RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 DLEU1O43261 78 aa5.52□□□□□ -1.53
SMARCAL1-206ENST00000427645 SPINK8P0C7L1 97 aa5.52□□□□□ -1.53
SMARCAL1-206ENST00000427645 COX8AP10176 69 aa5.52□□□□□ -1.53
SMARCAL1-206ENST00000427645 LGALS3P17931 250 aaKnown RBP5.52□□□□□ -1.53
SMARCAL1-206ENST00000427645 NMUP48645 174 aa5.52□□□□□ -1.53
SMARCAL1-206ENST00000427645 FOXI1Q12951 378 aa5.52□□□□□ -1.53
SMARCAL1-206ENST00000427645 SFTA2Q6UW10 78 aa5.52□□□□□ -1.53
SMARCAL1-206ENST00000427645 LINC00336Q6ZUF6 198 aa5.52□□□□□ -1.53
SMARCAL1-206ENST00000427645 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
SMARCAL1-206ENST00000427645 SMIM1B2RUZ4 78 aa5.51□□□□□ -1.53
SMARCAL1-206ENST00000427645 PRSS2P07478 247 aa5.51□□□□□ -1.53
SMARCAL1-206ENST00000427645 C6orf226Q5I0X4 101 aa5.51□□□□□ -1.53
SMARCAL1-206ENST00000427645 KRTAP26-1Q6PEX3 210 aa5.51□□□□□ -1.53
SMARCAL1-206ENST00000427645 SLC25A34Q6PIV7 304 aa5.51□□□□□ -1.53
SMARCAL1-206ENST00000427645 Q9HAA7 133 aa5.51□□□□□ -1.53
SMARCAL1-206ENST00000427645 UQCR10Q9UDW1 63 aa5.51□□□□□ -1.53
SMARCAL1-206ENST00000427645 IGKV2D-26A0A0A0MRZ7 120 aa5.5□□□□□ -1.53
SMARCAL1-206ENST00000427645 MYMXA0A1B0GTQ4 84 aa5.5□□□□□ -1.53
SMARCAL1-206ENST00000427645 BOD1L2Q8IYS8 172 aa5.5□□□□□ -1.53
SMARCAL1-206ENST00000427645 Q8IZM0 81 aa5.5□□□□□ -1.53
SMARCAL1-206ENST00000427645 C14orf144Q96I85 54 aa5.5□□□□□ -1.53
SMARCAL1-206ENST00000427645 MIEN1Q9BRT3 115 aa5.5□□□□□ -1.53
SMARCAL1-206ENST00000427645 LRP1BQ9NZR2 4599 aa5.5□□□□□ -1.53
SMARCAL1-206ENST00000427645 LINC00587B1AMM8 73 aa5.49□□□□□ -1.53
SMARCAL1-206ENST00000427645 F8WDY8 70 aa5.49□□□□□ -1.53
SMARCAL1-206ENST00000427645 CXCL5P42830 114 aa5.49□□□□□ -1.53
SMARCAL1-206ENST00000427645 HERV-K104P63124 156 aa5.49□□□□□ -1.53
SMARCAL1-206ENST00000427645 COX7B2Q8TF08 81 aa5.49□□□□□ -1.53
SMARCAL1-206ENST00000427645 ZNF815PA8K554 130 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 NDUFA1O15239 70 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 PSCAO43653 123 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 CKS1BP61024 79 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 CIRBPQ14011 172 aaKnown RBP5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 XP32Q5T750 250 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 PCP2Q8IVA1 136 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 ORAOV1Q8WV07 137 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 PRO1933Q9H354 126 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 TOMM7Q9P0U1 55 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 NDUFA12Q9UI09 145 aa5.48□□□□□ -1.53
SMARCAL1-206ENST00000427645 APOBP04114 4563 aaKnown RBP5.47□□□□□ -1.53
SMARCAL1-206ENST00000427645 SCGB1D4Q6XE38 83 aa5.47□□□□□ -1.53
SMARCAL1-206ENST00000427645 Q6ZR54 194 aa5.47□□□□□ -1.53
SMARCAL1-206ENST00000427645 MAPKAPK5-AS1Q8N8E1 139 aa5.47□□□□□ -1.53
SMARCAL1-206ENST00000427645 KRTAP1-5Q9BYS1 174 aa5.47□□□□□ -1.53
SMARCAL1-206ENST00000427645 HIGD1BQ9P298 99 aa5.47□□□□□ -1.53
SMARCAL1-206ENST00000427645 KIAA0087Q14695 138 aa5.46□□□□□ -1.54
SMARCAL1-206ENST00000427645 C14orf177Q52M58 125 aa5.46□□□□□ -1.54
SMARCAL1-206ENST00000427645 C6orf223Q8N319 242 aa5.46□□□□□ -1.54
SMARCAL1-206ENST00000427645 C2orf48Q96LS8 159 aa5.46□□□□□ -1.54
SMARCAL1-206ENST00000427645 CDIP1Q9H305 208 aa5.46□□□□□ -1.54
SMARCAL1-206ENST00000427645 GVQW2A0A096LPI5 108 aaPredicted RBP5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 GCSHP23434 173 aa5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 HNRNPA3P51991 378 aaKnown RBP5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 TSPEAR-AS2P59090 65 aa5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 SPAG11BQ08648 103 aa5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 COX17Q14061 63 aa5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 C1orf134Q5TEV5 83 aa5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 NTN5Q8WTR8 489 aaPredicted RBP5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 ZNF625Q96I27 306 aaPredicted RBP5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 TTTY13Q9BZ97 58 aa5.45□□□□□ -1.54
SMARCAL1-206ENST00000427645 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 TMEM238C9JI98 176 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 USP17L23D6RBM5 183 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 TIMM17BO60830 172 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 DDTP30046 118 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 TAL2Q16559 108 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 Q6ZVH6 145 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 C15orf56Q8N910 161 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 CAMK2N2Q96S95 79 aa5.44□□□□□ -1.54
SMARCAL1-206ENST00000427645 TRBV30A0A0K0K1B3 111 aa5.43□□□□□ -1.54
SMARCAL1-206ENST00000427645 SRSF9Q13242 221 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMARCAL1-206ENST00000427645 RNF151Q2KHN1 245 aa5.43□□□□□ -1.54
SMARCAL1-206ENST00000427645 MEIG1Q5JSS6 88 aa5.43□□□□□ -1.54
SMARCAL1-206ENST00000427645 COPS9Q8WXC6 57 aa5.43□□□□□ -1.54
SMARCAL1-206ENST00000427645 SPANXB1Q9NS25 103 aaPredicted RBP5.43□□□□□ -1.54
SMARCAL1-206ENST00000427645 HERC1Q15751 4861 aa5.43□□□□□ -1.54
SMARCAL1-206ENST00000427645 PCP4L1A6NKN8 68 aa5.42□□□□□ -1.54
SMARCAL1-206ENST00000427645 C16orf90A8MZG2 172 aa5.42□□□□□ -1.54
SMARCAL1-206ENST00000427645 SYCNQ0VAF6 134 aa5.42□□□□□ -1.54
SMARCAL1-206ENST00000427645 HIGD2BQ4VC39 106 aa5.42□□□□□ -1.54
SMARCAL1-206ENST00000427645 C2orf82Q6UX34 121 aa5.42□□□□□ -1.54
SMARCAL1-206ENST00000427645 Q6ZRN7 208 aaPredicted RBP5.42□□□□□ -1.54
SMARCAL1-206ENST00000427645 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 IFITM1P13164 125 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 LINC00158P58513 81 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 UNQ6190/PRO20217Q6UXQ8 127 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 C2orf91Q6ZV80 131 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 HIST1H4GQ99525 98 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 SPANXDQ9BXN6 97 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 SPANXCQ9NY87 97 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 ERG28Q9UKR5 140 aa5.41□□□□□ -1.54
SMARCAL1-206ENST00000427645 LRCOL1A6NCL2 159 aa5.4□□□□□ -1.54
SMARCAL1-206ENST00000427645 M0R143 59 aa5.4□□□□□ -1.54
SMARCAL1-206ENST00000427645 PTTG1IPP53801 180 aa5.4□□□□□ -1.54
SMARCAL1-206ENST00000427645 CTAG1AP78358 180 aa5.4□□□□□ -1.54
SMARCAL1-206ENST00000427645 HSD52Q0P140 79 aa5.4□□□□□ -1.54
SMARCAL1-206ENST00000427645 LINC00526Q96FQ7 95 aa5.4□□□□□ -1.54
SMARCAL1-206ENST00000427645 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms