RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 G0S2P27469 103 aa5.77□□□□□ -1.49
RFX3-AS1-202ENST00000427722 FABP9Q0Z7S8 132 aa5.77□□□□□ -1.49
RFX3-AS1-202ENST00000427722 COX19Q49B96 90 aa5.77□□□□□ -1.49
RFX3-AS1-202ENST00000427722 TOMM6Q96B49 74 aa5.77□□□□□ -1.49
RFX3-AS1-202ENST00000427722 TIMM17AQ99595 171 aa5.77□□□□□ -1.49
RFX3-AS1-202ENST00000427722 ALKBH7Q9BT30 221 aaPredicted RBP5.77□□□□□ -1.49
RFX3-AS1-202ENST00000427722 MRPL35Q9NZE8 188 aaKnown RBP5.77□□□□□ -1.49
RFX3-AS1-202ENST00000427722 C6orf48Q9UBA6 75 aa5.77□□□□□ -1.49
RFX3-AS1-202ENST00000427722 F8WDY8 70 aa5.76□□□□□ -1.49
RFX3-AS1-202ENST00000427722 ATP6V1G1O75348 118 aa5.76□□□□□ -1.49
RFX3-AS1-202ENST00000427722 OXTP01178 125 aa5.76□□□□□ -1.49
RFX3-AS1-202ENST00000427722 PAPPA-AS1Q5QFB9 102 aa5.76□□□□□ -1.49
RFX3-AS1-202ENST00000427722 UNQ6190/PRO20217Q6UXQ8 127 aa5.76□□□□□ -1.49
RFX3-AS1-202ENST00000427722 FA2HQ7L5A8 372 aa5.76□□□□□ -1.49
RFX3-AS1-202ENST00000427722 SCGB3A1Q96QR1 104 aa5.76□□□□□ -1.49
RFX3-AS1-202ENST00000427722 SMCO4Q9NRQ5 59 aa5.76□□□□□ -1.49
RFX3-AS1-202ENST00000427722 A0A1W2PNN7 141 aa5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 PRSS2P07478 247 aa5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 KIAA0087Q14695 138 aa5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 RNF151Q2KHN1 245 aa5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 C9orf116Q5BN46 136 aaPredicted RBP5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 C2orf82Q6UX34 121 aa5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 PACRGQ96M98 296 aaPredicted RBP5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 GEMIN7Q9H840 131 aaKnown RBP5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 TOMM7Q9P0U1 55 aa5.75□□□□□ -1.49
RFX3-AS1-202ENST00000427722 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 S100A1P23297 94 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 HERVK_113P63121 156 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 SEC11AP67812 179 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 GAGE2EQ4V326 116 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 ERASQ7Z444 233 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 LINC01561Q8N1V8 128 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 LINC00469Q8N7U9 141 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 YPEL4Q96NS1 127 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 GAGE2DQ9UEU5 116 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 CDKN2A-AS1Q9UH64 79 aa5.74□□□□□ -1.49
RFX3-AS1-202ENST00000427722 TLX1NBP0CAT3 122 aa5.73□□□□□ -1.49
RFX3-AS1-202ENST00000427722 Q6ZRP5 223 aa5.73□□□□□ -1.49
RFX3-AS1-202ENST00000427722 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
RFX3-AS1-202ENST00000427722 TRAPPC1Q9Y5R8 145 aa5.73□□□□□ -1.49
RFX3-AS1-202ENST00000427722 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
RFX3-AS1-202ENST00000427722 TRBV30A0A0K0K1B3 111 aa5.72□□□□□ -1.49
RFX3-AS1-202ENST00000427722 FAM168BA1KXE4 195 aa5.72□□□□□ -1.49
RFX3-AS1-202ENST00000427722 CKS1BP61024 79 aa5.72□□□□□ -1.49
RFX3-AS1-202ENST00000427722 PHF5AQ7RTV0 110 aaKnown RBP5.72□□□□□ -1.49
RFX3-AS1-202ENST00000427722 FAM19A3Q7Z5A8 133 aa5.72□□□□□ -1.49
RFX3-AS1-202ENST00000427722 CBLN2Q8IUK8 224 aa5.72□□□□□ -1.49
RFX3-AS1-202ENST00000427722 CST9LQ9H4G1 147 aa5.72□□□□□ -1.49
RFX3-AS1-202ENST00000427722 LINC01549A6NIU2 74 aa5.71□□□□□ -1.5
RFX3-AS1-202ENST00000427722 SCO1O75880 301 aa5.71□□□□□ -1.5
RFX3-AS1-202ENST00000427722 PMVKQ15126 192 aa5.71□□□□□ -1.5
RFX3-AS1-202ENST00000427722 PMCHL1Q16048 86 aa5.71□□□□□ -1.5
RFX3-AS1-202ENST00000427722 C6orf226Q5I0X4 101 aa5.71□□□□□ -1.5
RFX3-AS1-202ENST00000427722 Q8IZM0 81 aa5.71□□□□□ -1.5
RFX3-AS1-202ENST00000427722 C18orf32Q8TCD1 76 aa5.71□□□□□ -1.5
RFX3-AS1-202ENST00000427722 TINCRA0A1B0GVN0 87 aa5.7□□□□□ -1.5
RFX3-AS1-202ENST00000427722 SMIM1B2RUZ4 78 aa5.7□□□□□ -1.5
RFX3-AS1-202ENST00000427722 NDUFC2-KCTD14E9PQ53 114 aa5.7□□□□□ -1.5
RFX3-AS1-202ENST00000427722 NDUFA6P56556 154 aa5.7□□□□□ -1.5
RFX3-AS1-202ENST00000427722 PSORS1C2Q9UIG4 136 aa5.7□□□□□ -1.5
RFX3-AS1-202ENST00000427722 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 FAT3Q8TDW7 4589 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 IGLV5-45A0A087WSX0 123 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 A0A096LNJ9 63 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 M0QXV9 152 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 HBDP02042 147 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 SPINK8P0C7L1 97 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 LINC00614P0C842 121 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 URB1-AS1Q96HZ7 61 aa5.69□□□□□ -1.5
RFX3-AS1-202ENST00000427722 COLCA2A8K830 154 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 F8VRH5 84 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 CXCL5P42830 114 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 PDZD11Q5EBL8 140 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 C1orf137Q5JT78 98 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 C9orf129Q5T035 196 aaKnown RBP5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 SPINK6Q6UWN8 80 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 KRTAP7-1Q8IUC3 87 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 COX7B2Q8TF08 81 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 XAGE1AQ9HD64 81 aa5.68□□□□□ -1.5
RFX3-AS1-202ENST00000427722 H3BRM9 83 aa5.67□□□□□ -1.5
RFX3-AS1-202ENST00000427722 IGLC3P0DOY3 106 aa5.67□□□□□ -1.5
RFX3-AS1-202ENST00000427722 RAB5BP61020 215 aa5.67□□□□□ -1.5
RFX3-AS1-202ENST00000427722 UBE2BP63146 152 aa5.67□□□□□ -1.5
RFX3-AS1-202ENST00000427722 REG3GQ6UW15 175 aa5.67□□□□□ -1.5
RFX3-AS1-202ENST00000427722 KRTAP11-1Q8IUC1 163 aa5.67□□□□□ -1.5
RFX3-AS1-202ENST00000427722 ATP5LO75964 103 aa5.66□□□□□ -1.5
RFX3-AS1-202ENST00000427722 SERTAD4-AS1Q5TG53 156 aa5.66□□□□□ -1.5
RFX3-AS1-202ENST00000427722 ZNF22P17026 224 aaPredicted RBP5.65□□□□□ -1.5
RFX3-AS1-202ENST00000427722 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
RFX3-AS1-202ENST00000427722 BAGE3Q86Y29 109 aa5.65□□□□□ -1.5
RFX3-AS1-202ENST00000427722 LINC01600Q96MT4 127 aa5.65□□□□□ -1.5
RFX3-AS1-202ENST00000427722 C11orf86A6NJI1 115 aa5.64□□□□□ -1.51
RFX3-AS1-202ENST00000427722 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
RFX3-AS1-202ENST00000427722 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
RFX3-AS1-202ENST00000427722 TMEM170BQ5T4T1 132 aa5.63□□□□□ -1.51
RFX3-AS1-202ENST00000427722 CHCHD1Q96BP2 118 aaKnown RBP5.63□□□□□ -1.51
RFX3-AS1-202ENST00000427722 HSBP1O75506 76 aa5.62□□□□□ -1.51
RFX3-AS1-202ENST00000427722 TRGC2P03986 189 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms