RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
CHFR-203ENST00000432561 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
CHFR-203ENST00000432561 HTN3P15516 51 aa11.47□□□□□ -0.57
CHFR-203ENST00000432561 CKS1BP61024 79 aa11.47□□□□□ -0.57
CHFR-203ENST00000432561 Q9HAA7 133 aa11.47□□□□□ -0.57
CHFR-203ENST00000432561 TRAV26-1A0A087WT03 109 aa11.46□□□□□ -0.57
CHFR-203ENST00000432561 SS18Q15532 418 aa11.46□□□□□ -0.58
CHFR-203ENST00000432561 A0A1B0GUV1 79 aa11.45□□□□□ -0.58
CHFR-203ENST00000432561 DAD1P61803 113 aa11.45□□□□□ -0.58
CHFR-203ENST00000432561 SMIM11BQ8TCY0 68 aa11.44□□□□□ -0.58
CHFR-203ENST00000432561 F8P00451 2351 aa11.44□□□□□ -0.58
CHFR-203ENST00000432561 TRAV13-2A0A0B4J235 113 aa11.44□□□□□ -0.58
CHFR-203ENST00000432561 LYRM9A8MSI8 78 aa11.44□□□□□ -0.58
CHFR-203ENST00000432561 IBA57-AS1B1ANH7 110 aa11.44□□□□□ -0.58
CHFR-203ENST00000432561 TTC32Q5I0X7 151 aa11.44□□□□□ -0.58
CHFR-203ENST00000432561 ANGP03950 147 aaKnown RBP11.43□□□□□ -0.58
CHFR-203ENST00000432561 C15orf53Q8NAA6 179 aa11.42□□□□□ -0.58
CHFR-203ENST00000432561 CITED1Q99966 193 aa11.42□□□□□ -0.58
CHFR-203ENST00000432561 A0A1B0GV72 72 aa11.42□□□□□ -0.58
CHFR-203ENST00000432561 SNCGO76070 127 aa11.42□□□□□ -0.58
CHFR-203ENST00000432561 Q8NAQ8 132 aa11.42□□□□□ -0.58
CHFR-203ENST00000432561 OR13C6PQ8NH95 151 aa11.42□□□□□ -0.58
CHFR-203ENST00000432561 FLNBO75369 2602 aaKnown RBP11.42□□□□□ -0.58
CHFR-203ENST00000432561 A0A087WYN8 130 aa11.41□□□□□ -0.58
CHFR-203ENST00000432561 BAALC-AS2P0C853 105 aa11.41□□□□□ -0.58
CHFR-203ENST00000432561 RPL28P46779 137 aaKnown RBP11.41□□□□□ -0.58
CHFR-203ENST00000432561 APOC4P55056 127 aa11.41□□□□□ -0.58
CHFR-203ENST00000432561 PRR3P79522 188 aaKnown RBP11.41□□□□□ -0.58
CHFR-203ENST00000432561 C22orf24Q9Y442 160 aa11.41□□□□□ -0.58
CHFR-203ENST00000432561 ATP5G1P05496 136 aa11.41□□□□□ -0.58
CHFR-203ENST00000432561 ANK2Q01484 3957 aa11.41□□□□□ -0.58
CHFR-203ENST00000432561 C9orf116Q5BN46 136 aaPredicted RBP11.4□□□□□ -0.58
CHFR-203ENST00000432561 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
CHFR-203ENST00000432561 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
CHFR-203ENST00000432561 TRACP01848 142 aa11.39□□□□□ -0.59
CHFR-203ENST00000432561 REG3AQ06141 175 aa11.39□□□□□ -0.59
CHFR-203ENST00000432561 IGHV4-30-4P0DP06 118 aa11.39□□□□□ -0.59
CHFR-203ENST00000432561 Q8IZM0 81 aa11.39□□□□□ -0.59
CHFR-203ENST00000432561 LINC00526Q96FQ7 95 aa11.39□□□□□ -0.59
CHFR-203ENST00000432561 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
CHFR-203ENST00000432561 PPDPFQ9H3Y8 114 aa11.38□□□□□ -0.59
CHFR-203ENST00000432561 TENM3Q9P273 2699 aa11.37□□□□□ -0.59
CHFR-203ENST00000432561 GAGE2BQ13066 116 aa11.37□□□□□ -0.59
CHFR-203ENST00000432561 KIAA0087Q14695 138 aa11.37□□□□□ -0.59
CHFR-203ENST00000432561 GAGE2EQ4V326 116 aa11.37□□□□□ -0.59
CHFR-203ENST00000432561 GAGE2DQ9UEU5 116 aa11.37□□□□□ -0.59
CHFR-203ENST00000432561 C9orf129Q5T035 196 aaKnown RBP11.36□□□□□ -0.59
CHFR-203ENST00000432561 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
CHFR-203ENST00000432561 MALP21145 153 aa11.36□□□□□ -0.59
CHFR-203ENST00000432561 SLPIP03973 132 aa11.34□□□□□ -0.59
CHFR-203ENST00000432561 MIFP14174 115 aa11.34□□□□□ -0.59
CHFR-203ENST00000432561 C6orf223Q8N319 242 aa11.34□□□□□ -0.59
CHFR-203ENST00000432561 LECT2O14960 151 aa11.34□□□□□ -0.59
CHFR-203ENST00000432561 SPART-AS1P0CW21 52 aa11.34□□□□□ -0.59
CHFR-203ENST00000432561 OXLD1Q5BKU9 147 aa11.34□□□□□ -0.59
CHFR-203ENST00000432561 RETNQ9HD89 108 aa11.34□□□□□ -0.59
CHFR-203ENST00000432561 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
CHFR-203ENST00000432561 ANAPC13Q9BS18 74 aa11.33□□□□□ -0.6
CHFR-203ENST00000432561 DNAL4O96015 105 aa11.32□□□□□ -0.6
CHFR-203ENST00000432561 KLK12Q9UKR0 248 aa11.32□□□□□ -0.6
CHFR-203ENST00000432561 FBN1P35555 2871 aaKnown RBP11.32□□□□□ -0.6
CHFR-203ENST00000432561 C10orf25Q5T742 122 aa11.32□□□□□ -0.6
CHFR-203ENST00000432561 Q8NDZ9 215 aa11.32□□□□□ -0.6
CHFR-203ENST00000432561 SMCR5Q8TEV8 140 aa11.32□□□□□ -0.6
CHFR-203ENST00000432561 FAM240AA0A1B0GVK7 77 aa11.31□□□□□ -0.6
CHFR-203ENST00000432561 MRPL23Q16540 153 aaKnown RBP11.31□□□□□ -0.6
CHFR-203ENST00000432561 MAST4O15021 2626 aa11.31□□□□□ -0.6
CHFR-203ENST00000432561 NOTCH1P46531 2555 aa11.3□□□□□ -0.6
CHFR-203ENST00000432561 WFDC9Q8NEX5 89 aa11.3□□□□□ -0.6
CHFR-203ENST00000432561 NHLRC4P0CG21 123 aaPredicted RBP11.29□□□□□ -0.6
CHFR-203ENST00000432561 NANOS2P60321 138 aaKnown RBP11.29□□□□□ -0.6
CHFR-203ENST00000432561 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
CHFR-203ENST00000432561 NCR3O14931 201 aa11.28□□□□□ -0.6
CHFR-203ENST00000432561 GAGE2AQ6NT46 116 aa11.28□□□□□ -0.6
CHFR-203ENST00000432561 NDUFV3P56181 108 aaKnown RBP11.28□□□□□ -0.6
CHFR-203ENST00000432561 LELP1Q5T871 98 aa11.27□□□□□ -0.6
CHFR-203ENST00000432561 C14orf132Q9NPU4 83 aa11.27□□□□□ -0.6
CHFR-203ENST00000432561 H0YGX0 51 aa11.27□□□□□ -0.61
CHFR-203ENST00000432561 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
CHFR-203ENST00000432561 SPAG11BQ08648 103 aa11.26□□□□□ -0.61
CHFR-203ENST00000432561 KRTAP10-11P60412 298 aa11.25□□□□□ -0.61
CHFR-203ENST00000432561 ENHOQ6UWT2 76 aa11.25□□□□□ -0.61
CHFR-203ENST00000432561 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
CHFR-203ENST00000432561 CMYA5Q8N3K9 4069 aa11.24□□□□□ -0.61
CHFR-203ENST00000432561 CYSRT1A8MQ03 144 aa11.23□□□□□ -0.61
CHFR-203ENST00000432561 CXCL5P42830 114 aa11.23□□□□□ -0.61
CHFR-203ENST00000432561 Q6Q795 121 aa11.22□□□□□ -0.61
CHFR-203ENST00000432561 WFDC10BQ8IUB3 73 aa11.22□□□□□ -0.61
CHFR-203ENST00000432561 COX17Q14061 63 aa11.22□□□□□ -0.61
CHFR-203ENST00000432561 INAFM2P0DMQ5 153 aa11.22□□□□□ -0.61
CHFR-203ENST00000432561 PRR34Q9NV39 138 aa11.22□□□□□ -0.61
CHFR-203ENST00000432561 WIPF1O43516 503 aa11.21□□□□□ -0.61
CHFR-203ENST00000432561 ACYP1P07311 99 aa11.21□□□□□ -0.61
CHFR-203ENST00000432561 Q6ZTC4 211 aa11.21□□□□□ -0.61
CHFR-203ENST00000432561 C6orf99Q4VX62 202 aa11.2□□□□□ -0.62
CHFR-203ENST00000432561 KLK5Q9Y337 293 aaPredicted RBP11.2□□□□□ -0.62
CHFR-203ENST00000432561 KPRPQ5T749 579 aaPredicted RBP11.19□□□□□ -0.62
CHFR-203ENST00000432561 TMEM126AQ9H061 195 aa11.19□□□□□ -0.62
CHFR-203ENST00000432561 NDUFC2O95298 119 aa11.19□□□□□ -0.62
CHFR-203ENST00000432561 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms