RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 FAM240AA0A1B0GVK7 77 aa9.38□□□□□ -0.91
SCN1B-202ENST00000415950 LINC00694P0DN24 101 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 C9orf85Q96MD7 179 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 Q6YL49 198 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 NDUFC2-KCTD14E9PQ53 114 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 ATP5EP2Q5VTU8 51 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 TRBV6-4A0A1B0GX49 114 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 COX6A2Q02221 97 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 MAST4O15021 2626 aa9.37□□□□□ -0.91
SCN1B-202ENST00000415950 FAM19A3Q7Z5A8 133 aa9.36□□□□□ -0.91
SCN1B-202ENST00000415950 HRCT1Q6UXD1 115 aa9.36□□□□□ -0.91
SCN1B-202ENST00000415950 COX8CQ7Z4L0 72 aa9.36□□□□□ -0.91
SCN1B-202ENST00000415950 CELA1Q9UNI1 258 aa9.36□□□□□ -0.91
SCN1B-202ENST00000415950 ZZEF1O43149 2961 aa9.36□□□□□ -0.91
SCN1B-202ENST00000415950 DEFB131BA0A096LNP1 70 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 Q6ZSN1 163 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 MRPS36P82909 103 aaKnown RBP9.35□□□□□ -0.91
SCN1B-202ENST00000415950 IMUPQ9GZP8 106 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 IGHV4-31P0DP07 118 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 PRR3P79522 188 aaKnown RBP9.35□□□□□ -0.91
SCN1B-202ENST00000415950 SYCNQ0VAF6 134 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 Q6Q795 121 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 LINC00959A0A1B0GUT2 108 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 TIMM17BO60830 172 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 LINC00242Q5T6M2 205 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 PRO0461Q9UI25 63 aa9.35□□□□□ -0.91
SCN1B-202ENST00000415950 M0QXV9 152 aa9.34□□□□□ -0.91
SCN1B-202ENST00000415950 ATMQ13315 3056 aa9.34□□□□□ -0.91
SCN1B-202ENST00000415950 SPINK6Q6UWN8 80 aa9.34□□□□□ -0.91
SCN1B-202ENST00000415950 B9D2Q9BPU9 175 aa9.33□□□□□ -0.92
SCN1B-202ENST00000415950 RPL37AP8A6NKH3 93 aa9.33□□□□□ -0.92
SCN1B-202ENST00000415950 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
SCN1B-202ENST00000415950 MRPL55Q7Z7F7 128 aaKnown RBP9.33□□□□□ -0.92
SCN1B-202ENST00000415950 LYRM9A8MSI8 78 aa9.33□□□□□ -0.92
SCN1B-202ENST00000415950 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
SCN1B-202ENST00000415950 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
SCN1B-202ENST00000415950 PLA2G2AP14555 144 aa9.31□□□□□ -0.92
SCN1B-202ENST00000415950 CDC42SE2Q9NRR3 84 aa9.31□□□□□ -0.92
SCN1B-202ENST00000415950 PCSK5Q92824 1860 aa9.31□□□□□ -0.92
SCN1B-202ENST00000415950 IGLV1-40P01703 118 aa9.31□□□□□ -0.92
SCN1B-202ENST00000415950 ASH1LQ9NR48 2969 aaKnown RBP9.31□□□□□ -0.92
SCN1B-202ENST00000415950 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
SCN1B-202ENST00000415950 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
SCN1B-202ENST00000415950 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
SCN1B-202ENST00000415950 KIF25-AS1Q9Y6Z4 181 aa9.3□□□□□ -0.92
SCN1B-202ENST00000415950 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
SCN1B-202ENST00000415950 NTM-AS1Q6ZSK4 140 aa9.3□□□□□ -0.92
SCN1B-202ENST00000415950 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
SCN1B-202ENST00000415950 NANOS2P60321 138 aaKnown RBP9.29□□□□□ -0.92
SCN1B-202ENST00000415950 INAFM1C9JVW0 142 aa9.29□□□□□ -0.92
SCN1B-202ENST00000415950 SEC61GP60059 68 aa9.29□□□□□ -0.92
SCN1B-202ENST00000415950 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
SCN1B-202ENST00000415950 A6NED7 52 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 LRRC75A-AS1Q8N1F1 130 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 ZNF702PQ9H963 129 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 ZNF292O60281 2723 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 CYSRT1A8MQ03 144 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 LINC00315P59091 139 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 V9GYY9 64 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 WDFY3Q8IZQ1 3526 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 IGHV4-30-4P0DP06 118 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 Q8N2B8 174 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 CHCHD7Q9BUK0 85 aa9.28□□□□□ -0.92
SCN1B-202ENST00000415950 LOC400499M0QZD8 3231 aa9.27□□□□□ -0.92
SCN1B-202ENST00000415950 ZNF73O43830 326 aaPredicted RBP9.27□□□□□ -0.92
SCN1B-202ENST00000415950 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.27□□□□□ -0.92
SCN1B-202ENST00000415950 LINC01006Q8NI28 216 aa9.26□□□□□ -0.93
SCN1B-202ENST00000415950 KPRPQ5T749 579 aaPredicted RBP9.26□□□□□ -0.93
SCN1B-202ENST00000415950 A0A087WYN8 130 aa9.26□□□□□ -0.93
SCN1B-202ENST00000415950 SHISA2Q6UWI4 295 aa9.26□□□□□ -0.93
SCN1B-202ENST00000415950 IGLV4-60A0A075B6I1 120 aa9.26□□□□□ -0.93
SCN1B-202ENST00000415950 ODF3L2Q3SX64 289 aa9.25□□□□□ -0.93
SCN1B-202ENST00000415950 Q6JHZ5 121 aa9.25□□□□□ -0.93
SCN1B-202ENST00000415950 COL4A2P08572 1712 aa9.25□□□□□ -0.93
SCN1B-202ENST00000415950 FLNAP21333 2647 aaKnown RBP9.24□□□□□ -0.93
SCN1B-202ENST00000415950 M0R378 163 aa9.24□□□□□ -0.93
SCN1B-202ENST00000415950 A8MTW9 85 aa9.24□□□□□ -0.93
SCN1B-202ENST00000415950 MIFP14174 115 aa9.24□□□□□ -0.93
SCN1B-202ENST00000415950 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
SCN1B-202ENST00000415950 FHL3Q13643 280 aa9.24□□□□□ -0.93
SCN1B-202ENST00000415950 AMELXQ99217 191 aa9.24□□□□□ -0.93
SCN1B-202ENST00000415950 NDUFC1O43677 76 aa9.23□□□□□ -0.93
SCN1B-202ENST00000415950 NBEAL2Q6ZNJ1 2754 aa9.23□□□□□ -0.93
SCN1B-202ENST00000415950 PRORYQ9H606 182 aa9.23□□□□□ -0.93
SCN1B-202ENST00000415950 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
SCN1B-202ENST00000415950 HILS1P60008 231 aa9.21□□□□□ -0.93
SCN1B-202ENST00000415950 SMIM26A0A096LP01 95 aa9.21□□□□□ -0.93
SCN1B-202ENST00000415950 M0R2N4 97 aa9.21□□□□□ -0.94
SCN1B-202ENST00000415950 C1orf195Q5TG92 126 aa9.21□□□□□ -0.94
SCN1B-202ENST00000415950 Q8IZM0 81 aa9.21□□□□□ -0.94
SCN1B-202ENST00000415950 Q8N3U1 123 aa9.21□□□□□ -0.94
SCN1B-202ENST00000415950 Q8N9L7 120 aa9.21□□□□□ -0.94
SCN1B-202ENST00000415950 ITPR3Q14573 2671 aa9.2□□□□□ -0.94
SCN1B-202ENST00000415950 LRBAP50851 2863 aa9.2□□□□□ -0.94
SCN1B-202ENST00000415950 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
SCN1B-202ENST00000415950 LELP1Q5T871 98 aa9.2□□□□□ -0.94
SCN1B-202ENST00000415950 Q8N814 137 aa9.2□□□□□ -0.94
SCN1B-202ENST00000415950 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms