RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 SCGB3A1Q96QR1 104 aa4.79□□□□□ -1.64
AC012560.1-202ENST00000421324 SMCO4Q9NRQ5 59 aa4.79□□□□□ -1.64
AC012560.1-202ENST00000421324 TRAPPC1Q9Y5R8 145 aa4.79□□□□□ -1.64
AC012560.1-202ENST00000421324 KRTAP29-1A8MX34 341 aaPredicted RBP4.78□□□□□ -1.64
AC012560.1-202ENST00000421324 NDUFA1O15239 70 aa4.78□□□□□ -1.64
AC012560.1-202ENST00000421324 IGKV2-30P06310 120 aa4.78□□□□□ -1.64
AC012560.1-202ENST00000421324 UBE2D1P51668 147 aa4.78□□□□□ -1.64
AC012560.1-202ENST00000421324 GAGE2BQ13066 116 aa4.78□□□□□ -1.64
AC012560.1-202ENST00000421324 AMELXQ99217 191 aa4.78□□□□□ -1.64
AC012560.1-202ENST00000421324 TIMM17AQ99595 171 aa4.78□□□□□ -1.64
AC012560.1-202ENST00000421324 LINC01546A6NGU7 62 aa4.77□□□□□ -1.65
AC012560.1-202ENST00000421324 ZC2HC1BQ5TFG8 222 aa4.77□□□□□ -1.65
AC012560.1-202ENST00000421324 LINC01561Q8N1V8 128 aa4.77□□□□□ -1.65
AC012560.1-202ENST00000421324 GEMIN7Q9H840 131 aaKnown RBP4.77□□□□□ -1.65
AC012560.1-202ENST00000421324 MRPL35Q9NZE8 188 aaKnown RBP4.77□□□□□ -1.65
AC012560.1-202ENST00000421324 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 A0A0J9YXV3 536 aa4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 PRSS2P07478 247 aa4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 LINC00614P0C842 121 aa4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 KRTAP10-4P60372 401 aaPredicted RBP4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 HERVK_113P63121 156 aa4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 RPL18AQ02543 176 aaKnown RBP4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 C6orf226Q5I0X4 101 aa4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 UNQ6190/PRO20217Q6UXQ8 127 aa4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 LINC00173Q6ZV60 143 aa4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 FAM19A3Q7Z5A8 133 aa4.76□□□□□ -1.65
AC012560.1-202ENST00000421324 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.75□□□□□ -1.65
AC012560.1-202ENST00000421324 RAB5BP61020 215 aa4.75□□□□□ -1.65
AC012560.1-202ENST00000421324 CKS1BP61024 79 aa4.75□□□□□ -1.65
AC012560.1-202ENST00000421324 KIAA0087Q14695 138 aa4.75□□□□□ -1.65
AC012560.1-202ENST00000421324 C10orf25Q5T742 122 aa4.75□□□□□ -1.65
AC012560.1-202ENST00000421324 PACRGQ96M98 296 aaPredicted RBP4.75□□□□□ -1.65
AC012560.1-202ENST00000421324 TOMM7Q9P0U1 55 aa4.75□□□□□ -1.65
AC012560.1-202ENST00000421324 TRBV30A0A0K0K1B3 111 aa4.74□□□□□ -1.65
AC012560.1-202ENST00000421324 OXTP01178 125 aa4.74□□□□□ -1.65
AC012560.1-202ENST00000421324 PMVKQ15126 192 aa4.74□□□□□ -1.65
AC012560.1-202ENST00000421324 C18orf32Q8TCD1 76 aa4.74□□□□□ -1.65
AC012560.1-202ENST00000421324 CST9LQ9H4G1 147 aa4.74□□□□□ -1.65
AC012560.1-202ENST00000421324 C6orf48Q9UBA6 75 aa4.74□□□□□ -1.65
AC012560.1-202ENST00000421324 CDKN2A-AS1Q9UH64 79 aa4.74□□□□□ -1.65
AC012560.1-202ENST00000421324 SRRM2Q9UQ35 2752 aaKnown RBP4.74□□□□□ -1.65
AC012560.1-202ENST00000421324 TINCRA0A1B0GVN0 87 aa4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 TLX1NBP0CAT3 122 aa4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 NDUFA6P56556 154 aa4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 GAGE2EQ4V326 116 aa4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 C9orf116Q5BN46 136 aaPredicted RBP4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 C2orf82Q6UX34 121 aa4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 Q8IZM0 81 aa4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 LINC00469Q8N7U9 141 aa4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 GAGE2DQ9UEU5 116 aa4.73□□□□□ -1.65
AC012560.1-202ENST00000421324 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
AC012560.1-202ENST00000421324 HBDP02042 147 aa4.72□□□□□ -1.65
AC012560.1-202ENST00000421324 PDZD11Q5EBL8 140 aa4.72□□□□□ -1.65
AC012560.1-202ENST00000421324 Q6ZRP5 223 aa4.72□□□□□ -1.65
AC012560.1-202ENST00000421324 SLC7A5P1Q8MH63 180 aa4.72□□□□□ -1.65
AC012560.1-202ENST00000421324 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 NDUFC2-KCTD14E9PQ53 114 aa4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 H3BRM9 83 aa4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 ATP5LO75964 103 aa4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 HNRNPA3P51991 378 aaKnown RBP4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 PRR3P79522 188 aaKnown RBP4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 PMCHL1Q16048 86 aa4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 CBLN2Q8IUK8 224 aa4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 URB1-AS1Q96HZ7 61 aa4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 YPEL4Q96NS1 127 aa4.71□□□□□ -1.66
AC012560.1-202ENST00000421324 DNAH8Q96JB1 4490 aa4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 SMIM1B2RUZ4 78 aa4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 F8VRH5 84 aa4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 CXCL5P42830 114 aa4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 BAGE3Q86Y29 109 aa4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 COX7B2Q8TF08 81 aa4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 CHCHD1Q96BP2 118 aaKnown RBP4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 FAT1Q14517 4588 aa4.7□□□□□ -1.66
AC012560.1-202ENST00000421324 A0A096LNJ9 63 aa4.69□□□□□ -1.66
AC012560.1-202ENST00000421324 SPINK8P0C7L1 97 aa4.69□□□□□ -1.66
AC012560.1-202ENST00000421324 PHF5AQ7RTV0 110 aaKnown RBP4.69□□□□□ -1.66
AC012560.1-202ENST00000421324 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
AC012560.1-202ENST00000421324 FAM168BA1KXE4 195 aa4.68□□□□□ -1.66
AC012560.1-202ENST00000421324 HSBP1O75506 76 aa4.68□□□□□ -1.66
AC012560.1-202ENST00000421324 IGLC3P0DOY3 106 aa4.68□□□□□ -1.66
AC012560.1-202ENST00000421324 SPINK6Q6UWN8 80 aa4.68□□□□□ -1.66
AC012560.1-202ENST00000421324 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
AC012560.1-202ENST00000421324 TRGC2P03986 189 aa4.67□□□□□ -1.66
AC012560.1-202ENST00000421324 UBE2BP63146 152 aa4.67□□□□□ -1.66
AC012560.1-202ENST00000421324 C9orf129Q5T035 196 aaKnown RBP4.67□□□□□ -1.66
AC012560.1-202ENST00000421324 TMEM170BQ5T4T1 132 aa4.67□□□□□ -1.66
AC012560.1-202ENST00000421324 REG3GQ6UW15 175 aa4.67□□□□□ -1.66
AC012560.1-202ENST00000421324 IFI27L1Q96BM0 104 aa4.67□□□□□ -1.66
AC012560.1-202ENST00000421324 PSORS1C2Q9UIG4 136 aa4.67□□□□□ -1.66
AC012560.1-202ENST00000421324 CHTOPQ9Y3Y2 248 aaKnown RBP4.67□□□□□ -1.66
AC012560.1-202ENST00000421324 M0QXV9 152 aa4.66□□□□□ -1.66
AC012560.1-202ENST00000421324 ZNF22P17026 224 aaPredicted RBP4.66□□□□□ -1.66
AC012560.1-202ENST00000421324 SRSF9Q13242 221 aaKnown RBP eCLIP4.66□□□□□ -1.66
AC012560.1-202ENST00000421324 LBHQ53QV2 105 aaPredicted RBP4.66□□□□□ -1.66
AC012560.1-202ENST00000421324 C1orf137Q5JT78 98 aa4.66□□□□□ -1.66
AC012560.1-202ENST00000421324 XAGE1AQ9HD64 81 aa4.66□□□□□ -1.66
AC012560.1-202ENST00000421324 TRAV12-1A0A0B4J245 112 aa4.65□□□□□ -1.67
AC012560.1-202ENST00000421324 IGLV5-39A0A0G2JS06 123 aa4.65□□□□□ -1.67
AC012560.1-202ENST00000421324 C11orf86A6NJI1 115 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms