RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 APOBP04114 4563 aaKnown RBP4.78□□□□□ -1.64
LINC01049-201ENST00000426840 TINCRA0A1B0GVN0 87 aa4.78□□□□□ -1.64
LINC01049-201ENST00000426840 SEC11AP67812 179 aa4.78□□□□□ -1.64
LINC01049-201ENST00000426840 COA6Q5JTJ3 125 aaKnown RBP4.78□□□□□ -1.64
LINC01049-201ENST00000426840 SDIM1Q6ZPB5 146 aa4.78□□□□□ -1.64
LINC01049-201ENST00000426840 IFI27L1Q96BM0 104 aa4.78□□□□□ -1.64
LINC01049-201ENST00000426840 CDKN2A-AS1Q9UH64 79 aa4.78□□□□□ -1.64
LINC01049-201ENST00000426840 IGLV4-69A0A075B6H9 119 aa4.77□□□□□ -1.65
LINC01049-201ENST00000426840 IGLV5-45A0A087WSX0 123 aa4.77□□□□□ -1.65
LINC01049-201ENST00000426840 APOMO95445 188 aa4.77□□□□□ -1.65
LINC01049-201ENST00000426840 XGP55808 180 aa4.77□□□□□ -1.65
LINC01049-201ENST00000426840 NDUFA6P56556 154 aa4.77□□□□□ -1.65
LINC01049-201ENST00000426840 HERVK_113P63121 156 aa4.77□□□□□ -1.65
LINC01049-201ENST00000426840 KIAA0087Q14695 138 aa4.77□□□□□ -1.65
LINC01049-201ENST00000426840 TRAV12-1A0A0B4J245 112 aa4.76□□□□□ -1.65
LINC01049-201ENST00000426840 LEPROTL1O95214 131 aa4.76□□□□□ -1.65
LINC01049-201ENST00000426840 IGLC3P0DOY3 106 aa4.76□□□□□ -1.65
LINC01049-201ENST00000426840 FABP4P15090 132 aa4.76□□□□□ -1.65
LINC01049-201ENST00000426840 Q6ZSA8 131 aa4.76□□□□□ -1.65
LINC01049-201ENST00000426840 OR10D4PQ8NGN7 298 aa4.76□□□□□ -1.65
LINC01049-201ENST00000426840 ORAOV1Q8WV07 137 aa4.76□□□□□ -1.65
LINC01049-201ENST00000426840 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
LINC01049-201ENST00000426840 GEMIN7Q9H840 131 aaKnown RBP4.76□□□□□ -1.65
LINC01049-201ENST00000426840 HERC2O95714 4834 aa4.75□□□□□ -1.65
LINC01049-201ENST00000426840 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.75□□□□□ -1.65
LINC01049-201ENST00000426840 CDK2AP2O75956 126 aa4.75□□□□□ -1.65
LINC01049-201ENST00000426840 SPAG11BQ08648 103 aa4.75□□□□□ -1.65
LINC01049-201ENST00000426840 SYCNQ0VAF6 134 aa4.75□□□□□ -1.65
LINC01049-201ENST00000426840 Q6ZRU5 148 aa4.75□□□□□ -1.65
LINC01049-201ENST00000426840 LINC00469Q8N7U9 141 aa4.75□□□□□ -1.65
LINC01049-201ENST00000426840 KRTAP17-1Q9BYP8 105 aa4.75□□□□□ -1.65
LINC01049-201ENST00000426840 CHTOPQ9Y3Y2 248 aaKnown RBP4.75□□□□□ -1.65
LINC01049-201ENST00000426840 C11orf86A6NJI1 115 aa4.74□□□□□ -1.65
LINC01049-201ENST00000426840 SMIM1B2RUZ4 78 aa4.74□□□□□ -1.65
LINC01049-201ENST00000426840 F8WDY8 70 aa4.74□□□□□ -1.65
LINC01049-201ENST00000426840 PANO1I0J062 215 aa4.74□□□□□ -1.65
LINC01049-201ENST00000426840 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
LINC01049-201ENST00000426840 C10orf25Q5T742 122 aa4.74□□□□□ -1.65
LINC01049-201ENST00000426840 UNQ6190/PRO20217Q6UXQ8 127 aa4.74□□□□□ -1.65
LINC01049-201ENST00000426840 PACRGQ96M98 296 aaPredicted RBP4.74□□□□□ -1.65
LINC01049-201ENST00000426840 CAMK2N2Q96S95 79 aa4.74□□□□□ -1.65
LINC01049-201ENST00000426840 MRPL35Q9NZE8 188 aaKnown RBP4.74□□□□□ -1.65
LINC01049-201ENST00000426840 HSPB8Q9UJY1 196 aa4.74□□□□□ -1.65
LINC01049-201ENST00000426840 F8VRH5 84 aa4.73□□□□□ -1.65
LINC01049-201ENST00000426840 SPINK8P0C7L1 97 aa4.73□□□□□ -1.65
LINC01049-201ENST00000426840 CIRBPQ14011 172 aaKnown RBP4.73□□□□□ -1.65
LINC01049-201ENST00000426840 C2orf82Q6UX34 121 aa4.73□□□□□ -1.65
LINC01049-201ENST00000426840 Q8IZM0 81 aa4.73□□□□□ -1.65
LINC01049-201ENST00000426840 CARD19Q96LW7 228 aa4.73□□□□□ -1.65
LINC01049-201ENST00000426840 CHAC1Q9BUX1 264 aa4.73□□□□□ -1.65
LINC01049-201ENST00000426840 HSPG2P98160 4391 aa4.73□□□□□ -1.65
LINC01049-201ENST00000426840 IGLV5-39A0A0G2JS06 123 aa4.72□□□□□ -1.65
LINC01049-201ENST00000426840 H3BRM9 83 aa4.72□□□□□ -1.65
LINC01049-201ENST00000426840 NDUFA1O15239 70 aa4.72□□□□□ -1.65
LINC01049-201ENST00000426840 HAMPP81172 84 aa4.72□□□□□ -1.65
LINC01049-201ENST00000426840 C6orf226Q5I0X4 101 aa4.72□□□□□ -1.65
LINC01049-201ENST00000426840 TOMM7Q9P0U1 55 aa4.72□□□□□ -1.65
LINC01049-201ENST00000426840 C6orf48Q9UBA6 75 aa4.72□□□□□ -1.65
LINC01049-201ENST00000426840 TMEM223A0PJW6 202 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 H0Y8G0 127 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 PRSS2P07478 247 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 CHTF8P0CG12 524 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 TMEM170BQ5T4T1 132 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 CIRBP-AS1Q8TBR5 109 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 COX7B2Q8TF08 81 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 MAP1LC3CQ9BXW4 147 aa4.71□□□□□ -1.66
LINC01049-201ENST00000426840 A0A096LNI7 61 aa4.7□□□□□ -1.66
LINC01049-201ENST00000426840 TRBV30A0A0K0K1B3 111 aa4.7□□□□□ -1.66
LINC01049-201ENST00000426840 LOC107984640A0A0U1RRK4 108 aa4.7□□□□□ -1.66
LINC01049-201ENST00000426840 SYS1-DBNDD2H3BUS1 97 aa4.7□□□□□ -1.66
LINC01049-201ENST00000426840 TLX1NBP0CAT3 122 aa4.7□□□□□ -1.66
LINC01049-201ENST00000426840 C3orf79P0CE67 100 aa4.7□□□□□ -1.66
LINC01049-201ENST00000426840 CKS1BP61024 79 aa4.7□□□□□ -1.66
LINC01049-201ENST00000426840 SCXQ7RTU7 201 aa4.7□□□□□ -1.66
LINC01049-201ENST00000426840 FAT1Q14517 4588 aa4.69□□□□□ -1.66
LINC01049-201ENST00000426840 A0A087WYN8 130 aa4.69□□□□□ -1.66
LINC01049-201ENST00000426840 DPM2O94777 84 aa4.69□□□□□ -1.66
LINC01049-201ENST00000426840 C9orf116Q5BN46 136 aaPredicted RBP4.69□□□□□ -1.66
LINC01049-201ENST00000426840 LINC01545Q5VT33 79 aa4.69□□□□□ -1.66
LINC01049-201ENST00000426840 PET117Q6UWS5 81 aa4.69□□□□□ -1.66
LINC01049-201ENST00000426840 Q6ZRP5 223 aa4.69□□□□□ -1.66
LINC01049-201ENST00000426840 HIST3H2BBQ8N257 126 aa4.69□□□□□ -1.66
LINC01049-201ENST00000426840 SPACA4Q8TDM5 124 aa4.69□□□□□ -1.66
LINC01049-201ENST00000426840 IGKV2-24A0A0C4DH68 120 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 EPM2AB3EWF7 344 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 IGKCP01834 107 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 SMR3BP02814 79 aaPredicted RBP4.68□□□□□ -1.66
LINC01049-201ENST00000426840 PLNP26678 52 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 CXCL5P42830 114 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 SNRPEP62304 92 aaKnown RBP4.68□□□□□ -1.66
LINC01049-201ENST00000426840 GAGE2BQ13066 116 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 MAJINQ3KP22 176 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 DPH3Q96FX2 82 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 HIST1H2BLQ99880 126 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 PLAC8Q9NZF1 115 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 PKIGQ9Y2B9 76 aa4.68□□□□□ -1.66
LINC01049-201ENST00000426840 A0A1W2PNN7 141 aa4.67□□□□□ -1.66
LINC01049-201ENST00000426840 C5orf52A6NGY3 159 aa4.67□□□□□ -1.66
LINC01049-201ENST00000426840 NDUFC2-KCTD14E9PQ53 114 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms