RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CXCL5P42830 114 aa6.87□□□□□ -1.31
MDC1-205ENST00000425072 HERV-K104P63124 156 aa6.87□□□□□ -1.31
MDC1-205ENST00000425072 CIRBPQ14011 172 aaKnown RBP6.87□□□□□ -1.31
MDC1-205ENST00000425072 C14orf177Q52M58 125 aa6.87□□□□□ -1.31
MDC1-205ENST00000425072 Q6ZR54 194 aa6.87□□□□□ -1.31
MDC1-205ENST00000425072 MIEN1Q9BRT3 115 aa6.87□□□□□ -1.31
MDC1-205ENST00000425072 NDUFA12Q9UI09 145 aa6.87□□□□□ -1.31
MDC1-205ENST00000425072 ZNF815PA8K554 130 aa6.86□□□□□ -1.31
MDC1-205ENST00000425072 C1orf134Q5TEV5 83 aa6.86□□□□□ -1.31
MDC1-205ENST00000425072 PCP2Q8IVA1 136 aa6.86□□□□□ -1.31
MDC1-205ENST00000425072 C6orf223Q8N319 242 aa6.86□□□□□ -1.31
MDC1-205ENST00000425072 MAPKAPK5-AS1Q8N8E1 139 aa6.86□□□□□ -1.31
MDC1-205ENST00000425072 KRTAP1-5Q9BYS1 174 aa6.86□□□□□ -1.31
MDC1-205ENST00000425072 PRO1933Q9H354 126 aa6.86□□□□□ -1.31
MDC1-205ENST00000425072 NDUFA1O15239 70 aa6.85□□□□□ -1.31
MDC1-205ENST00000425072 KIAA0087Q14695 138 aa6.85□□□□□ -1.31
MDC1-205ENST00000425072 SCGB1D4Q6XE38 83 aa6.85□□□□□ -1.31
MDC1-205ENST00000425072 C2orf48Q96LS8 159 aa6.85□□□□□ -1.31
MDC1-205ENST00000425072 LYSTQ99698 3801 aa6.84□□□□□ -1.31
MDC1-205ENST00000425072 SPAG11BQ08648 103 aa6.84□□□□□ -1.31
MDC1-205ENST00000425072 NTN5Q8WTR8 489 aaPredicted RBP6.84□□□□□ -1.31
MDC1-205ENST00000425072 GVQW2A0A096LPI5 108 aaPredicted RBP6.83□□□□□ -1.32
MDC1-205ENST00000425072 USP17L23D6RBM5 183 aa6.83□□□□□ -1.32
MDC1-205ENST00000425072 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
MDC1-205ENST00000425072 HIGD1BQ9P298 99 aa6.83□□□□□ -1.32
MDC1-205ENST00000425072 LCE6AA0A183 80 aa6.82□□□□□ -1.32
MDC1-205ENST00000425072 GCSHP23434 173 aa6.82□□□□□ -1.32
MDC1-205ENST00000425072 TSPEAR-AS2P59090 65 aa6.82□□□□□ -1.32
MDC1-205ENST00000425072 COX17Q14061 63 aa6.82□□□□□ -1.32
MDC1-205ENST00000425072 CAMK2N2Q96S95 79 aa6.82□□□□□ -1.32
MDC1-205ENST00000425072 TTTY13Q9BZ97 58 aa6.82□□□□□ -1.32
MDC1-205ENST00000425072 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 TIMM17BO60830 172 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 HNRNPA3P51991 378 aaKnown RBP6.81□□□□□ -1.32
MDC1-205ENST00000425072 SYCNQ0VAF6 134 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 SRSF9Q13242 221 aaKnown RBP eCLIP6.81□□□□□ -1.32
MDC1-205ENST00000425072 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 HIGD2BQ4VC39 106 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 MEIG1Q5JSS6 88 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 Q6ZVH6 145 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 C15orf56Q8N910 161 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 COPS9Q8WXC6 57 aa6.81□□□□□ -1.32
MDC1-205ENST00000425072 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
MDC1-205ENST00000425072 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.8□□□□□ -1.32
MDC1-205ENST00000425072 TMEM238C9JI98 176 aa6.8□□□□□ -1.32
MDC1-205ENST00000425072 TAL2Q16559 108 aa6.8□□□□□ -1.32
MDC1-205ENST00000425072 UNQ6190/PRO20217Q6UXQ8 127 aa6.8□□□□□ -1.32
MDC1-205ENST00000425072 Q6ZRN7 208 aaPredicted RBP6.8□□□□□ -1.32
MDC1-205ENST00000425072 DDTP30046 118 aa6.79□□□□□ -1.32
MDC1-205ENST00000425072 LINC00158P58513 81 aa6.79□□□□□ -1.32
MDC1-205ENST00000425072 C2orf82Q6UX34 121 aa6.79□□□□□ -1.32
MDC1-205ENST00000425072 STARD9Q9P2P6 4700 aa6.78□□□□□ -1.32
MDC1-205ENST00000425072 LRCOL1A6NCL2 159 aa6.78□□□□□ -1.32
MDC1-205ENST00000425072 LINC00526Q96FQ7 95 aa6.78□□□□□ -1.32
MDC1-205ENST00000425072 HIST1H4GQ99525 98 aa6.78□□□□□ -1.32
MDC1-205ENST00000425072 SPANXB1Q9NS25 103 aaPredicted RBP6.78□□□□□ -1.32
MDC1-205ENST00000425072 ERG28Q9UKR5 140 aa6.78□□□□□ -1.32
MDC1-205ENST00000425072 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
MDC1-205ENST00000425072 PCP4L1A6NKN8 68 aa6.77□□□□□ -1.33
MDC1-205ENST00000425072 LECT2O14960 151 aa6.77□□□□□ -1.33
MDC1-205ENST00000425072 SMIM13P0DJ93 91 aa6.77□□□□□ -1.33
MDC1-205ENST00000425072 IFITM1P13164 125 aa6.77□□□□□ -1.33
MDC1-205ENST00000425072 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
MDC1-205ENST00000425072 A0A087WTM6 91 aa6.76□□□□□ -1.33
MDC1-205ENST00000425072 PFN2P35080 140 aa6.76□□□□□ -1.33
MDC1-205ENST00000425072 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
MDC1-205ENST00000425072 CTAG1AP78358 180 aa6.76□□□□□ -1.33
MDC1-205ENST00000425072 C2orf91Q6ZV80 131 aa6.76□□□□□ -1.33
MDC1-205ENST00000425072 CARD19Q96LW7 228 aa6.76□□□□□ -1.33
MDC1-205ENST00000425072 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
MDC1-205ENST00000425072 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
MDC1-205ENST00000425072 M0R143 59 aa6.75□□□□□ -1.33
MDC1-205ENST00000425072 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
MDC1-205ENST00000425072 HSD52Q0P140 79 aa6.75□□□□□ -1.33
MDC1-205ENST00000425072 C10orf25Q5T742 122 aa6.75□□□□□ -1.33
MDC1-205ENST00000425072 Q6ZRU5 148 aa6.75□□□□□ -1.33
MDC1-205ENST00000425072 Q8N814 137 aa6.75□□□□□ -1.33
MDC1-205ENST00000425072 C6orf48Q9UBA6 75 aa6.75□□□□□ -1.33
MDC1-205ENST00000425072 TP73-AS1Q9UF72 201 aa6.75□□□□□ -1.33
MDC1-205ENST00000425072 A0A0U1RRA0 63 aa6.74□□□□□ -1.33
MDC1-205ENST00000425072 NDUFC2-KCTD14E9PQ53 114 aa6.74□□□□□ -1.33
MDC1-205ENST00000425072 SLPIP03973 132 aa6.74□□□□□ -1.33
MDC1-205ENST00000425072 TLX1NBP0CAT3 122 aa6.74□□□□□ -1.33
MDC1-205ENST00000425072 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
MDC1-205ENST00000425072 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
MDC1-205ENST00000425072 PPDPFQ9H3Y8 114 aa6.74□□□□□ -1.33
MDC1-205ENST00000425072 WFDC2Q14508 124 aa6.73□□□□□ -1.33
MDC1-205ENST00000425072 C9orf116Q5BN46 136 aaPredicted RBP6.73□□□□□ -1.33
MDC1-205ENST00000425072 LINC00336Q6ZUF6 198 aa6.73□□□□□ -1.33
MDC1-205ENST00000425072 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
MDC1-205ENST00000425072 CEND1Q8N111 149 aa6.73□□□□□ -1.33
MDC1-205ENST00000425072 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
MDC1-205ENST00000425072 LITAFQ99732 161 aa6.73□□□□□ -1.33
MDC1-205ENST00000425072 FRAS1Q86XX4 4008 aa6.73□□□□□ -1.33
MDC1-205ENST00000425072 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.72□□□□□ -1.33
MDC1-205ENST00000425072 LOC107984156A0A0G2JMH3 177 aa6.72□□□□□ -1.33
MDC1-205ENST00000425072 LOC107984640A0A0U1RRK4 108 aa6.72□□□□□ -1.33
MDC1-205ENST00000425072 RTL8CO15255 209 aa6.72□□□□□ -1.33
MDC1-205ENST00000425072 ARL17AQ8IVW1 177 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 536.4 ms