RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 LINC00469Q8N7U9 141 aa6.91□□□□□ -1.3
USP49-204ENST00000423567 TOMM7Q9P0U1 55 aa6.91□□□□□ -1.3
USP49-204ENST00000423567 VPS13BQ7Z7G8 4022 aa6.91□□□□□ -1.3
USP49-204ENST00000423567 A0A0J9YXV3 536 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 HBDP02042 147 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 KRTAP10-4P60372 401 aaPredicted RBP6.9□□□□□ -1.3
USP49-204ENST00000423567 CKS1BP61024 79 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 PMVKQ15126 192 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 C6orf226Q5I0X4 101 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 CDKN2A-AS1Q9UH64 79 aa6.9□□□□□ -1.3
USP49-204ENST00000423567 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
USP49-204ENST00000423567 NDUFA6P56556 154 aa6.89□□□□□ -1.31
USP49-204ENST00000423567 C10orf25Q5T742 122 aa6.89□□□□□ -1.31
USP49-204ENST00000423567 CBLN2Q8IUK8 224 aa6.89□□□□□ -1.31
USP49-204ENST00000423567 Q8IZM0 81 aa6.89□□□□□ -1.31
USP49-204ENST00000423567 SLC7A5P1Q8MH63 180 aa6.89□□□□□ -1.31
USP49-204ENST00000423567 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
USP49-204ENST00000423567 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
USP49-204ENST00000423567 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
USP49-204ENST00000423567 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
USP49-204ENST00000423567 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
USP49-204ENST00000423567 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
USP49-204ENST00000423567 H3BRM9 83 aa6.87□□□□□ -1.31
USP49-204ENST00000423567 ATP5LO75964 103 aa6.87□□□□□ -1.31
USP49-204ENST00000423567 CXCL5P42830 114 aa6.87□□□□□ -1.31
USP49-204ENST00000423567 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
USP49-204ENST00000423567 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
USP49-204ENST00000423567 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
USP49-204ENST00000423567 IGLV5-45A0A087WSX0 123 aa6.86□□□□□ -1.31
USP49-204ENST00000423567 NDUFC2-KCTD14E9PQ53 114 aa6.86□□□□□ -1.31
USP49-204ENST00000423567 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
USP49-204ENST00000423567 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
USP49-204ENST00000423567 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
USP49-204ENST00000423567 CHCHD1Q96BP2 118 aaKnown RBP6.86□□□□□ -1.31
USP49-204ENST00000423567 A0A096LNJ9 63 aa6.85□□□□□ -1.31
USP49-204ENST00000423567 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
USP49-204ENST00000423567 KRTAP29-1A8MX34 341 aaPredicted RBP6.85□□□□□ -1.31
USP49-204ENST00000423567 F8VRH5 84 aa6.85□□□□□ -1.31
USP49-204ENST00000423567 OXTP01178 125 aa6.85□□□□□ -1.31
USP49-204ENST00000423567 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
USP49-204ENST00000423567 Q6ZRP5 223 aa6.85□□□□□ -1.31
USP49-204ENST00000423567 BAGE3Q86Y29 109 aa6.85□□□□□ -1.31
USP49-204ENST00000423567 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.31
USP49-204ENST00000423567 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
USP49-204ENST00000423567 IGLC3P0DOY3 106 aa6.84□□□□□ -1.31
USP49-204ENST00000423567 PRR3P79522 188 aaKnown RBP6.84□□□□□ -1.31
USP49-204ENST00000423567 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
USP49-204ENST00000423567 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
USP49-204ENST00000423567 HSBP1O75506 76 aa6.83□□□□□ -1.32
USP49-204ENST00000423567 TRGC2P03986 189 aa6.83□□□□□ -1.32
USP49-204ENST00000423567 HNRNPA3P51991 378 aaKnown RBP6.83□□□□□ -1.32
USP49-204ENST00000423567 DMBT1Q9UGM3 2413 aaPredicted RBP6.83□□□□□ -1.32
USP49-204ENST00000423567 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
USP49-204ENST00000423567 PHF5AQ7RTV0 110 aaKnown RBP6.81□□□□□ -1.32
USP49-204ENST00000423567 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
USP49-204ENST00000423567 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
USP49-204ENST00000423567 ZNF22P17026 224 aaPredicted RBP6.8□□□□□ -1.32
USP49-204ENST00000423567 LINC00310P59036 64 aa6.8□□□□□ -1.32
USP49-204ENST00000423567 TMEM170BQ5T4T1 132 aa6.8□□□□□ -1.32
USP49-204ENST00000423567 IFI27L1Q96BM0 104 aa6.8□□□□□ -1.32
USP49-204ENST00000423567 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
USP49-204ENST00000423567 M0QXV9 152 aa6.79□□□□□ -1.32
USP49-204ENST00000423567 UBE2BP63146 152 aa6.79□□□□□ -1.32
USP49-204ENST00000423567 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
USP49-204ENST00000423567 SPINK6Q6UWN8 80 aa6.79□□□□□ -1.32
USP49-204ENST00000423567 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
USP49-204ENST00000423567 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
USP49-204ENST00000423567 IGLV5-39A0A0G2JS06 123 aa6.78□□□□□ -1.32
USP49-204ENST00000423567 C11orf86A6NJI1 115 aa6.78□□□□□ -1.32
USP49-204ENST00000423567 COLCA2A8K830 154 aa6.78□□□□□ -1.32
USP49-204ENST00000423567 C1orf137Q5JT78 98 aa6.78□□□□□ -1.32
USP49-204ENST00000423567 FAM19A2Q8N3H0 131 aa6.78□□□□□ -1.32
USP49-204ENST00000423567 PSORS1C2Q9UIG4 136 aa6.78□□□□□ -1.32
USP49-204ENST00000423567 SERF1AO75920 110 aa6.77□□□□□ -1.33
USP49-204ENST00000423567 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
USP49-204ENST00000423567 SFTA2Q6UW10 78 aa6.77□□□□□ -1.33
USP49-204ENST00000423567 REG3GQ6UW15 175 aa6.77□□□□□ -1.33
USP49-204ENST00000423567 HERC1Q15751 4861 aa6.76□□□□□ -1.33
USP49-204ENST00000423567 LBHQ53QV2 105 aaPredicted RBP6.76□□□□□ -1.33
USP49-204ENST00000423567 H0Y8G0 127 aa6.75□□□□□ -1.33
USP49-204ENST00000423567 HSPB8Q9UJY1 196 aa6.75□□□□□ -1.33
USP49-204ENST00000423567 PFN2P35080 140 aa6.74□□□□□ -1.33
USP49-204ENST00000423567 ANKRD39Q53RE8 183 aa6.74□□□□□ -1.33
USP49-204ENST00000423567 SERTAD4-AS1Q5TG53 156 aa6.74□□□□□ -1.33
USP49-204ENST00000423567 KRTAP7-1Q8IUC3 87 aa6.74□□□□□ -1.33
USP49-204ENST00000423567 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
USP49-204ENST00000423567 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
USP49-204ENST00000423567 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
USP49-204ENST00000423567 TMEM223A0PJW6 202 aa6.73□□□□□ -1.33
USP49-204ENST00000423567 SCO1O75880 301 aa6.73□□□□□ -1.33
USP49-204ENST00000423567 SRSF9Q13242 221 aaKnown RBP eCLIP6.73□□□□□ -1.33
USP49-204ENST00000423567 COX17Q14061 63 aa6.73□□□□□ -1.33
USP49-204ENST00000423567 ODF1Q14990 250 aa6.73□□□□□ -1.33
USP49-204ENST00000423567 TP73-AS1Q9UF72 201 aa6.73□□□□□ -1.33
USP49-204ENST00000423567 ERG28Q9UKR5 140 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms