RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 C5P01031 1676 aa2.62□□□□□ -1.99
PTP4A1P1-201ENST00000420539 ITSN2Q9NZM3 1697 aa2.62□□□□□ -1.99
PTP4A1P1-201ENST00000420539 NCOA6Q14686 2063 aaPredicted RBP2.62□□□□□ -1.99
PTP4A1P1-201ENST00000420539 GLI2P10070 1586 aa2.61□□□□□ -1.99
PTP4A1P1-201ENST00000420539 LRP6O75581 1613 aa2.61□□□□□ -1.99
PTP4A1P1-201ENST00000420539 RALGAPBQ86X10 1494 aa2.61□□□□□ -1.99
PTP4A1P1-201ENST00000420539 ATXN8Q156A1 80 aa2.61□□□□□ -1.99
PTP4A1P1-201ENST00000420539 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
PTP4A1P1-201ENST00000420539 TMEM263Q8WUH6 116 aaKnown RBP2.61□□□□□ -1.99
PTP4A1P1-201ENST00000420539 DIP2AQ14689 1571 aa2.61□□□□□ -1.99
PTP4A1P1-201ENST00000420539 ZNF831Q5JPB2 1677 aa2.6□□□□□ -1.99
PTP4A1P1-201ENST00000420539 PRB2P02812 416 aaPredicted RBP2.6□□□□□ -1.99
PTP4A1P1-201ENST00000420539 IFI6P09912 130 aa2.6□□□□□ -1.99
PTP4A1P1-201ENST00000420539 HMGA1P17096 107 aaKnown RBP2.6□□□□□ -1.99
PTP4A1P1-201ENST00000420539 WIZO95785 1651 aa2.6□□□□□ -1.99
PTP4A1P1-201ENST00000420539 C10orf113Q5VZT2 155 aa2.59□□□□□ -1.99
PTP4A1P1-201ENST00000420539 C10orf99Q6UWK7 81 aa2.59□□□□□ -1.99
PTP4A1P1-201ENST00000420539 UNQ6190/PRO20217Q6UXQ8 127 aa2.59□□□□□ -1.99
PTP4A1P1-201ENST00000420539 FAM103A1Q9BTL3 118 aaKnown RBP2.59□□□□□ -1.99
PTP4A1P1-201ENST00000420539 USP32Q8NFA0 1604 aa2.59□□□□□ -1.99
PTP4A1P1-201ENST00000420539 UBR3Q6ZT12 1888 aa2.58□□□□□ -2
PTP4A1P1-201ENST00000420539 KRTAP10-1P60331 282 aa2.58□□□□□ -2
PTP4A1P1-201ENST00000420539 TIAM2Q8IVF5 1701 aa2.58□□□□□ -2
PTP4A1P1-201ENST00000420539 FANCD2Q9BXW9 1451 aa2.58□□□□□ -2
PTP4A1P1-201ENST00000420539 CICQ96RK0 1608 aaPredicted RBP2.57□□□□□ -2
PTP4A1P1-201ENST00000420539 E9PCH4 1651 aa2.57□□□□□ -2
PTP4A1P1-201ENST00000420539 NHSQ6T4R5 1651 aa2.57□□□□□ -2
PTP4A1P1-201ENST00000420539 J3QRE1 110 aa2.57□□□□□ -2
PTP4A1P1-201ENST00000420539 CACNA1GO43497 2377 aa2.57□□□□□ -2
PTP4A1P1-201ENST00000420539 ALS2Q96Q42 1657 aa2.57□□□□□ -2
PTP4A1P1-201ENST00000420539 PARP4Q9UKK3 1724 aaKnown RBP2.56□□□□□ -2
PTP4A1P1-201ENST00000420539 ABCA1O95477 2261 aa2.56□□□□□ -2
PTP4A1P1-201ENST00000420539 TRAV21A0A0B4J279 112 aa2.56□□□□□ -2
PTP4A1P1-201ENST00000420539 TRBV30A0A0K0K1B3 111 aa2.56□□□□□ -2
PTP4A1P1-201ENST00000420539 DEFB103AP81534 67 aa2.56□□□□□ -2
PTP4A1P1-201ENST00000420539 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.56□□□□□ -2
PTP4A1P1-201ENST00000420539 BRD3OSQ6XYD6 125 aa2.56□□□□□ -2
PTP4A1P1-201ENST00000420539 SAMD9Q5K651 1589 aa2.56□□□□□ -2
PTP4A1P1-201ENST00000420539 ZFHX3Q15911 3703 aa2.55□□□□□ -2
PTP4A1P1-201ENST00000420539 NDUFB1O75438 58 aa2.55□□□□□ -2
PTP4A1P1-201ENST00000420539 NESP48681 1621 aa2.55□□□□□ -2
PTP4A1P1-201ENST00000420539 CLASP1Q7Z460 1538 aa2.55□□□□□ -2
PTP4A1P1-201ENST00000420539 PAPPA2Q9BXP8 1791 aa2.54□□□□□ -2
PTP4A1P1-201ENST00000420539 A0A096LNT2 108 aa2.54□□□□□ -2
PTP4A1P1-201ENST00000420539 COL14A1Q05707 1796 aaKnown RBP2.54□□□□□ -2
PTP4A1P1-201ENST00000420539 LRRC37A2A6NM11 1700 aa2.54□□□□□ -2
PTP4A1P1-201ENST00000420539 MROH2AA6NES4 1674 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 CFAP43Q8NDM7 1665 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 ANKRD50Q9ULJ7 1429 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 GVQW2A0A096LPI5 108 aaPredicted RBP2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 G3V318 75 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 KRTAP13-3Q3SY46 172 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 Q6ZRX8 168 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 SMIM11BQ8TCY0 68 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 PLAC4Q8WY50 150 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 BCORQ6W2J9 1755 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 LAMC1P11047 1609 aa2.53□□□□□ -2
PTP4A1P1-201ENST00000420539 TSC2P49815 1807 aa2.52□□□□□ -2.01
PTP4A1P1-201ENST00000420539 A0A1B0GUL6 1792 aa2.52□□□□□ -2.01
PTP4A1P1-201ENST00000420539 NREPQ16612 68 aa2.52□□□□□ -2.01
PTP4A1P1-201ENST00000420539 COL4A4P53420 1690 aaPredicted RBP2.52□□□□□ -2.01
PTP4A1P1-201ENST00000420539 VWDEQ8N2E2 1590 aa2.52□□□□□ -2.01
PTP4A1P1-201ENST00000420539 MAST1Q9Y2H9 1570 aa2.52□□□□□ -2.01
PTP4A1P1-201ENST00000420539 EIF2AK4Q9P2K8 1649 aaKnown RBP2.51□□□□□ -2.01
PTP4A1P1-201ENST00000420539 WFDC9Q8NEX5 89 aa2.51□□□□□ -2.01
PTP4A1P1-201ENST00000420539 LRRC7Q96NW7 1537 aa2.51□□□□□ -2.01
PTP4A1P1-201ENST00000420539 F5P12259 2224 aa2.5□□□□□ -2.01
PTP4A1P1-201ENST00000420539 SSC5DA1L4H1 1573 aa2.5□□□□□ -2.01
PTP4A1P1-201ENST00000420539 TRBV6-1A0A0K0K1D8 114 aa2.5□□□□□ -2.01
PTP4A1P1-201ENST00000420539 LINC01549A6NIU2 74 aa2.5□□□□□ -2.01
PTP4A1P1-201ENST00000420539 NCR3O14931 201 aa2.5□□□□□ -2.01
PTP4A1P1-201ENST00000420539 DEFB112Q30KQ8 113 aa2.5□□□□□ -2.01
PTP4A1P1-201ENST00000420539 FXYD6Q9H0Q3 95 aa2.5□□□□□ -2.01
PTP4A1P1-201ENST00000420539 RICTORQ6R327 1708 aa2.5□□□□□ -2.01
PTP4A1P1-201ENST00000420539 A0A0D9SFI3 127 aa2.49□□□□□ -2.01
PTP4A1P1-201ENST00000420539 A0A1B0GU69 56 aa2.49□□□□□ -2.01
PTP4A1P1-201ENST00000420539 LY6G6CO95867 125 aa2.49□□□□□ -2.01
PTP4A1P1-201ENST00000420539 PCOTHQ58A44 107 aa2.49□□□□□ -2.01
PTP4A1P1-201ENST00000420539 LINC00575Q6W349 94 aa2.49□□□□□ -2.01
PTP4A1P1-201ENST00000420539 LCE6AA0A183 80 aa2.48□□□□□ -2.01
PTP4A1P1-201ENST00000420539 LINC00959A0A1B0GUT2 108 aa2.48□□□□□ -2.01
PTP4A1P1-201ENST00000420539 HAMPP81172 84 aa2.48□□□□□ -2.01
PTP4A1P1-201ENST00000420539 GAFA1Q96PS6 74 aa2.48□□□□□ -2.01
PTP4A1P1-201ENST00000420539 KMT2BQ9UMN6 2715 aaPredicted RBP2.48□□□□□ -2.01
PTP4A1P1-201ENST00000420539 CACNA1CQ13936 2221 aa2.48□□□□□ -2.01
PTP4A1P1-201ENST00000420539 TOP2AP11388 1531 aaKnown RBP2.47□□□□□ -2.01
PTP4A1P1-201ENST00000420539 SYCP2Q9BX26 1530 aa2.47□□□□□ -2.01
PTP4A1P1-201ENST00000420539 KIAA0556O60303 1618 aa2.47□□□□□ -2.01
PTP4A1P1-201ENST00000420539 SNRPGP15A8MWD9 76 aa2.47□□□□□ -2.01
PTP4A1P1-201ENST00000420539 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
PTP4A1P1-201ENST00000420539 ASCC3Q8N3C0 2202 aaKnown RBP2.46□□□□□ -2.01
PTP4A1P1-201ENST00000420539 FMN2Q9NZ56 1722 aa2.46□□□□□ -2.02
PTP4A1P1-201ENST00000420539 SPINK13Q1W4C9 94 aa2.46□□□□□ -2.02
PTP4A1P1-201ENST00000420539 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
PTP4A1P1-201ENST00000420539 BAHCC1Q9P281 2608 aa2.45□□□□□ -2.02
PTP4A1P1-201ENST00000420539 ABCC6O95255 1503 aa2.44□□□□□ -2.02
PTP4A1P1-201ENST00000420539 CPS1P31327 1500 aa2.44□□□□□ -2.02
PTP4A1P1-201ENST00000420539 PRB1P04280 392 aa2.44□□□□□ -2.02
PTP4A1P1-201ENST00000420539 POLR1AO95602 1720 aaPredicted RBP2.43□□□□□ -2.02
PTP4A1P1-201ENST00000420539 NRAPQ86VF7 1730 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms