00000433888 ANKRD17O75179 2603 aaKnown RBP0.21□□□□□ -2.38
PTPN4-205ENST00000433888 PTPRZ1P23471 2315 aaPredicted RBP0.21□□□□□ -2.38
PTPN4-205ENST00000433888 UBR5O95071 2799 aaPredicted RBP0.2□□□□□ -2.38
PTPN4-205ENST00000433888 SLIT1O75093 1534 aa0.2□□□□□ -2.38
PTPN4-205ENST00000433888 CPSF4LA6NMK7 179 aaKnown RBP0.2□□□□□ -2.38
PTPN4-205ENST00000433888 GYPAP02724 150 aa0.2□□□□□ -2.38
PTPN4-205ENST00000433888 PEA15Q15121 130 aa0.2□□□□□ -2.38
PTPN4-205ENST00000433888 Q5VSD8 79 aa0.2□□□□□ -2.38
PTPN4-205ENST00000433888 DEFB105AQ8NG35 78 aa0.2□□□□□ -2.38
PTPN4-205ENST00000433888 SETBP1Q9Y6X0 1596 aa0.19□□□□□ -2.38
PTPN4-205ENST00000433888 CRYBG1Q9Y4K1 1723 aa0.19□□□□□ -2.38
PTPN4-205ENST00000433888 FAT2Q9NYQ8 4349 aa0.19□□□□□ -2.38
PTPN4-205ENST00000433888 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
PTPN4-205ENST00000433888 SHPRHQ149N8 1683 aa0.19□□□□□ -2.38
PTPN4-205ENST00000433888 CYB5AP00167 134 aa0.19□□□□□ -2.38
PTPN4-205ENST00000433888 S100A16Q96FQ6 103 aaKnown RBP0.19□□□□□ -2.38
PTPN4-205ENST00000433888 NCOR1O75376 2440 aa0.19□□□□□ -2.38
PTPN4-205ENST00000433888 A0A0G2JMZ2 1700 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 TENM4Q6N022 2769 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 CHD6Q8TD26 2715 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 KIF20BQ96Q89 1820 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 IQCF6A8MYZ5 107 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 K7EP34 96 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 GNG2P59768 71 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 C9orf62Q8N4C0 152 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 CUX1P39880 1505 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 NEXMIFQ5QGS0 1516 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 BSNQ9UPA5 3926 aa0.18□□□□□ -2.38
PTPN4-205ENST00000433888 ATP10BO94823 1461 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 KIAA0556O60303 1618 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 RGPD2P0DJD1 1756 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 TDRG1Q3Y452 100 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 PYY3Q5JQD4 70 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 LELP1Q5T871 98 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 TTC37Q6PGP7 1564 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 USMG5Q96IX5 58 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 KIAA1551Q9HCM1 1747 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 PKDREJQ9NTG1 2253 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
PTPN4-205ENST00000433888 COL14A1Q05707 1796 aaKnown RBP0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms