RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 UBE2L6O14933 153 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 CCL25O15444 150 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 DPM2O94777 84 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 NCR2O95944 276 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 IGKCP01834 107 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 SMIM17P0DL12 118 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 RNASE3P12724 160 aaKnown RBP0.98□□□□□ -2.25
PTPRC-208ENST00000427110 PLNP26678 52 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 G0S2P27469 103 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 PSMB8P28062 276 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 ASIPP42127 132 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 HINT1P49773 126 aaPredicted RBP0.98□□□□□ -2.25
PTPRC-208ENST00000427110 CRYBA4P53673 196 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 POLR2KP53803 58 aaKnown RBP0.98□□□□□ -2.25
PTPRC-208ENST00000427110 LINC00313P59037 77 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 BLCAPP62952 87 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 HERVK_113P63121 156 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 HSD52Q0P140 79 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 TMEM97Q5BJF2 176 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 SPANXN1Q5VSR9 72 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 AMTNQ6UX39 209 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 SMIM15Q7Z3B0 74 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 ATOH7Q8N100 152 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 Q8N2B8 174 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 TMEM86BQ8N661 226 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 Q8TAT8 98 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 DCANP1Q8TF63 244 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 PTH2Q96A98 100 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 TOMM6Q96B49 74 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 CCL19Q99731 98 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 LINC00467Q9BRT7 94 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 SMIM2Q9BVW6 85 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 RHPN1-AS1Q9BWJ2 59 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 DPH3P1Q9H4G8 78 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 UFC1Q9Y3C8 167 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 MXRA5Q9NR99 2828 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 CRYBG3Q68DQ2 2970 aa0.98□□□□□ -2.25
PTPRC-208ENST00000427110 UBR5O95071 2799 aaPredicted RBP0.97□□□□□ -2.25
PTPRC-208ENST00000427110 TEX15Q9BXT5 2789 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 ZNF469Q96JG9 3925 aaPredicted RBP0.97□□□□□ -2.25
PTPRC-208ENST00000427110 USP9YO00507 2555 aaPredicted RBP0.97□□□□□ -2.25
PTPRC-208ENST00000427110 TRBV7-3A0A075B6L6 115 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 TRBV25-1A0A075B6N4 114 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 IGKV2D-26A0A0A0MRZ7 120 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 IGIPA6NJ69 53 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 C11orf86A6NJI1 115 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 H3BVH4 76 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 GNRH2O43555 120 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 LGALS1P09382 135 aaKnown RBP0.97□□□□□ -2.25
PTPRC-208ENST00000427110 CD7P09564 240 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 SMIM13P0DJ93 91 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 COX6B1P14854 86 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 RNASE4P34096 147 aaKnown RBP0.97□□□□□ -2.25
PTPRC-208ENST00000427110 FXYD7P58549 80 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 RHOHQ15669 191 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 BATFQ16520 125 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 C4orf26Q17RF5 130 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 DEFB112Q30KQ8 113 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 FOXI2Q6ZQN5 318 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 GTF2H5Q6ZYL4 71 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 TEX29Q8N6K0 151 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 OR5A1Q8NGJ0 315 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 TMEM141Q96I45 108 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 LINC01600Q96MT4 127 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 AP1S3Q96PC3 154 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 UPK3BQ9BT76 320 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 C16orf95Q9H693 158 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 SPANXB1Q9NS25 103 aaPredicted RBP0.97□□□□□ -2.25
PTPRC-208ENST00000427110 MRPL35Q9NZE8 188 aaKnown RBP0.97□□□□□ -2.25
PTPRC-208ENST00000427110 TP73-AS1Q9UF72 201 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 USP24Q9UPU5 2620 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 WNK1Q9H4A3 2382 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 COL12A1Q99715 3063 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 FBN3Q75N90 2809 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 ZANQ9Y493 2812 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 MYO18BQ8IUG5 2567 aa0.97□□□□□ -2.25
PTPRC-208ENST00000427110 ACACBO00763 2458 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 APCP25054 2843 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 TRAV26-2A0A0B4J265 109 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 TRAV12-3A0A0B4J271 114 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 MYMXA0A1B0GTQ4 84 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 A0A1W2PPM0 123 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 A8MWV9 139 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 OR11H12B2RN74 326 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 F8W1H4 67 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 K7EP34 96 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 K7ERU9 68 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 M0QY20 66 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 LEPROTO15243 131 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 PRB4P10163 310 aaPredicted RBP0.96□□□□□ -2.26
PTPRC-208ENST00000427110 S100A4P26447 101 aaKnown RBP0.96□□□□□ -2.26
PTPRC-208ENST00000427110 UBE2D1P51668 147 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 FXYD2P54710 66 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 DEFB1P60022 68 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 SNRPD3P62318 126 aaKnown RBP0.96□□□□□ -2.26
PTPRC-208ENST00000427110 DEFB113Q30KQ7 82 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 C12orf74Q32Q52 190 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 OCIAD2Q56VL3 154 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 C10orf99Q6UWK7 81 aa0.96□□□□□ -2.26
PTPRC-208ENST00000427110 OR11H2Q8NH07 326 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 1468.8 ms