RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
CHEK1-202ENST00000427383 HYDINQ4G0P3 5121 aa11.31□□□□□ -0.6
CHEK1-202ENST00000427383 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
CHEK1-202ENST00000427383 TAL2Q16559 108 aa11.31□□□□□ -0.6
CHEK1-202ENST00000427383 CFAP161Q6P656 301 aa11.31□□□□□ -0.6
CHEK1-202ENST00000427383 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
CHEK1-202ENST00000427383 SNHG12Q9BXW3 62 aa11.31□□□□□ -0.6
CHEK1-202ENST00000427383 SACSQ9NZJ4 4579 aa11.3□□□□□ -0.6
CHEK1-202ENST00000427383 CKS1BP61024 79 aa11.3□□□□□ -0.6
CHEK1-202ENST00000427383 ADAMTSL4-AS1Q5T5F5 129 aa11.3□□□□□ -0.6
CHEK1-202ENST00000427383 NTN5Q8WTR8 489 aaPredicted RBP11.3□□□□□ -0.6
CHEK1-202ENST00000427383 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
CHEK1-202ENST00000427383 TM2D2Q9BX73 214 aa11.3□□□□□ -0.6
CHEK1-202ENST00000427383 EREGO14944 169 aa11.3□□□□□ -0.6
CHEK1-202ENST00000427383 BVES-AS1Q5T3Y7 98 aa11.3□□□□□ -0.6
CHEK1-202ENST00000427383 Q6ZR54 194 aa11.3□□□□□ -0.6
CHEK1-202ENST00000427383 HINT1P49773 126 aaPredicted RBP11.29□□□□□ -0.6
CHEK1-202ENST00000427383 HIGD2BQ4VC39 106 aa11.29□□□□□ -0.6
CHEK1-202ENST00000427383 Q6ZRN7 208 aaPredicted RBP11.29□□□□□ -0.6
CHEK1-202ENST00000427383 HIST1H4GQ99525 98 aa11.29□□□□□ -0.6
CHEK1-202ENST00000427383 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
CHEK1-202ENST00000427383 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
CHEK1-202ENST00000427383 FRAS1Q86XX4 4008 aa11.28□□□□□ -0.6
CHEK1-202ENST00000427383 USP17L23D6RBM5 183 aa11.28□□□□□ -0.6
CHEK1-202ENST00000427383 M0R143 59 aa11.27□□□□□ -0.6
CHEK1-202ENST00000427383 C10orf25Q5T742 122 aa11.27□□□□□ -0.6
CHEK1-202ENST00000427383 CEND1Q8N111 149 aa11.27□□□□□ -0.6
CHEK1-202ENST00000427383 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
CHEK1-202ENST00000427383 LY6G6CO95867 125 aa11.27□□□□□ -0.61
CHEK1-202ENST00000427383 SRSF9Q13242 221 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHEK1-202ENST00000427383 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.61
CHEK1-202ENST00000427383 UNQ6190/PRO20217Q6UXQ8 127 aa11.27□□□□□ -0.61
CHEK1-202ENST00000427383 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
CHEK1-202ENST00000427383 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
CHEK1-202ENST00000427383 FXYD2P54710 66 aa11.26□□□□□ -0.61
CHEK1-202ENST00000427383 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
CHEK1-202ENST00000427383 Q6ZVH6 145 aa11.26□□□□□ -0.61
CHEK1-202ENST00000427383 ERG28Q9UKR5 140 aa11.26□□□□□ -0.61
CHEK1-202ENST00000427383 DNAH17Q9UFH2 4485 aa11.26□□□□□ -0.61
CHEK1-202ENST00000427383 M0R2N4 97 aa11.25□□□□□ -0.61
CHEK1-202ENST00000427383 GCSHP23434 173 aa11.25□□□□□ -0.61
CHEK1-202ENST00000427383 DAND5Q8N907 189 aa11.25□□□□□ -0.61
CHEK1-202ENST00000427383 WFDC2Q14508 124 aa11.24□□□□□ -0.61
CHEK1-202ENST00000427383 F8WDY8 70 aa11.24□□□□□ -0.61
CHEK1-202ENST00000427383 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
CHEK1-202ENST00000427383 A0A0U1RRA0 63 aa11.23□□□□□ -0.61
CHEK1-202ENST00000427383 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
CHEK1-202ENST00000427383 PTTG1IPP53801 180 aa11.23□□□□□ -0.61
CHEK1-202ENST00000427383 COX17Q14061 63 aa11.23□□□□□ -0.61
CHEK1-202ENST00000427383 BATFQ16520 125 aa11.23□□□□□ -0.61
CHEK1-202ENST00000427383 CAMK2N2Q96S95 79 aa11.23□□□□□ -0.61
CHEK1-202ENST00000427383 LECT2O14960 151 aa11.22□□□□□ -0.61
CHEK1-202ENST00000427383 PSCAO43653 123 aa11.22□□□□□ -0.61
CHEK1-202ENST00000427383 C9orf116Q5BN46 136 aaPredicted RBP11.22□□□□□ -0.61
CHEK1-202ENST00000427383 TRBV30A0A0K0K1B3 111 aa11.21□□□□□ -0.61
CHEK1-202ENST00000427383 PFN2P35080 140 aa11.21□□□□□ -0.61
CHEK1-202ENST00000427383 Q6ZRU5 148 aa11.21□□□□□ -0.61
CHEK1-202ENST00000427383 MUSTN1Q8IVN3 82 aa11.21□□□□□ -0.61
CHEK1-202ENST00000427383 MIR7-3HGQ8N6C7 128 aa11.21□□□□□ -0.61
CHEK1-202ENST00000427383 HECTD4Q9Y4D8 3996 aa11.21□□□□□ -0.62
CHEK1-202ENST00000427383 SLPIP03973 132 aa11.2□□□□□ -0.62
CHEK1-202ENST00000427383 IFITM1P13164 125 aa11.2□□□□□ -0.62
CHEK1-202ENST00000427383 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
CHEK1-202ENST00000427383 LINC00308Q8TCZ7 52 aa11.2□□□□□ -0.62
CHEK1-202ENST00000427383 PPDPFQ9H3Y8 114 aa11.2□□□□□ -0.62
CHEK1-202ENST00000427383 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
CHEK1-202ENST00000427383 LINC00158P58513 81 aa11.2□□□□□ -0.62
CHEK1-202ENST00000427383 NPC2P61916 151 aa11.18□□□□□ -0.62
CHEK1-202ENST00000427383 SYCNQ0VAF6 134 aa11.18□□□□□ -0.62
CHEK1-202ENST00000427383 TMEM238LA0A1B0GVL6 79 aa11.17□□□□□ -0.62
CHEK1-202ENST00000427383 A0A1B0GWB2 263 aa11.17□□□□□ -0.62
CHEK1-202ENST00000427383 A4D1N5 150 aa11.17□□□□□ -0.62
CHEK1-202ENST00000427383 A6NJY4 79 aa11.17□□□□□ -0.62
CHEK1-202ENST00000427383 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
CHEK1-202ENST00000427383 LBHQ53QV2 105 aaPredicted RBP11.17□□□□□ -0.62
CHEK1-202ENST00000427383 FAT2Q9NYQ8 4349 aa11.17□□□□□ -0.62
CHEK1-202ENST00000427383 CARD19Q96LW7 228 aa11.16□□□□□ -0.62
CHEK1-202ENST00000427383 KMT2CQ8NEZ4 4911 aaKnown RBP11.15□□□□□ -0.62
CHEK1-202ENST00000427383 LOC107984156A0A0G2JMH3 177 aa11.15□□□□□ -0.62
CHEK1-202ENST00000427383 A6NDN8 102 aa11.15□□□□□ -0.62
CHEK1-202ENST00000427383 COL5A1-AS1Q5SY13 56 aa11.15□□□□□ -0.62
CHEK1-202ENST00000427383 ARL17AQ8IVW1 177 aa11.15□□□□□ -0.62
CHEK1-202ENST00000427383 NHP2Q9NX24 153 aaKnown RBP11.15□□□□□ -0.62
CHEK1-202ENST00000427383 CNBPP62633 177 aaKnown RBP11.14□□□□□ -0.63
CHEK1-202ENST00000427383 RNF151Q2KHN1 245 aa11.14□□□□□ -0.63
CHEK1-202ENST00000427383 C14orf177Q52M58 125 aa11.14□□□□□ -0.63
CHEK1-202ENST00000427383 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
CHEK1-202ENST00000427383 C1orf134Q5TEV5 83 aa11.14□□□□□ -0.63
CHEK1-202ENST00000427383 SND1-IT1Q9HBX3 110 aa11.14□□□□□ -0.63
CHEK1-202ENST00000427383 DNAH11Q96DT5 4516 aa11.13□□□□□ -0.63
CHEK1-202ENST00000427383 NDUFC2-KCTD14E9PQ53 114 aa11.13□□□□□ -0.63
CHEK1-202ENST00000427383 K7ERJ3 54 aa11.13□□□□□ -0.63
CHEK1-202ENST00000427383 CFC1BP0CG36 223 aa11.13□□□□□ -0.63
CHEK1-202ENST00000427383 CFC1P0CG37 223 aa11.13□□□□□ -0.63
CHEK1-202ENST00000427383 TLX1NBP0CAT3 122 aa11.11□□□□□ -0.63
CHEK1-202ENST00000427383 RYR2Q92736 4967 aa11.11□□□□□ -0.63
CHEK1-202ENST00000427383 A0A087WTM6 91 aa11.11□□□□□ -0.63
CHEK1-202ENST00000427383 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
CHEK1-202ENST00000427383 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
CHEK1-202ENST00000427383 TAX1BP3O14907 124 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms