RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SPINK8P0C7L1 97 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 CYSTM1Q9H1C7 97 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 LINC00474Q9P2X8 69 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 SNURFQ9Y675 71 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 WDR87Q6ZQQ6 2873 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 COL6A6A6NMZ7 2263 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 INTS1Q8N201 2190 aaKnown RBP1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 CHD9Q3L8U1 2897 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 DNAJC13O75165 2243 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 TNRC18O15417 2968 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 PI4KAP42356 2102 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 ZGRF1Q86YA3 2104 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 IGKV2-29A2NJV5 120 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 CRYM-AS1A6NIL9 109 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 ARL14EPLP0DKL9 152 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 IFITM1P13164 125 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 CBLN1P23435 193 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 CD52P31358 61 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 SPATA45Q537H7 98 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 COL5A1-AS1Q5SY13 56 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 CYP2G1PQ6ZSU1 146 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 GTF2H5Q6ZYL4 71 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 DEFB132Q7Z7B7 95 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 TSLPQ969D9 159 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 COX14Q96I36 57 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 AMELYQ99218 206 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 DPH3P1Q9H4G8 78 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 R4GMQ9 66 aa1.09□□□□□ -2.23
HMGB1P49-201ENST00000418882 KALRNO60229 2985 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 VPS13AQ96RL7 3174 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 VCANP13611 3396 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 IGLV3-32A0A0A0MS00 114 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 IGKV3D-7A0A0C4DH55 119 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 IGKV3OR2-268A0A0C4DH90 116 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 HCG22E2RYF7 251 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 PRH1P02810 166 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 IGLC2P0DOY2 106 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 IGLC3P0DOY3 106 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 SERF2P84101 59 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 Q0VG73 95 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 FXYD3Q14802 87 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 TDRG1Q3Y452 100 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 NMSQ5H8A3 153 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 FAM213BQ8TBF2 198 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 LINC00208Q96KT6 92 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 TTTY10Q9BZA0 68 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 FAM186AA6NE01 2351 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 ABCA1O95477 2261 aa1.08□□□□□ -2.24
HMGB1P49-201ENST00000418882 CACNA1EQ15878 2313 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 DSPP15924 2871 aaKnown RBP1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 SPEGQ15772 3267 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 MGAQ8IWI9 3026 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 PIGBOS1A0A0B4J2F0 54 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 IGLC7A0M8Q6 106 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 RBAKDNA6NC62 111 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 FAM24AA6NFZ4 105 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 HIGD1CA8MV81 97 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 RPS27P42677 84 aaKnown RBP1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 S100A10P60903 97 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 C5orf38Q86SI9 138 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 C5orf56Q8N8D9 126 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 ARHGAP5-AS1Q96IT6 56 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 VAMP8Q9BV40 100 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 SPANXDQ9BXN6 97 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 MANBALQ9NQG1 85 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 UQCR10Q9UDW1 63 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 PRUNE2Q8WUY3 3088 aa1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 PRRC2CQ9Y520 2896 aaKnown RBP1.07□□□□□ -2.24
HMGB1P49-201ENST00000418882 URB1O60287 2271 aaKnown RBP1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 SZT2Q5T011 3432 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 CFAP47Q6ZTR5 3102 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 FREM2Q5SZK8 3169 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 KIAA0100Q14667 2235 aaKnown RBP1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 A0A087WTM6 91 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 CTXND1A0A1B0GTU2 59 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 H0YGG7 62 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 H3BSH0 61 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 C3orf79P0CE67 100 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 IGLC1P0CG04 106 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 UBE2D1P51668 147 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 ADIRFQ15847 76 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 PMCHL1Q16048 86 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 NDUFA11Q86Y39 141 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 TTC9CQ8N5M4 171 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 DEFB119Q8N690 84 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 BET1LQ9NYM9 111 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 GNG13Q9P2W3 67 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 CACNA1BQ00975 2339 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 NAV3Q8IVL0 2385 aa1.06□□□□□ -2.24
HMGB1P49-201ENST00000418882 CELSR3Q9NYQ7 3312 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 CDH23Q9H251 3354 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 TRBV10-3A0A0K0K1G6 114 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 TEX49A0A1B0GTD5 131 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 SMIM27A0A1W2PRY6 76 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 CEBPZOSA8MTT3 80 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 C10orf142B7Z368 130 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 ZZEF1O43149 2961 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 SSSCA1O60232 199 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 GYPAP02724 150 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms