RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 IGHV1-58A0A0C4DH39 117 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 C11orf86A6NJI1 115 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 ZNF22P17026 224 aaPredicted RBP3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 MALP21145 153 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 KRTAP10-1P60331 282 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 KIAA0087Q14695 138 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 CFAP161Q6P656 301 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 LINC00518Q8N0U6 118 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 HIST3H2BBQ8N257 126 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 PMCHL2Q9BQD1 86 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 CHAC1Q9BUX1 264 aa3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 MRPL35Q9NZE8 188 aaKnown RBP3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 CHTOPQ9Y3Y2 248 aaKnown RBP3.7□□□□□ -1.82
HERPUD2-204ENST00000426180 C16orf90A8MZG2 172 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 SMIM1B2RUZ4 78 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 SPINK8P0C7L1 97 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 SNRPEP62304 92 aaKnown RBP3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 HERVK_113P63121 156 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 SPAG11BQ08648 103 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 ODF1Q14990 250 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 C14orf177Q52M58 125 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 C10orf25Q5T742 122 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 ORAOV1Q8WV07 137 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 GEMIN7Q9H840 131 aaKnown RBP3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 HSPB8Q9UJY1 196 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 DNAH5Q8TE73 4624 aa3.69□□□□□ -1.82
HERPUD2-204ENST00000426180 SYS1-DBNDD2H3BUS1 97 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 C3orf79P0CE67 100 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 GCSHP23434 173 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 CNBPP62633 177 aaKnown RBP3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 SEC11AP67812 179 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 C2orf82Q6UX34 121 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 UNQ6190/PRO20217Q6UXQ8 127 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 Q6ZRU5 148 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 LINC01561Q8N1V8 128 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 OR10D4PQ8NGN7 298 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 HIST1H2BLQ99880 126 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 FAM30AQ9NZY2 134 aa3.68□□□□□ -1.82
HERPUD2-204ENST00000426180 PKHD1P08F94 4074 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 IGLV5-39A0A0G2JS06 123 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 C5orf52A6NGY3 159 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 F8VRH5 84 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 PANO1I0J062 215 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 ZNF561-AS1K7EIQ3 104 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 APOMO95445 188 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 KRTDAPP60985 99 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 HAMPP81172 84 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 SYCNQ0VAF6 134 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 TMEM170BQ5T4T1 132 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 C9orf163Q8N9P6 203 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 PACRGQ96M98 296 aaPredicted RBP3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 MAP1LC3CQ9BXW4 147 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 TOMM7Q9P0U1 55 aa3.67□□□□□ -1.82
HERPUD2-204ENST00000426180 KIAA1109Q2LD37 5005 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 H3BRM9 83 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 C9orf116Q5BN46 136 aaPredicted RBP3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 LINC01545Q5VT33 79 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 PET117Q6UWS5 81 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 SDIM1Q6ZPB5 146 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 COX7B2Q8TF08 81 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 C2orf48Q96LS8 159 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 CARD19Q96LW7 228 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 CAMK2N2Q96S95 79 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 C6orf48Q9UBA6 75 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 RYR1P21817 5038 aa3.66□□□□□ -1.82
HERPUD2-204ENST00000426180 PCP4L1A6NKN8 68 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 NDUFA1O15239 70 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 DPM2O94777 84 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 IGKCP01834 107 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 PRSS2P07478 247 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 CHTF8P0CG12 524 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 PLNP26678 52 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 S100A2P29034 98 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 TSPEAR-AS2P59090 65 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 C6orf226Q5I0X4 101 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 Q8IZM0 81 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 ATOH7Q8N100 152 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 LRP1BQ9NZR2 4599 aa3.65□□□□□ -1.83
HERPUD2-204ENST00000426180 A0A096LNI7 61 aa3.64□□□□□ -1.83
HERPUD2-204ENST00000426180 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.64□□□□□ -1.83
HERPUD2-204ENST00000426180 HSBP1L1C9JCN9 74 aa3.64□□□□□ -1.83
HERPUD2-204ENST00000426180 XGP55808 180 aa3.64□□□□□ -1.83
HERPUD2-204ENST00000426180 Q6ZSA8 131 aa3.64□□□□□ -1.83
HERPUD2-204ENST00000426180 STPG4Q8N801 248 aa3.64□□□□□ -1.83
HERPUD2-204ENST00000426180 IGKV2-24A0A0C4DH68 120 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 F8WDY8 70 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 LEPROTO15243 131 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 PCP4P48539 62 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 CKS1BP61024 79 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 GAGE2BQ13066 116 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 MAJINQ3KP22 176 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 Q6ZRP5 223 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 ZNF625Q96I27 306 aaPredicted RBP3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 DNAH8Q96JB1 4490 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 HERC2O95714 4834 aa3.63□□□□□ -1.83
HERPUD2-204ENST00000426180 APOBP04114 4563 aaKnown RBP3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 IGKV2D-26A0A0A0MRZ7 120 aa3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms