RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CELA1Q9UNI1 258 aa7.62□□□□□ -1.19
PTCH1-206ENST00000421141 DSPP15924 2871 aaKnown RBP7.62□□□□□ -1.19
PTCH1-206ENST00000421141 TNRC18O15417 2968 aaPredicted RBP7.62□□□□□ -1.19
PTCH1-206ENST00000421141 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
PTCH1-206ENST00000421141 LAMA1P25391 3075 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 CHKB-CPT1BH3BT56 60 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 FOXI1Q12951 378 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 C6orf223Q8N319 242 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 H3BNG1 76 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 H3BT86 120 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 TCL1BO95988 128 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 IGLV9-49A0A0B4J1Y8 123 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 C5orf47Q569G3 176 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 C10orf25Q5T742 122 aa7.61□□□□□ -1.19
PTCH1-206ENST00000421141 C6orf99Q4VX62 202 aa7.6□□□□□ -1.19
PTCH1-206ENST00000421141 CELSR3Q9NYQ7 3312 aa7.6□□□□□ -1.19
PTCH1-206ENST00000421141 PPDPFQ9H3Y8 114 aa7.6□□□□□ -1.19
PTCH1-206ENST00000421141 IGLV4-60A0A075B6I1 120 aa7.6□□□□□ -1.19
PTCH1-206ENST00000421141 NDUFC2-KCTD14E9PQ53 114 aa7.59□□□□□ -1.19
PTCH1-206ENST00000421141 WFDC9Q8NEX5 89 aa7.59□□□□□ -1.19
PTCH1-206ENST00000421141 LINC01556Q5JQF7 62 aa7.59□□□□□ -1.19
PTCH1-206ENST00000421141 C2orf48Q96LS8 159 aa7.59□□□□□ -1.19
PTCH1-206ENST00000421141 UNQ6190/PRO20217Q6UXQ8 127 aa7.59□□□□□ -1.2
PTCH1-206ENST00000421141 IGKV4-1P06312 121 aa7.58□□□□□ -1.2
PTCH1-206ENST00000421141 IGIPA6NJ69 53 aa7.58□□□□□ -1.2
PTCH1-206ENST00000421141 BPY2O14599 106 aa7.58□□□□□ -1.2
PTCH1-206ENST00000421141 TEN1Q86WV5 123 aa7.58□□□□□ -1.2
PTCH1-206ENST00000421141 HRCT1Q6UXD1 115 aa7.58□□□□□ -1.2
PTCH1-206ENST00000421141 UPK3BQ9BT76 320 aa7.58□□□□□ -1.2
PTCH1-206ENST00000421141 C1orf137Q5JT78 98 aa7.58□□□□□ -1.2
PTCH1-206ENST00000421141 C11orf72Q8NBR9 251 aa7.58□□□□□ -1.2
PTCH1-206ENST00000421141 ZNF73O43830 326 aaPredicted RBP7.57□□□□□ -1.2
PTCH1-206ENST00000421141 COX6A2Q02221 97 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 LINC00242Q5T6M2 205 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 A8MZ25 164 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 LINC00694P0DN24 101 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 AKAP13Q12802 2813 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 Q6ZSN1 163 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 FRYLO94915 3013 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 MRPL55Q7Z7F7 128 aaKnown RBP7.57□□□□□ -1.2
PTCH1-206ENST00000421141 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 A0A096LNT2 108 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 GAS8-AS1O95177 125 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 LINC01561Q8N1V8 128 aa7.57□□□□□ -1.2
PTCH1-206ENST00000421141 USP34Q70CQ2 3546 aa7.56□□□□□ -1.2
PTCH1-206ENST00000421141 TEX15Q9BXT5 2789 aa7.56□□□□□ -1.2
PTCH1-206ENST00000421141 C3orf84H3BNL1 204 aa7.56□□□□□ -1.2
PTCH1-206ENST00000421141 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
PTCH1-206ENST00000421141 ESRGQ1W209 222 aa7.55□□□□□ -1.2
PTCH1-206ENST00000421141 CDPF1Q6NVV7 123 aa7.55□□□□□ -1.2
PTCH1-206ENST00000421141 SPINK6Q6UWN8 80 aa7.55□□□□□ -1.2
PTCH1-206ENST00000421141 KMT2BQ9UMN6 2715 aaPredicted RBP7.55□□□□□ -1.2
PTCH1-206ENST00000421141 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
PTCH1-206ENST00000421141 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
PTCH1-206ENST00000421141 C9orf116Q5BN46 136 aaPredicted RBP7.54□□□□□ -1.2
PTCH1-206ENST00000421141 FAM19A4Q96LR4 140 aa7.54□□□□□ -1.2
PTCH1-206ENST00000421141 Q8NAQ8 132 aa7.53□□□□□ -1.2
PTCH1-206ENST00000421141 C16orf90A8MZG2 172 aa7.53□□□□□ -1.2
PTCH1-206ENST00000421141 SMIM1B2RUZ4 78 aa7.53□□□□□ -1.2
PTCH1-206ENST00000421141 SVIPQ8NHG7 77 aa7.53□□□□□ -1.2
PTCH1-206ENST00000421141 CCKP06307 115 aa7.53□□□□□ -1.2
PTCH1-206ENST00000421141 SMIM11BQ8TCY0 68 aa7.53□□□□□ -1.2
PTCH1-206ENST00000421141 TEP1Q99973 2627 aaKnown RBP7.52□□□□□ -1.21
PTCH1-206ENST00000421141 SLPIP03973 132 aa7.52□□□□□ -1.21
PTCH1-206ENST00000421141 SMIM20Q8N5G0 67 aa7.52□□□□□ -1.21
PTCH1-206ENST00000421141 PRYO14603 147 aa7.52□□□□□ -1.21
PTCH1-206ENST00000421141 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.52□□□□□ -1.21
PTCH1-206ENST00000421141 MAPKAPK5-AS1Q8N8E1 139 aa7.52□□□□□ -1.21
PTCH1-206ENST00000421141 AMELXQ99217 191 aa7.52□□□□□ -1.21
PTCH1-206ENST00000421141 NBDYA0A0U1RRE5 68 aa7.51□□□□□ -1.21
PTCH1-206ENST00000421141 TRIAP1O43715 76 aa7.51□□□□□ -1.21
PTCH1-206ENST00000421141 X6R8D5 127 aa7.51□□□□□ -1.21
PTCH1-206ENST00000421141 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
PTCH1-206ENST00000421141 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
PTCH1-206ENST00000421141 CASC2Q6XLA1 102 aa7.51□□□□□ -1.21
PTCH1-206ENST00000421141 K7EIL1 84 aa7.51□□□□□ -1.21
PTCH1-206ENST00000421141 IGSF10Q6WRI0 2623 aa7.5□□□□□ -1.21
PTCH1-206ENST00000421141 Q6ZQY7 126 aa7.5□□□□□ -1.21
PTCH1-206ENST00000421141 YPEL4Q96NS1 127 aa7.5□□□□□ -1.21
PTCH1-206ENST00000421141 MAP1AP78559 2803 aaPredicted RBP7.5□□□□□ -1.21
PTCH1-206ENST00000421141 KRTAP10-11P60412 298 aa7.5□□□□□ -1.21
PTCH1-206ENST00000421141 SEC61GP60059 68 aa7.49□□□□□ -1.21
PTCH1-206ENST00000421141 VCANP13611 3396 aa7.49□□□□□ -1.21
PTCH1-206ENST00000421141 ATOX1O00244 68 aa7.48□□□□□ -1.21
PTCH1-206ENST00000421141 TRBV10-3A0A0K0K1G6 114 aa7.48□□□□□ -1.21
PTCH1-206ENST00000421141 WFDC2Q14508 124 aa7.48□□□□□ -1.21
PTCH1-206ENST00000421141 LINC00315P59091 139 aa7.48□□□□□ -1.21
PTCH1-206ENST00000421141 ITPR2Q14571 2701 aa7.47□□□□□ -1.21
PTCH1-206ENST00000421141 TAX1BP3O14907 124 aa7.47□□□□□ -1.21
PTCH1-206ENST00000421141 Q6ZRU5 148 aa7.47□□□□□ -1.21
PTCH1-206ENST00000421141 KLK9Q2XQG4 91 aa7.46□□□□□ -1.21
PTCH1-206ENST00000421141 LINC00588Q9Y4M8 146 aa7.46□□□□□ -1.22
PTCH1-206ENST00000421141 NDUFV3P56181 108 aaKnown RBP7.46□□□□□ -1.22
PTCH1-206ENST00000421141 RTL8CO15255 209 aa7.45□□□□□ -1.22
PTCH1-206ENST00000421141 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
PTCH1-206ENST00000421141 NDUFC2O95298 119 aa7.45□□□□□ -1.22
PTCH1-206ENST00000421141 LIMD2Q9BT23 127 aa7.45□□□□□ -1.22
PTCH1-206ENST00000421141 ATP5EP2Q5VTU8 51 aa7.44□□□□□ -1.22
PTCH1-206ENST00000421141 Q6JHZ5 121 aa7.44□□□□□ -1.22
PTCH1-206ENST00000421141 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms