RNA–Protein interactions for RNA: ENST00000427444.1

HFM1-202, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-202ENST00000427444 SMIM21Q3B7S5 101 aa-1.59□□□□□ -2.66
HFM1-202ENST00000427444 Q8N8P6 123 aa-1.59□□□□□ -2.66
HFM1-202ENST00000427444 NDUFA4L2Q9NRX3 87 aa-1.59□□□□□ -2.66
HFM1-202ENST00000427444 KNL1Q8NG31 2342 aa-1.59□□□□□ -2.66
HFM1-202ENST00000427444 KDM5AP29375 1690 aaKnown RBP-1.59□□□□□ -2.66
HFM1-202ENST00000427444 TPPP2P59282 170 aa-1.6□□□□□ -2.67
HFM1-202ENST00000427444 MAFIPQ8WZ33 124 aa-1.6□□□□□ -2.67
HFM1-202ENST00000427444 PDCD10Q9BUL8 212 aa-1.6□□□□□ -2.67
HFM1-202ENST00000427444 CEP152O94986 1710 aa-1.6□□□□□ -2.67
HFM1-202ENST00000427444 DNAH8Q96JB1 4490 aa-1.61□□□□□ -2.67
HFM1-202ENST00000427444 MT1MQ8N339 61 aa-1.61□□□□□ -2.67
HFM1-202ENST00000427444 C9orf62Q8N4C0 152 aa-1.61□□□□□ -2.67
HFM1-202ENST00000427444 MYOM3Q5VTT5 1437 aa-1.61□□□□□ -2.67
HFM1-202ENST00000427444 ADGRG4Q8IZF6 3080 aa-1.61□□□□□ -2.67
HFM1-202ENST00000427444 C12orf73Q69YU5 71 aa-1.62□□□□□ -2.67
HFM1-202ENST00000427444 LINC01558Q9Y6Z2 57 aa-1.62□□□□□ -2.67
HFM1-202ENST00000427444 FREM2Q5SZK8 3169 aa-1.62□□□□□ -2.67
HFM1-202ENST00000427444 IGLC7A0M8Q6 106 aa-1.63□□□□□ -2.67
HFM1-202ENST00000427444 CPSF4LA6NMK7 179 aaKnown RBP-1.63□□□□□ -2.67
HFM1-202ENST00000427444 SYS1-DBNDD2H3BUS1 97 aa-1.63□□□□□ -2.67
HFM1-202ENST00000427444 MT2AP02795 61 aa-1.63□□□□□ -2.67
HFM1-202ENST00000427444 DEFB1P60022 68 aa-1.63□□□□□ -2.67
HFM1-202ENST00000427444 LSM10Q969L4 123 aaKnown RBP-1.63□□□□□ -2.67
HFM1-202ENST00000427444 DYNLRB1Q9NP97 96 aa-1.63□□□□□ -2.67
HFM1-202ENST00000427444 POLA1P09884 1462 aaPredicted RBP-1.63□□□□□ -2.67
HFM1-202ENST00000427444 RIMS1Q86UR5 1692 aaKnown RBP-1.64□□□□□ -2.67
HFM1-202ENST00000427444 CRYBG3Q68DQ2 2970 aa-1.64□□□□□ -2.67
HFM1-202ENST00000427444 COX8AP10176 69 aa-1.64□□□□□ -2.67
HFM1-202ENST00000427444 COPS9Q8WXC6 57 aa-1.64□□□□□ -2.67
HFM1-202ENST00000427444 MGST2Q99735 147 aa-1.64□□□□□ -2.67
HFM1-202ENST00000427444 REV3LO60673 3130 aa-1.64□□□□□ -2.67
HFM1-202ENST00000427444 HMGXB3Q12766 1538 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 TULP4Q9NRJ4 1543 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 CEP290O15078 2479 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 TRBV7-4A0A0J9YYF1 115 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 LINC00959A0A1B0GUT2 108 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 IFNGP01579 166 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 H1FX-AS1Q4G0G2 97 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 C5orf42Q9H799 3197 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 SHANK2Q9UPX8 1470 aa-1.65□□□□□ -2.67
HFM1-202ENST00000427444 TROQ12816 1431 aaPredicted RBP-1.66□□□□□ -2.67
HFM1-202ENST00000427444 TRANK1O15050 2925 aa-1.66□□□□□ -2.67
HFM1-202ENST00000427444 SZT2Q5T011 3432 aa-1.66□□□□□ -2.67
HFM1-202ENST00000427444 CFTRP13569 1480 aa-1.66□□□□□ -2.68
HFM1-202ENST00000427444 GRIN2AQ12879 1464 aa-1.66□□□□□ -2.68
HFM1-202ENST00000427444 TRBV7-3A0A075B6L6 115 aa-1.66□□□□□ -2.68
HFM1-202ENST00000427444 TSLPQ969D9 159 aa-1.66□□□□□ -2.68
HFM1-202ENST00000427444 NAA60Q9H7X0 242 aa-1.66□□□□□ -2.68
HFM1-202ENST00000427444 DMDP11532 3685 aa-1.67□□□□□ -2.68
HFM1-202ENST00000427444 PDE4DIPQ5VU43 2346 aa-1.67□□□□□ -2.68
HFM1-202ENST00000427444 KIAA0556O60303 1618 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 ATMQ13315 3056 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 H3BNG1 76 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 K7EP34 96 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 USMG5Q96IX5 58 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 RERGLQ9H628 205 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 SERP1Q9Y6X1 66 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 ARHGEF12Q9NZN5 1544 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 VCANP13611 3396 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 FRYQ5TBA9 3013 aa-1.68□□□□□ -2.68
HFM1-202ENST00000427444 H0YGG7 62 aa-1.69□□□□□ -2.68
HFM1-202ENST00000427444 HMGN4O00479 90 aa-1.69□□□□□ -2.68
HFM1-202ENST00000427444 ARPC4P59998 168 aa-1.69□□□□□ -2.68
HFM1-202ENST00000427444 ADAMTS12P58397 1594 aa-1.69□□□□□ -2.68
HFM1-202ENST00000427444 FMN2Q9NZ56 1722 aa-1.69□□□□□ -2.68
HFM1-202ENST00000427444 RAPGEF6Q8TEU7 1601 aa-1.69□□□□□ -2.68
HFM1-202ENST00000427444 PTPN23Q9H3S7 1636 aa-1.69□□□□□ -2.68
HFM1-202ENST00000427444 PSME4Q14997 1843 aa-1.7□□□□□ -2.68
HFM1-202ENST00000427444 SFT2D2O95562 160 aa-1.7□□□□□ -2.68
HFM1-202ENST00000427444 SLIT1O75093 1534 aa-1.71□□□□□ -2.68
HFM1-202ENST00000427444 PRUNE2Q8WUY3 3088 aa-1.71□□□□□ -2.68
HFM1-202ENST00000427444 PFDN5Q99471 154 aa-1.71□□□□□ -2.68
HFM1-202ENST00000427444 CRIPTQ9P021 101 aa-1.71□□□□□ -2.68
HFM1-202ENST00000427444 CFAP54Q96N23 3096 aa-1.71□□□□□ -2.68
HFM1-202ENST00000427444 COL4A6Q14031 1691 aa-1.71□□□□□ -2.68
HFM1-202ENST00000427444 PAPPA2Q9BXP8 1791 aa-1.72□□□□□ -2.68
HFM1-202ENST00000427444 BTAF1O14981 1849 aa-1.72□□□□□ -2.68
HFM1-202ENST00000427444 SMR3BP02814 79 aaPredicted RBP-1.72□□□□□ -2.68
HFM1-202ENST00000427444 C10orf113Q5VZT2 155 aa-1.72□□□□□ -2.68
HFM1-202ENST00000427444 TMEM263Q8WUH6 116 aaKnown RBP-1.72□□□□□ -2.68
HFM1-202ENST00000427444 DNAH10Q8IVF4 4471 aa-1.72□□□□□ -2.69
HFM1-202ENST00000427444 SETBP1Q9Y6X0 1596 aa-1.72□□□□□ -2.69
HFM1-202ENST00000427444 LOC285095A0A1B0GVY8 99 aa-1.73□□□□□ -2.69
HFM1-202ENST00000427444 MT1LQ93083 61 aa-1.73□□□□□ -2.69
HFM1-202ENST00000427444 LINC00846Q9NV44 126 aa-1.73□□□□□ -2.69
HFM1-202ENST00000427444 SPTAN1Q13813 2472 aaKnown RBP-1.73□□□□□ -2.69
HFM1-202ENST00000427444 PCNTO95613 3336 aa-1.73□□□□□ -2.69
HFM1-202ENST00000427444 KNDC1Q76NI1 1749 aa-1.74□□□□□ -2.69
HFM1-202ENST00000427444 MUC3AQ02505 3323 aa-1.74□□□□□ -2.69
HFM1-202ENST00000427444 MT1EP04732 61 aa-1.74□□□□□ -2.69
HFM1-202ENST00000427444 MGPP08493 103 aa-1.74□□□□□ -2.69
HFM1-202ENST00000427444 SNRNP25Q9BV90 132 aaKnown RBP-1.74□□□□□ -2.69
HFM1-202ENST00000427444 UBE2D3P61077 147 aa-1.75□□□□□ -2.69
HFM1-202ENST00000427444 UBE2D2P62837 147 aa-1.75□□□□□ -2.69
HFM1-202ENST00000427444 KRTAP19-5Q3LI72 72 aa-1.75□□□□□ -2.69
HFM1-202ENST00000427444 MRPL54Q6P161 138 aaKnown RBP-1.75□□□□□ -2.69
HFM1-202ENST00000427444 KRTAP8-1Q8IUC2 63 aa-1.75□□□□□ -2.69
HFM1-202ENST00000427444 PPP3R2Q96LZ3 170 aa-1.75□□□□□ -2.69
HFM1-202ENST00000427444 SPRR4Q96PI1 79 aa-1.75□□□□□ -2.69
HFM1-202ENST00000427444 MAGI1Q96QZ7 1491 aaPredicted RBP-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms