RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TIMM17BO60830 172 aa2.53□□□□□ -2
USP54-206ENST00000433394 SAA1P0DJI8 122 aaPredicted RBP2.53□□□□□ -2
USP54-206ENST00000433394 IGLC2P0DOY2 106 aa2.53□□□□□ -2
USP54-206ENST00000433394 IGLC3P0DOY3 106 aa2.53□□□□□ -2
USP54-206ENST00000433394 PMCHL1Q16048 86 aa2.53□□□□□ -2
USP54-206ENST00000433394 SPATA45Q537H7 98 aa2.53□□□□□ -2
USP54-206ENST00000433394 SOSTDC1Q6X4U4 206 aa2.53□□□□□ -2
USP54-206ENST00000433394 SPENQ96T58 3664 aaKnown RBP2.53□□□□□ -2
USP54-206ENST00000433394 UNC79Q9P2D8 2635 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 SNRPGP15A8MWD9 76 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 IGKCP01834 107 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 CBLN1P23435 193 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 CAV3P56539 151 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 SPRNQ5BIV9 151 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 KIAA2026Q5HYC2 2103 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 C5orf38Q86SI9 138 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 SBSPONQ8IVN8 264 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 CHCHD1Q96BP2 118 aaKnown RBP2.52□□□□□ -2.01
USP54-206ENST00000433394 DSCR8Q96T75 97 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 DPH3P1Q9H4G8 78 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 DYNLRB1Q9NP97 96 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 KAAG1Q9UBP8 84 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 DCHS2Q6V1P9 2916 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 MAP1AP78559 2803 aaPredicted RBP2.52□□□□□ -2.01
USP54-206ENST00000433394 GCN1Q92616 2671 aaKnown RBP2.52□□□□□ -2.01
USP54-206ENST00000433394 WNK2Q9Y3S1 2297 aa2.52□□□□□ -2.01
USP54-206ENST00000433394 LRBAP50851 2863 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 HRNRQ86YZ3 2850 aaPredicted RBP2.51□□□□□ -2.01
USP54-206ENST00000433394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.51□□□□□ -2.01
USP54-206ENST00000433394 IGHV1-24A0A0C4DH33 117 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 A0A1W2PPM0 123 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 TMEM30CPA0ZSE6 113 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 A6NIN4 97 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 DEFB108AA8MXU0 73 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 DEFA4P12838 97 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 C3orf56Q8N813 242 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 OR8B3Q8NGG8 313 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 CLEC2BQ92478 149 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 ARHGAP5-AS1Q96IT6 56 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 C20orf78Q9BR46 151 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 MALRD1Q5VYJ5 2156 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 CRYBG3Q68DQ2 2970 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 RELNP78509 3460 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 DOPEY2Q9Y3R5 2298 aa2.51□□□□□ -2.01
USP54-206ENST00000433394 CCDC168Q8NDH2 2452 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 NAV3Q8IVL0 2385 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 APCP25054 2843 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 A0A087WWC5 75 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 TRBV7-7A0A0K0K1E9 115 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 H3BSH0 61 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 ZNF737O75373 536 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 SIX6O95475 246 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 COX6B1P14854 86 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 EFNA4P52798 201 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 CCL8P80075 99 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 ZNF345Q14585 488 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 ELOBQ15370 118 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 TPRXLQ17RH7 258 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 PIGYQ3MUY2 71 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 ASB16-AS1Q495Z4 193 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 BVES-AS1Q5T3Y7 98 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 C6orf201Q7Z4U5 140 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 LINC00467Q9BRT7 94 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 NHP2Q9NX24 153 aaKnown RBP2.5□□□□□ -2.01
USP54-206ENST00000433394 LY96Q9Y6Y9 160 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 MYO9AB2RTY4 2548 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 ITPR2Q14571 2701 aa2.5□□□□□ -2.01
USP54-206ENST00000433394 UTP20O75691 2785 aaKnown RBP2.49□□□□□ -2.01
USP54-206ENST00000433394 TENM4Q6N022 2769 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 CELSR2Q9HCU4 2923 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 TRGV2A0A075B6R0 118 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 TRBV6-7A0A0A0MS04 114 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 C7orf77A4D0Y5 90 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 RPL7L1Q6DKI1 246 aaKnown RBP2.49□□□□□ -2.01
USP54-206ENST00000433394 COA5Q86WW8 74 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 MYOZ3Q8TDC0 251 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 SMIM7Q9BQ49 75 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 FLNBO75369 2602 aaKnown RBP2.49□□□□□ -2.01
USP54-206ENST00000433394 POLQO75417 2590 aa2.49□□□□□ -2.01
USP54-206ENST00000433394 hADV29S1A0JD25 119 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 C17orf112F2Z3M2 114 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 SYS1-DBNDD2H3BUS1 97 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 H3BUT2 72 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 M0R1W7 72 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 PPYP01298 95 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 ETDBQ3ZM63 59 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 SPANXN1Q5VSR9 72 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 PATE2Q6UY27 113 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 Q8N2B8 174 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 TRGV9Q99603 122 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 CCL19Q99731 98 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 TLN2Q9Y4G6 2542 aa2.48□□□□□ -2.01
USP54-206ENST00000433394 CSPG4Q6UVK1 2322 aa2.47□□□□□ -2.01
USP54-206ENST00000433394 ASH1LQ9NR48 2969 aaKnown RBP2.47□□□□□ -2.01
USP54-206ENST00000433394 HECTD1Q9ULT8 2610 aa2.47□□□□□ -2.01
USP54-206ENST00000433394 TRAV2A0A0B4J234 112 aa2.47□□□□□ -2.01
USP54-206ENST00000433394 TRAV1-1A0A0B4J248 108 aa2.47□□□□□ -2.01
USP54-206ENST00000433394 LOC107984156A0A0G2JMH3 177 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms