RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 ODF3L2Q3SX64 289 aa7.21□□□□□ -1.26
CCDC171-202ENST00000432954 KNL1Q8NG31 2342 aa7.2□□□□□ -1.26
CCDC171-202ENST00000432954 IGHV3-35A0A0C4DH35 117 aa7.18□□□□□ -1.26
CCDC171-202ENST00000432954 CR1P17927 2039 aa7.18□□□□□ -1.26
CCDC171-202ENST00000432954 TRIOBPQ9H2D6 2365 aa7.17□□□□□ -1.26
CCDC171-202ENST00000432954 IGHV3OR16-13A0A075B7E8 117 aa7.17□□□□□ -1.26
CCDC171-202ENST00000432954 PLA2G2AP14555 144 aa7.17□□□□□ -1.26
CCDC171-202ENST00000432954 XAGE1AQ9HD64 81 aa7.17□□□□□ -1.26
CCDC171-202ENST00000432954 C11orf71Q6IPW1 123 aa7.16□□□□□ -1.26
CCDC171-202ENST00000432954 SPAG11AQ6PDA7 123 aa7.16□□□□□ -1.26
CCDC171-202ENST00000432954 IGHV4-30-2A0A087WSY4 118 aa7.16□□□□□ -1.26
CCDC171-202ENST00000432954 IGLV1-44P01699 117 aa7.16□□□□□ -1.26
CCDC171-202ENST00000432954 IGHV4-30-4P0DP06 118 aa7.16□□□□□ -1.26
CCDC171-202ENST00000432954 KLK9Q2XQG4 91 aa7.16□□□□□ -1.26
CCDC171-202ENST00000432954 LINC00959A0A1B0GUT2 108 aa7.15□□□□□ -1.26
CCDC171-202ENST00000432954 H0Y9P7 68 aa7.15□□□□□ -1.26
CCDC171-202ENST00000432954 TFF2Q03403 129 aa7.15□□□□□ -1.26
CCDC171-202ENST00000432954 Q6ZQY7 126 aa7.15□□□□□ -1.26
CCDC171-202ENST00000432954 ZFP36P26651 326 aaKnown RBP7.15□□□□□ -1.27
CCDC171-202ENST00000432954 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.15□□□□□ -1.27
CCDC171-202ENST00000432954 C9orf163Q8N9P6 203 aa7.15□□□□□ -1.27
CCDC171-202ENST00000432954 NPBQ8NG41 125 aa7.15□□□□□ -1.27
CCDC171-202ENST00000432954 DEFB108BQ8NET1 73 aa7.14□□□□□ -1.27
CCDC171-202ENST00000432954 TRGV4A0A0C4DH28 118 aa7.13□□□□□ -1.27
CCDC171-202ENST00000432954 SPINK14Q6IE38 97 aa7.13□□□□□ -1.27
CCDC171-202ENST00000432954 MED13LQ71F56 2210 aa7.13□□□□□ -1.27
CCDC171-202ENST00000432954 LY6G6EA0A0G2JKS1 128 aa7.13□□□□□ -1.27
CCDC171-202ENST00000432954 IGHV1-2P23083 117 aa7.13□□□□□ -1.27
CCDC171-202ENST00000432954 DSCR9P59020 149 aa7.12□□□□□ -1.27
CCDC171-202ENST00000432954 IGLV7-46A0A075B6I9 117 aa7.12□□□□□ -1.27
CCDC171-202ENST00000432954 DEFB112Q30KQ8 113 aa7.12□□□□□ -1.27
CCDC171-202ENST00000432954 REV3LO60673 3130 aa7.11□□□□□ -1.27
CCDC171-202ENST00000432954 IGHV3-74A0A0B4J1X5 117 aa7.1□□□□□ -1.27
CCDC171-202ENST00000432954 KPRPQ5T749 579 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-202ENST00000432954 DOPEY2Q9Y3R5 2298 aa7.1□□□□□ -1.27
CCDC171-202ENST00000432954 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
CCDC171-202ENST00000432954 CNEP1R1Q8N9A8 125 aa7.1□□□□□ -1.27
CCDC171-202ENST00000432954 KLK12Q9UKR0 248 aa7.1□□□□□ -1.27
CCDC171-202ENST00000432954 IGHV1-46P01743 117 aa7.09□□□□□ -1.27
CCDC171-202ENST00000432954 Q8N9W7 124 aa7.09□□□□□ -1.27
CCDC171-202ENST00000432954 UNC80Q8N2C7 3258 aa7.09□□□□□ -1.27
CCDC171-202ENST00000432954 KRTAP16-1A8MUX0 517 aa7.09□□□□□ -1.27
CCDC171-202ENST00000432954 TOMM7Q9P0U1 55 aa7.09□□□□□ -1.27
CCDC171-202ENST00000432954 FAM215AQ9Y5M1 114 aa7.09□□□□□ -1.27
CCDC171-202ENST00000432954 INAFM1C9JVW0 142 aa7.08□□□□□ -1.28
CCDC171-202ENST00000432954 TECTAO75443 2155 aa7.08□□□□□ -1.28
CCDC171-202ENST00000432954 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
CCDC171-202ENST00000432954 Q8NDZ9 215 aa7.08□□□□□ -1.28
CCDC171-202ENST00000432954 LAMA2P24043 3122 aaKnown RBP7.07□□□□□ -1.28
CCDC171-202ENST00000432954 SDK1Q7Z5N4 2213 aa7.07□□□□□ -1.28
CCDC171-202ENST00000432954 SPATA8Q6RVD6 105 aa7.07□□□□□ -1.28
CCDC171-202ENST00000432954 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
CCDC171-202ENST00000432954 CACNA1EQ15878 2313 aa7.07□□□□□ -1.28
CCDC171-202ENST00000432954 VPS13AQ96RL7 3174 aa7.06□□□□□ -1.28
CCDC171-202ENST00000432954 DEFB1P60022 68 aa7.06□□□□□ -1.28
CCDC171-202ENST00000432954 P0C880 135 aa7.06□□□□□ -1.28
CCDC171-202ENST00000432954 PROK1P58294 105 aa7.06□□□□□ -1.28
CCDC171-202ENST00000432954 CFAP54Q96N23 3096 aa7.06□□□□□ -1.28
CCDC171-202ENST00000432954 TMEM105Q8N8V8 129 aa7.05□□□□□ -1.28
CCDC171-202ENST00000432954 CDK2AP2O75956 126 aa7.03□□□□□ -1.28
CCDC171-202ENST00000432954 COX17Q14061 63 aa7.03□□□□□ -1.28
CCDC171-202ENST00000432954 DPM3Q9P2X0 92 aa7.03□□□□□ -1.28
CCDC171-202ENST00000432954 DNAJC9-AS1A6NH13 148 aa7.03□□□□□ -1.28
CCDC171-202ENST00000432954 DSCR10P59022 87 aa7.03□□□□□ -1.28
CCDC171-202ENST00000432954 KAAG1Q9UBP8 84 aa7.03□□□□□ -1.28
CCDC171-202ENST00000432954 IGLV1-40P01703 118 aa7.02□□□□□ -1.29
CCDC171-202ENST00000432954 NBEAQ8NFP9 2946 aa7.02□□□□□ -1.29
CCDC171-202ENST00000432954 PLA2G2CQ5R387 149 aa7.02□□□□□ -1.29
CCDC171-202ENST00000432954 Q6ZSN1 163 aa7.02□□□□□ -1.29
CCDC171-202ENST00000432954 IGLV1-50A0A075B6I6 118 aa7.01□□□□□ -1.29
CCDC171-202ENST00000432954 IGKV2D-24A0A075B6R9 120 aa7.01□□□□□ -1.29
CCDC171-202ENST00000432954 ODF3BA8MYP8 253 aa7.01□□□□□ -1.29
CCDC171-202ENST00000432954 IGKV3-20P01619 116 aa7.01□□□□□ -1.29
CCDC171-202ENST00000432954 DEFB119Q8N690 84 aa7.01□□□□□ -1.29
CCDC171-202ENST00000432954 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
CCDC171-202ENST00000432954 SEC61BP60468 96 aaKnown RBP7.01□□□□□ -1.29
CCDC171-202ENST00000432954 DEFB133Q30KQ1 61 aa7.01□□□□□ -1.29
CCDC171-202ENST00000432954 U3KQA8 63 aa7.01□□□□□ -1.29
CCDC171-202ENST00000432954 C5orf42Q9H799 3197 aa7□□□□□ -1.29
CCDC171-202ENST00000432954 IGHV3-11P01762 117 aa7□□□□□ -1.29
CCDC171-202ENST00000432954 DNAH14Q0VDD8 3507 aa6.99□□□□□ -1.29
CCDC171-202ENST00000432954 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
CCDC171-202ENST00000432954 LAMA3Q16787 3333 aa6.99□□□□□ -1.29
CCDC171-202ENST00000432954 K7EQZ3 153 aa6.99□□□□□ -1.29
CCDC171-202ENST00000432954 KRTAP25-1Q3LHN0 102 aa6.99□□□□□ -1.29
CCDC171-202ENST00000432954 CDH23Q9H251 3354 aa6.98□□□□□ -1.29
CCDC171-202ENST00000432954 MINOS1Q5TGZ0 78 aa6.98□□□□□ -1.29
CCDC171-202ENST00000432954 A8MTW9 85 aa6.98□□□□□ -1.29
CCDC171-202ENST00000432954 Q8IZM0 81 aa6.98□□□□□ -1.29
CCDC171-202ENST00000432954 IGHV4-61A0A0C4DH41 118 aa6.97□□□□□ -1.29
CCDC171-202ENST00000432954 PRR34Q9NV39 138 aa6.96□□□□□ -1.29
CCDC171-202ENST00000432954 ASXL3Q9C0F0 2248 aa6.95□□□□□ -1.3
CCDC171-202ENST00000432954 LCE2BO14633 110 aa6.95□□□□□ -1.3
CCDC171-202ENST00000432954 LYPD2Q6UXB3 125 aa6.95□□□□□ -1.3
CCDC171-202ENST00000432954 ZNF861PO60384 105 aa6.95□□□□□ -1.3
CCDC171-202ENST00000432954 IGLV5-48A0A075B6I7 105 aa6.94□□□□□ -1.3
CCDC171-202ENST00000432954 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
CCDC171-202ENST00000432954 LINC00483Q53H64 154 aa6.94□□□□□ -1.3
CCDC171-202ENST00000432954 ICE1Q9Y2F5 2266 aa6.94□□□□□ -1.3
CCDC171-202ENST00000432954 IGLV5-37A0A075B6J1 123 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms