RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 MRPL51Q4U2R6 128 aaKnown RBP5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 KRTAP13-2Q52LG2 175 aa5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 LINC00242Q5T6M2 205 aa5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 FAM104BQ5XKR9 115 aa5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 PACRGQ96M98 296 aaPredicted RBP5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 SMIM2Q9BVW6 85 aa5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 CDIP1Q9H305 208 aa5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 OSTCQ9NRP0 149 aa5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 C22orf24Q9Y442 160 aa5.93□□□□□ -1.46
TNFAIP3-202ENST00000420009 BCE1O60756 84 aa5.92□□□□□ -1.46
TNFAIP3-202ENST00000420009 APOC3P02656 99 aa5.92□□□□□ -1.46
TNFAIP3-202ENST00000420009 V9GYV3 84 aa5.92□□□□□ -1.46
TNFAIP3-202ENST00000420009 CEBPGP53567 150 aa5.91□□□□□ -1.46
TNFAIP3-202ENST00000420009 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
TNFAIP3-202ENST00000420009 LINC01561Q8N1V8 128 aa5.91□□□□□ -1.46
TNFAIP3-202ENST00000420009 SMIM7Q9BQ49 75 aa5.91□□□□□ -1.46
TNFAIP3-202ENST00000420009 TP73-AS1Q9UF72 201 aa5.91□□□□□ -1.46
TNFAIP3-202ENST00000420009 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.46
TNFAIP3-202ENST00000420009 ZNF727A8MUV8 499 aa5.9□□□□□ -1.46
TNFAIP3-202ENST00000420009 SCO1O75880 301 aa5.9□□□□□ -1.46
TNFAIP3-202ENST00000420009 TNFRSF6BO95407 300 aa5.9□□□□□ -1.46
TNFAIP3-202ENST00000420009 SVBPQ8N300 66 aa5.9□□□□□ -1.46
TNFAIP3-202ENST00000420009 LINC00469Q8N7U9 141 aa5.9□□□□□ -1.46
TNFAIP3-202ENST00000420009 XAGE1AQ9HD64 81 aa5.9□□□□□ -1.46
TNFAIP3-202ENST00000420009 ANAPC11Q9NYG5 84 aa5.9□□□□□ -1.46
TNFAIP3-202ENST00000420009 IGLV4-3A0A075B6K6 122 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 CKS2P33552 79 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 IFI27P40305 119 aaPredicted RBP5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 FAM229BQ4G0N7 80 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 FAM74A3Q4VXF1 159 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 MRPL55Q7Z7F7 128 aaKnown RBP5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 KRTAP13-1Q8IUC0 172 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 LINC00304Q8N9R0 145 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 NAT8Q9UHE5 227 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 NAT8BQ9UHF3 227 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 PYGO1Q9Y3Y4 419 aa5.89□□□□□ -1.47
TNFAIP3-202ENST00000420009 D6R8Y8 96 aa5.88□□□□□ -1.47
TNFAIP3-202ENST00000420009 SNAPINO95295 136 aa5.88□□□□□ -1.47
TNFAIP3-202ENST00000420009 NPYP01303 97 aa5.88□□□□□ -1.47
TNFAIP3-202ENST00000420009 RPL23P62829 140 aaKnown RBP5.88□□□□□ -1.47
TNFAIP3-202ENST00000420009 CTAG1AP78358 180 aa5.88□□□□□ -1.47
TNFAIP3-202ENST00000420009 LINC00173Q6ZV60 143 aa5.88□□□□□ -1.47
TNFAIP3-202ENST00000420009 TMEM141Q96I45 108 aa5.88□□□□□ -1.47
TNFAIP3-202ENST00000420009 Q8IZM0 81 aa5.87□□□□□ -1.47
TNFAIP3-202ENST00000420009 TMEM238LA0A1B0GVL6 79 aa5.86□□□□□ -1.47
TNFAIP3-202ENST00000420009 A0A1B0GW15 77 aa5.86□□□□□ -1.47
TNFAIP3-202ENST00000420009 SMIM27A0A1W2PRY6 76 aa5.86□□□□□ -1.47
TNFAIP3-202ENST00000420009 PRSS2P07478 247 aa5.86□□□□□ -1.47
TNFAIP3-202ENST00000420009 CKS1BP61024 79 aa5.86□□□□□ -1.47
TNFAIP3-202ENST00000420009 PNRC1Q12796 327 aaPredicted RBP5.86□□□□□ -1.47
TNFAIP3-202ENST00000420009 RHEBQ15382 184 aa5.86□□□□□ -1.47
TNFAIP3-202ENST00000420009 ADIRFQ15847 76 aa5.86□□□□□ -1.47
TNFAIP3-202ENST00000420009 RPL37AP8A6NKH3 93 aa5.85□□□□□ -1.47
TNFAIP3-202ENST00000420009 Q6ZN92 141 aa5.85□□□□□ -1.47
TNFAIP3-202ENST00000420009 TEX43Q6ZNM6 134 aa5.85□□□□□ -1.47
TNFAIP3-202ENST00000420009 LINC00167Q96N53 147 aa5.85□□□□□ -1.47
TNFAIP3-202ENST00000420009 TOMM7Q9P0U1 55 aa5.85□□□□□ -1.47
TNFAIP3-202ENST00000420009 A0A1B0GXF2 115 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 F8VRH5 84 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 PPBPP02775 128 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 RAB5AP20339 215 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 LINC01547P58512 204 aaPredicted RBP5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 C6orf226Q5I0X4 101 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 ZC2HC1BQ5TFG8 222 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 CBLN2Q8IUK8 224 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 AMELXQ99217 191 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 C2orf88Q9BSF0 95 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 ALKBH7Q9BT30 221 aaPredicted RBP5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 PPDPFQ9H3Y8 114 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 RPS10P5Q9NQ39 176 aa5.84□□□□□ -1.47
TNFAIP3-202ENST00000420009 IGLV5-37A0A075B6J1 123 aa5.83□□□□□ -1.48
TNFAIP3-202ENST00000420009 IGKV2D-26A0A0A0MRZ7 120 aa5.83□□□□□ -1.48
TNFAIP3-202ENST00000420009 UBE2AP49459 152 aa5.83□□□□□ -1.48
TNFAIP3-202ENST00000420009 FAM19A3Q7Z5A8 133 aa5.83□□□□□ -1.48
TNFAIP3-202ENST00000420009 YPEL4Q96NS1 127 aa5.83□□□□□ -1.48
TNFAIP3-202ENST00000420009 GAGE10A6NGK3 116 aa5.82□□□□□ -1.48
TNFAIP3-202ENST00000420009 H3BS24 57 aa5.82□□□□□ -1.48
TNFAIP3-202ENST00000420009 S100A8P05109 93 aa5.82□□□□□ -1.48
TNFAIP3-202ENST00000420009 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
TNFAIP3-202ENST00000420009 MRPL54Q6P161 138 aaKnown RBP5.82□□□□□ -1.48
TNFAIP3-202ENST00000420009 ORMDL3Q8N138 153 aa5.82□□□□□ -1.48
TNFAIP3-202ENST00000420009 NPSP0C0P6 89 aa5.81□□□□□ -1.48
TNFAIP3-202ENST00000420009 CXCL5P42830 114 aa5.81□□□□□ -1.48
TNFAIP3-202ENST00000420009 C2orf66Q6UXQ4 117 aa5.81□□□□□ -1.48
TNFAIP3-202ENST00000420009 FP248Q71RG6 208 aaPredicted RBP5.81□□□□□ -1.48
TNFAIP3-202ENST00000420009 ANAPC16Q96DE5 110 aa5.81□□□□□ -1.48
TNFAIP3-202ENST00000420009 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
TNFAIP3-202ENST00000420009 SMCO4Q9NRQ5 59 aa5.81□□□□□ -1.48
TNFAIP3-202ENST00000420009 CDKN2A-AS1Q9UH64 79 aa5.81□□□□□ -1.48
TNFAIP3-202ENST00000420009 PRSS47A8MTI9 375 aa5.8□□□□□ -1.48
TNFAIP3-202ENST00000420009 MT-ND4LP03901 98 aa5.8□□□□□ -1.48
TNFAIP3-202ENST00000420009 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
TNFAIP3-202ENST00000420009 TMEM136Q6ZRR5 245 aa5.8□□□□□ -1.48
TNFAIP3-202ENST00000420009 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
TNFAIP3-202ENST00000420009 VCX2Q9H322 139 aa5.8□□□□□ -1.48
TNFAIP3-202ENST00000420009 CYSLTR1Q9Y271 337 aa5.8□□□□□ -1.48
TNFAIP3-202ENST00000420009 IGIPA6NJ69 53 aa5.79□□□□□ -1.48
TNFAIP3-202ENST00000420009 COLCA2A8K830 154 aa5.79□□□□□ -1.48
TNFAIP3-202ENST00000420009 HERVK_113P63121 156 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms