RNA–Protein interactions for RNA: ENST00000421259.2

MATN3-202, Transcript of matrilin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MATN3, Length 1,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-202ENST00000421259 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
MATN3-202ENST00000421259 PACRGQ96M98 296 aaPredicted RBP10.2□□□□□ -0.78
MATN3-202ENST00000421259 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
MATN3-202ENST00000421259 NDUFA6P56556 154 aa10.19□□□□□ -0.78
MATN3-202ENST00000421259 PMVKQ15126 192 aa10.19□□□□□ -0.78
MATN3-202ENST00000421259 GAGE2EQ4V326 116 aa10.19□□□□□ -0.78
MATN3-202ENST00000421259 GAGE2DQ9UEU5 116 aa10.19□□□□□ -0.78
MATN3-202ENST00000421259 CKS1BP61024 79 aa10.18□□□□□ -0.78
MATN3-202ENST00000421259 TRBV30A0A0K0K1B3 111 aa10.17□□□□□ -0.78
MATN3-202ENST00000421259 HBDP02042 147 aa10.17□□□□□ -0.78
MATN3-202ENST00000421259 TLX1NBP0CAT3 122 aa10.17□□□□□ -0.78
MATN3-202ENST00000421259 Q8IZM0 81 aa10.17□□□□□ -0.78
MATN3-202ENST00000421259 FAM168BA1KXE4 195 aa10.16□□□□□ -0.78
MATN3-202ENST00000421259 RAB5BP61020 215 aa10.16□□□□□ -0.78
MATN3-202ENST00000421259 PRR3P79522 188 aaKnown RBP10.16□□□□□ -0.78
MATN3-202ENST00000421259 SMIM1B2RUZ4 78 aa10.16□□□□□ -0.78
MATN3-202ENST00000421259 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
MATN3-202ENST00000421259 PHF5AQ7RTV0 110 aaKnown RBP10.16□□□□□ -0.78
MATN3-202ENST00000421259 PDZD11Q5EBL8 140 aa10.15□□□□□ -0.79
MATN3-202ENST00000421259 IGLV5-45A0A087WSX0 123 aa10.14□□□□□ -0.79
MATN3-202ENST00000421259 NDUFC2-KCTD14E9PQ53 114 aa10.14□□□□□ -0.79
MATN3-202ENST00000421259 OXTP01178 125 aa10.14□□□□□ -0.79
MATN3-202ENST00000421259 FAM19A5Q7Z5A7 132 aaPredicted RBP10.13□□□□□ -0.79
MATN3-202ENST00000421259 TRGC2P03986 189 aa10.12□□□□□ -0.79
MATN3-202ENST00000421259 COX7B2Q8TF08 81 aa10.12□□□□□ -0.79
MATN3-202ENST00000421259 F8VRH5 84 aa10.11□□□□□ -0.79
MATN3-202ENST00000421259 ATP5LO75964 103 aa10.11□□□□□ -0.79
MATN3-202ENST00000421259 IGLC3P0DOY3 106 aa10.11□□□□□ -0.79
MATN3-202ENST00000421259 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
MATN3-202ENST00000421259 BAGE3Q86Y29 109 aa10.11□□□□□ -0.79
MATN3-202ENST00000421259 KRTAP7-1Q8IUC3 87 aa10.11□□□□□ -0.79
MATN3-202ENST00000421259 CHCHD1Q96BP2 118 aaKnown RBP10.1□□□□□ -0.79
MATN3-202ENST00000421259 H3BRM9 83 aa10.09□□□□□ -0.79
MATN3-202ENST00000421259 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
MATN3-202ENST00000421259 PSORS1C2Q9UIG4 136 aa10.09□□□□□ -0.79
MATN3-202ENST00000421259 CXCL5P42830 114 aa10.08□□□□□ -0.8
MATN3-202ENST00000421259 FAM19A2Q8N3H0 131 aa10.08□□□□□ -0.8
MATN3-202ENST00000421259 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
MATN3-202ENST00000421259 KRTAP11-1Q8IUC1 163 aa10.07□□□□□ -0.8
MATN3-202ENST00000421259 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
MATN3-202ENST00000421259 COLCA2A8K830 154 aa10.07□□□□□ -0.8
MATN3-202ENST00000421259 M0QXV9 152 aa10.07□□□□□ -0.8
MATN3-202ENST00000421259 HSBP1O75506 76 aa10.06□□□□□ -0.8
MATN3-202ENST00000421259 C1orf137Q5JT78 98 aa10.06□□□□□ -0.8
MATN3-202ENST00000421259 IFI27L1Q96BM0 104 aa10.06□□□□□ -0.8
MATN3-202ENST00000421259 CHTOPQ9Y3Y2 248 aaKnown RBP10.06□□□□□ -0.8
MATN3-202ENST00000421259 SRSF9Q13242 221 aaKnown RBP eCLIP10.05□□□□□ -0.8
MATN3-202ENST00000421259 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
MATN3-202ENST00000421259 SERTAD4-AS1Q5TG53 156 aa10.05□□□□□ -0.8
MATN3-202ENST00000421259 IGLV5-39A0A0G2JS06 123 aa10.04□□□□□ -0.8
MATN3-202ENST00000421259 SCO1O75880 301 aa10.04□□□□□ -0.8
MATN3-202ENST00000421259 SPINK6Q6UWN8 80 aa10.04□□□□□ -0.8
MATN3-202ENST00000421259 SERF1AO75920 110 aa10.03□□□□□ -0.8
MATN3-202ENST00000421259 MT1HL1P0DM35 61 aa10.03□□□□□ -0.8
MATN3-202ENST00000421259 LINC00310P59036 64 aa10.03□□□□□ -0.8
MATN3-202ENST00000421259 UBE2BP63146 152 aa10.03□□□□□ -0.8
MATN3-202ENST00000421259 NUPR1O60356 82 aa10.01□□□□□ -0.81
MATN3-202ENST00000421259 C22orf24Q9Y442 160 aa10.01□□□□□ -0.81
MATN3-202ENST00000421259 TRAV12-1A0A0B4J245 112 aa10□□□□□ -0.81
MATN3-202ENST00000421259 H0Y8G0 127 aa10□□□□□ -0.81
MATN3-202ENST00000421259 PFN2P35080 140 aa10□□□□□ -0.81
MATN3-202ENST00000421259 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
MATN3-202ENST00000421259 IGLV7-43P04211 117 aa9.99□□□□□ -0.81
MATN3-202ENST00000421259 TNXBP22105 4242 aa9.98□□□□□ -0.81
MATN3-202ENST00000421259 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
MATN3-202ENST00000421259 FABP4P15090 132 aa9.98□□□□□ -0.81
MATN3-202ENST00000421259 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
MATN3-202ENST00000421259 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
MATN3-202ENST00000421259 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
MATN3-202ENST00000421259 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
MATN3-202ENST00000421259 ODF1Q14990 250 aa9.95□□□□□ -0.82
MATN3-202ENST00000421259 LBHQ53QV2 105 aaPredicted RBP9.95□□□□□ -0.82
MATN3-202ENST00000421259 MRPL55Q7Z7F7 128 aaKnown RBP9.95□□□□□ -0.82
MATN3-202ENST00000421259 GAGE10A6NGK3 116 aa9.93□□□□□ -0.82
MATN3-202ENST00000421259 LINC00167Q96N53 147 aa9.93□□□□□ -0.82
MATN3-202ENST00000421259 RPL37AP8A6NKH3 93 aa9.92□□□□□ -0.82
MATN3-202ENST00000421259 SND1-IT1Q9HBX3 110 aa9.92□□□□□ -0.82
MATN3-202ENST00000421259 TP73-AS1Q9UF72 201 aa9.92□□□□□ -0.82
MATN3-202ENST00000421259 HSPB8Q9UJY1 196 aa9.92□□□□□ -0.82
MATN3-202ENST00000421259 PLA2G2DQ9UNK4 145 aa9.92□□□□□ -0.82
MATN3-202ENST00000421259 A0A0U1RRA0 63 aa9.91□□□□□ -0.82
MATN3-202ENST00000421259 DIRC1Q969H9 104 aa9.91□□□□□ -0.82
MATN3-202ENST00000421259 PMCHL2Q9BQD1 86 aa9.91□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BKO60814 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BJP06899 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BOP23527 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BBP33778 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BDP58876 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BCP62807 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 COX17Q14061 63 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST2H2BEQ16778 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.9□□□□□ -0.82
MATN3-202ENST00000421259 NKAPP1Q8N9T2 125 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BHQ93079 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BNQ99877 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HIST1H2BMQ99879 126 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 HMCN2Q8NDA2 5059 aa9.9□□□□□ -0.82
MATN3-202ENST00000421259 LINC00158P58513 81 aa9.9□□□□□ -0.83
MATN3-202ENST00000421259 KRTAP10-8P60410 259 aa9.9□□□□□ -0.83
MATN3-202ENST00000421259 SFTA2Q6UW10 78 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms