RNA–Protein interactions for RNA: ENST00000421164.5

AFG3L1P-204, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, humanhuman

TSL 1 (best)

Gene AFG3L1P, Length 1,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFG3L1P-204ENST00000421164 Q6ZRU5 148 aa11.32□□□□□ -0.6
AFG3L1P-204ENST00000421164 CAMK2N2Q96S95 79 aa11.32□□□□□ -0.6
AFG3L1P-204ENST00000421164 TTTY13Q9BZ97 58 aa11.32□□□□□ -0.6
AFG3L1P-204ENST00000421164 PKHD1P08F94 4074 aa11.31□□□□□ -0.6
AFG3L1P-204ENST00000421164 A0A1B0GVY2 172 aa11.31□□□□□ -0.6
AFG3L1P-204ENST00000421164 J3QQQ9 107 aa11.31□□□□□ -0.6
AFG3L1P-204ENST00000421164 EREGO14944 169 aa11.31□□□□□ -0.6
AFG3L1P-204ENST00000421164 CKS1BP61024 79 aa11.3□□□□□ -0.6
AFG3L1P-204ENST00000421164 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
AFG3L1P-204ENST00000421164 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
AFG3L1P-204ENST00000421164 CNBPP62633 177 aaKnown RBP11.29□□□□□ -0.6
AFG3L1P-204ENST00000421164 LINC01620Q4KN68 170 aa11.29□□□□□ -0.6
AFG3L1P-204ENST00000421164 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
AFG3L1P-204ENST00000421164 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
AFG3L1P-204ENST00000421164 NDUFA1O15239 70 aa11.28□□□□□ -0.6
AFG3L1P-204ENST00000421164 NMUP48645 174 aa11.28□□□□□ -0.6
AFG3L1P-204ENST00000421164 C9orf116Q5BN46 136 aaPredicted RBP11.28□□□□□ -0.6
AFG3L1P-204ENST00000421164 C6orf48Q9UBA6 75 aa11.28□□□□□ -0.6
AFG3L1P-204ENST00000421164 CARD19Q96LW7 228 aa11.27□□□□□ -0.61
AFG3L1P-204ENST00000421164 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.61
AFG3L1P-204ENST00000421164 PAM16Q9Y3D7 125 aa11.27□□□□□ -0.61
AFG3L1P-204ENST00000421164 LGALS3P17931 250 aaKnown RBP11.26□□□□□ -0.61
AFG3L1P-204ENST00000421164 PCP2Q8IVA1 136 aa11.26□□□□□ -0.61
AFG3L1P-204ENST00000421164 F8WDY8 70 aa11.26□□□□□ -0.61
AFG3L1P-204ENST00000421164 CXCL5P42830 114 aa11.26□□□□□ -0.61
AFG3L1P-204ENST00000421164 VAMP8Q9BV40 100 aa11.26□□□□□ -0.61
AFG3L1P-204ENST00000421164 IGLV5-52A0A0A0MRZ9 124 aa11.25□□□□□ -0.61
AFG3L1P-204ENST00000421164 C9orf163Q8N9P6 203 aa11.25□□□□□ -0.61
AFG3L1P-204ENST00000421164 SPATA45Q537H7 98 aa11.24□□□□□ -0.61
AFG3L1P-204ENST00000421164 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
AFG3L1P-204ENST00000421164 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.23□□□□□ -0.61
AFG3L1P-204ENST00000421164 TP73-AS1Q9UF72 201 aa11.23□□□□□ -0.61
AFG3L1P-204ENST00000421164 DYNC1H1Q14204 4646 aaKnown RBP11.22□□□□□ -0.61
AFG3L1P-204ENST00000421164 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
AFG3L1P-204ENST00000421164 MYMXA0A1B0GTQ4 84 aa11.22□□□□□ -0.61
AFG3L1P-204ENST00000421164 ZNF815PA8K554 130 aa11.21□□□□□ -0.61
AFG3L1P-204ENST00000421164 SMIM6P0DI80 62 aa11.21□□□□□ -0.61
AFG3L1P-204ENST00000421164 RNF151Q2KHN1 245 aa11.21□□□□□ -0.61
AFG3L1P-204ENST00000421164 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.62
AFG3L1P-204ENST00000421164 EPPK1P58107 5090 aaKnown RBP11.2□□□□□ -0.62
AFG3L1P-204ENST00000421164 SDIM1Q6ZPB5 146 aa11.2□□□□□ -0.62
AFG3L1P-204ENST00000421164 C14orf144Q96I85 54 aa11.2□□□□□ -0.62
AFG3L1P-204ENST00000421164 DNAH8Q96JB1 4490 aa11.2□□□□□ -0.62
AFG3L1P-204ENST00000421164 A0A0J9YXY3 114 aa11.19□□□□□ -0.62
AFG3L1P-204ENST00000421164 PFN2P35080 140 aa11.19□□□□□ -0.62
AFG3L1P-204ENST00000421164 HERV-K104P63124 156 aa11.19□□□□□ -0.62
AFG3L1P-204ENST00000421164 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
AFG3L1P-204ENST00000421164 A0A0U1RRA0 63 aa11.18□□□□□ -0.62
AFG3L1P-204ENST00000421164 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
AFG3L1P-204ENST00000421164 SMIM13P0DJ93 91 aa11.18□□□□□ -0.62
AFG3L1P-204ENST00000421164 COX8AP10176 69 aa11.18□□□□□ -0.62
AFG3L1P-204ENST00000421164 Q6ZRP5 223 aa11.18□□□□□ -0.62
AFG3L1P-204ENST00000421164 GCSHP23434 173 aa11.17□□□□□ -0.62
AFG3L1P-204ENST00000421164 KRTAP10-1P60331 282 aa11.17□□□□□ -0.62
AFG3L1P-204ENST00000421164 S100A12P80511 92 aa11.16□□□□□ -0.62
AFG3L1P-204ENST00000421164 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
AFG3L1P-204ENST00000421164 BOD1L2Q8IYS8 172 aa11.16□□□□□ -0.62
AFG3L1P-204ENST00000421164 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
AFG3L1P-204ENST00000421164 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
AFG3L1P-204ENST00000421164 PANO1I0J062 215 aa11.15□□□□□ -0.62
AFG3L1P-204ENST00000421164 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
AFG3L1P-204ENST00000421164 A0A096LNI7 61 aa11.15□□□□□ -0.63
AFG3L1P-204ENST00000421164 CHTF8P0CG12 524 aa11.15□□□□□ -0.63
AFG3L1P-204ENST00000421164 LINC00158P58513 81 aa11.15□□□□□ -0.63
AFG3L1P-204ENST00000421164 RPL18AQ02543 176 aaKnown RBP11.15□□□□□ -0.63
AFG3L1P-204ENST00000421164 ADAMTSL4-AS1Q5T5F5 129 aa11.15□□□□□ -0.63
AFG3L1P-204ENST00000421164 C12orf57Q99622 126 aa11.15□□□□□ -0.63
AFG3L1P-204ENST00000421164 LITAFQ99732 161 aa11.15□□□□□ -0.63
AFG3L1P-204ENST00000421164 GAGE2BQ13066 116 aa11.14□□□□□ -0.63
AFG3L1P-204ENST00000421164 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
AFG3L1P-204ENST00000421164 DAND5Q8N907 189 aa11.14□□□□□ -0.63
AFG3L1P-204ENST00000421164 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
AFG3L1P-204ENST00000421164 C16orf90A8MZG2 172 aa11.13□□□□□ -0.63
AFG3L1P-204ENST00000421164 COX17Q14061 63 aa11.13□□□□□ -0.63
AFG3L1P-204ENST00000421164 IGKV2-24A0A0C4DH68 120 aa11.12□□□□□ -0.63
AFG3L1P-204ENST00000421164 SCGB1D4Q6XE38 83 aa11.12□□□□□ -0.63
AFG3L1P-204ENST00000421164 LINC00518Q8N0U6 118 aa11.12□□□□□ -0.63
AFG3L1P-204ENST00000421164 FAM30AQ9NZY2 134 aa11.12□□□□□ -0.63
AFG3L1P-204ENST00000421164 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.12□□□□□ -0.63
AFG3L1P-204ENST00000421164 PTTG1IPP53801 180 aa11.12□□□□□ -0.63
AFG3L1P-204ENST00000421164 MIR7-3HGQ8N6C7 128 aa11.12□□□□□ -0.63
AFG3L1P-204ENST00000421164 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
AFG3L1P-204ENST00000421164 DLEU1O43261 78 aa11.11□□□□□ -0.63
AFG3L1P-204ENST00000421164 SLC25A34Q6PIV7 304 aa11.11□□□□□ -0.63
AFG3L1P-204ENST00000421164 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
AFG3L1P-204ENST00000421164 PRO1933Q9H354 126 aa11.1□□□□□ -0.63
AFG3L1P-204ENST00000421164 SND1-IT1Q9HBX3 110 aa11.1□□□□□ -0.63
AFG3L1P-204ENST00000421164 LINC00587B1AMM8 73 aa11.09□□□□□ -0.63
AFG3L1P-204ENST00000421164 EIF4EBP3O60516 100 aaPredicted RBP11.09□□□□□ -0.63
AFG3L1P-204ENST00000421164 TIMM17BO60830 172 aa11.09□□□□□ -0.63
AFG3L1P-204ENST00000421164 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
AFG3L1P-204ENST00000421164 C2orf91Q6ZV80 131 aa11.08□□□□□ -0.64
AFG3L1P-204ENST00000421164 APOBP04114 4563 aaKnown RBP11.07□□□□□ -0.64
AFG3L1P-204ENST00000421164 FAM168BA1KXE4 195 aa11.06□□□□□ -0.64
AFG3L1P-204ENST00000421164 NPC2P61916 151 aa11.06□□□□□ -0.64
AFG3L1P-204ENST00000421164 Q6ZSA8 131 aa11.06□□□□□ -0.64
AFG3L1P-204ENST00000421164 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
AFG3L1P-204ENST00000421164 SOSTDC1Q6X4U4 206 aa11.06□□□□□ -0.64
AFG3L1P-204ENST00000421164 Q8NDZ9 215 aa11.06□□□□□ -0.64
AFG3L1P-204ENST00000421164 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms