RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 Q6ZQY7 126 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 TIAM2Q8IVF5 1701 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 ZNF625Q96I27 306 aaPredicted RBP1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 CEP192Q8TEP8 1941 aa1.7□□□□□ -2.14
CTDSPL-203ENST00000416688 UBR3Q6ZT12 1888 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 COL4A2P08572 1712 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 PARP4Q9UKK3 1724 aaKnown RBP1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 SAMD9Q5K651 1589 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 COL5A1P20908 1838 aaPredicted RBP1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 TRGV2A0A075B6R0 118 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 TRGV1A0A0A0MS02 117 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 LCE6AA0A183 80 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 KRTAP13-2Q52LG2 175 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 LINC00304Q8N9R0 145 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 Q96NJ1 140 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 GAFA1Q96PS6 74 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 COL4A1P02462 1669 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 AGLP35573 1532 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 TET1Q8NFU7 2136 aa1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 POLR1AO95602 1720 aaPredicted RBP1.69□□□□□ -2.14
CTDSPL-203ENST00000416688 ZFHX3Q15911 3703 aa1.68□□□□□ -2.14
CTDSPL-203ENST00000416688 COL14A1Q05707 1796 aaKnown RBP1.68□□□□□ -2.14
CTDSPL-203ENST00000416688 ANKRD36CQ5JPF3 1778 aa1.68□□□□□ -2.14
CTDSPL-203ENST00000416688 J3QRE1 110 aa1.68□□□□□ -2.14
CTDSPL-203ENST00000416688 DEFB112Q30KQ8 113 aa1.68□□□□□ -2.14
CTDSPL-203ENST00000416688 ABRACLQ9P1F3 81 aa1.68□□□□□ -2.14
CTDSPL-203ENST00000416688 FMN2Q9NZ56 1722 aa1.68□□□□□ -2.14
CTDSPL-203ENST00000416688 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
CTDSPL-203ENST00000416688 DNAJC13O75165 2243 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 RTTNQ86VV8 2226 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 PCDH15Q96QU1 1955 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 ALPK2Q86TB3 2170 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 HCRTO43612 131 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 KRTAP1-4P0C5Y4 121 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 PLNP26678 52 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 SPINK7P58062 85 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 KRTAP10-11P60412 298 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 IGFL1Q6UW32 110 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 ENHOQ6UWT2 76 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 BCORQ6W2J9 1755 aa1.67□□□□□ -2.14
CTDSPL-203ENST00000416688 INTS1Q8N201 2190 aaKnown RBP1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 TRPM2O94759 1503 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 TJP1Q07157 1748 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 ZNF236Q9UL36 1845 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 NCR3O14931 201 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 CCL19Q99731 98 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 LINC00472Q9H8W2 130 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 ABCC8Q09428 1581 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 NWD1Q149M9 1564 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 FAM208AQ9UK61 1670 aaKnown RBP1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 LRRC37A2A6NM11 1700 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 CDC42BPAQ5VT25 1732 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 NFAT5O94916 1531 aa1.66□□□□□ -2.14
CTDSPL-203ENST00000416688 A0A1B0GU69 56 aa1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 RPL38P63173 70 aaKnown RBP1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 C10orf99Q6UWK7 81 aa1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 SMIM11BQ8TCY0 68 aa1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 ZCCHC13Q8WW36 166 aaKnown RBP1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 OBSCN-AS1Q96MR7 158 aa1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 LY75O60449 1722 aa1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 NRXN3Q9Y4C0 1643 aa1.65□□□□□ -2.15
CTDSPL-203ENST00000416688 KMT2BQ9UMN6 2715 aaPredicted RBP1.64□□□□□ -2.15
CTDSPL-203ENST00000416688 K7EMI3 77 aa1.64□□□□□ -2.15
CTDSPL-203ENST00000416688 PIN1P1O15428 100 aa1.64□□□□□ -2.15
CTDSPL-203ENST00000416688 LCE1AQ5T7P2 110 aa1.64□□□□□ -2.15
CTDSPL-203ENST00000416688 SDK1Q7Z5N4 2213 aa1.63□□□□□ -2.15
CTDSPL-203ENST00000416688 NDUFA4O00483 81 aa1.63□□□□□ -2.15
CTDSPL-203ENST00000416688 DEFB114Q30KQ6 69 aa1.63□□□□□ -2.15
CTDSPL-203ENST00000416688 GPR179Q6PRD1 2367 aa1.63□□□□□ -2.15
CTDSPL-203ENST00000416688 SMIM27A0A1W2PRY6 76 aa1.62□□□□□ -2.15
CTDSPL-203ENST00000416688 COX7BP24311 80 aa1.62□□□□□ -2.15
CTDSPL-203ENST00000416688 SPINK13Q1W4C9 94 aa1.62□□□□□ -2.15
CTDSPL-203ENST00000416688 Q6ZRN7 208 aaPredicted RBP1.62□□□□□ -2.15
CTDSPL-203ENST00000416688 PLAC4Q8WY50 150 aa1.62□□□□□ -2.15
CTDSPL-203ENST00000416688 PAPPA2Q9BXP8 1791 aa1.62□□□□□ -2.15
CTDSPL-203ENST00000416688 ZNF831Q5JPB2 1677 aa1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 FREM1Q5H8C1 2179 aa1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 NRAPQ86VF7 1730 aa1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 KRTAP10-9P60411 292 aa1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 HAMPP81172 84 aa1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 Q6ZRX8 168 aa1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 PRRC2AP48634 2157 aaKnown RBP1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 SLIT1O75093 1534 aa1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 TULP4Q9NRJ4 1543 aa1.61□□□□□ -2.15
CTDSPL-203ENST00000416688 NCOA6Q14686 2063 aaPredicted RBP1.6□□□□□ -2.15
CTDSPL-203ENST00000416688 ADAMTS9Q9P2N4 1935 aa1.6□□□□□ -2.15
CTDSPL-203ENST00000416688 SHANK1Q9Y566 2161 aa1.6□□□□□ -2.15
CTDSPL-203ENST00000416688 LINC00959A0A1B0GUT2 108 aa1.6□□□□□ -2.15
CTDSPL-203ENST00000416688 MRPL33O75394 65 aaKnown RBP1.6□□□□□ -2.15
CTDSPL-203ENST00000416688 LINC00575Q6W349 94 aa1.6□□□□□ -2.15
CTDSPL-203ENST00000416688 FN1P02751 2386 aaKnown RBP1.6□□□□□ -2.15
CTDSPL-203ENST00000416688 A0A0G2JMZ2 1700 aa1.6□□□□□ -2.15
CTDSPL-203ENST00000416688 A0A096LNT2 108 aa1.59□□□□□ -2.15
CTDSPL-203ENST00000416688 M0R1W7 72 aa1.59□□□□□ -2.15
CTDSPL-203ENST00000416688 GAS8-AS1O95177 125 aa1.59□□□□□ -2.15
CTDSPL-203ENST00000416688 DOT1LQ8TEK3 1739 aa1.59□□□□□ -2.16
CTDSPL-203ENST00000416688 ATP7AQ04656 1500 aa1.58□□□□□ -2.16
CTDSPL-203ENST00000416688 GVQW2A0A096LPI5 108 aaPredicted RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms