RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ALKBH7Q9BT30 221 aaPredicted RBP8.95□□□□□ -0.98
DDX56-202ENST00000415758 VCX2Q9H322 139 aa8.95□□□□□ -0.98
DDX56-202ENST00000415758 C9JQL5 133 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 F8VRH5 84 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 FAM229BQ4G0N7 80 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 ZC2HC1BQ5TFG8 222 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 KRTAP13-1Q8IUC0 172 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 LINC00167Q96N53 147 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 ANAPC11Q9NYG5 84 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 CYSLTR1Q9Y271 337 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 LAMTOR2Q9Y2Q5 125 aa8.94□□□□□ -0.98
DDX56-202ENST00000415758 ATP5L2Q7Z4Y8 100 aa8.93□□□□□ -0.98
DDX56-202ENST00000415758 RETNLBQ9BQ08 111 aa8.93□□□□□ -0.98
DDX56-202ENST00000415758 CDIP1Q9H305 208 aa8.93□□□□□ -0.98
DDX56-202ENST00000415758 IGIPA6NJ69 53 aa8.92□□□□□ -0.98
DDX56-202ENST00000415758 LINC00304Q8N9R0 145 aa8.92□□□□□ -0.98
DDX56-202ENST00000415758 RPL37AP8A6NKH3 93 aa8.91□□□□□ -0.98
DDX56-202ENST00000415758 CXCL5P42830 114 aa8.91□□□□□ -0.98
DDX56-202ENST00000415758 HERVK_113P63121 156 aa8.91□□□□□ -0.98
DDX56-202ENST00000415758 SEC11AP67812 179 aa8.91□□□□□ -0.98
DDX56-202ENST00000415758 AKAP14Q86UN6 197 aa8.91□□□□□ -0.98
DDX56-202ENST00000415758 Q8N8P6 123 aa8.91□□□□□ -0.98
DDX56-202ENST00000415758 CDKN2A-AS1Q9UH64 79 aa8.91□□□□□ -0.98
DDX56-202ENST00000415758 IGLV7-46A0A075B6I9 117 aa8.9□□□□□ -0.98
DDX56-202ENST00000415758 LOC389332A0A1B0GUA5 103 aa8.9□□□□□ -0.98
DDX56-202ENST00000415758 MAP1LC3AQ9H492 121 aa8.9□□□□□ -0.98
DDX56-202ENST00000415758 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
DDX56-202ENST00000415758 K7EMI3 77 aa8.89□□□□□ -0.99
DDX56-202ENST00000415758 ORMDL2Q53FV1 153 aa8.89□□□□□ -0.99
DDX56-202ENST00000415758 SRSF3P84103 164 aaKnown RBP8.88□□□□□ -0.99
DDX56-202ENST00000415758 UBE2AP49459 152 aa8.87□□□□□ -0.99
DDX56-202ENST00000415758 PEA15Q15121 130 aa8.87□□□□□ -0.99
DDX56-202ENST00000415758 PAPPA-AS1Q5QFB9 102 aa8.87□□□□□ -0.99
DDX56-202ENST00000415758 GEMIN7Q9H840 131 aaKnown RBP8.87□□□□□ -0.99
DDX56-202ENST00000415758 GAGE10A6NGK3 116 aa8.86□□□□□ -0.99
DDX56-202ENST00000415758 IGKV2D-26A0A0A0MRZ7 120 aa8.85□□□□□ -0.99
DDX56-202ENST00000415758 PNRC1Q12796 327 aaPredicted RBP8.85□□□□□ -0.99
DDX56-202ENST00000415758 TIMM17AQ99595 171 aa8.85□□□□□ -0.99
DDX56-202ENST00000415758 SMIM1B2RUZ4 78 aa8.84□□□□□ -0.99
DDX56-202ENST00000415758 PDZD11Q5EBL8 140 aa8.84□□□□□ -0.99
DDX56-202ENST00000415758 G0S2P27469 103 aa8.83□□□□□ -1
DDX56-202ENST00000415758 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
DDX56-202ENST00000415758 PPDPFQ9H3Y8 114 aa8.83□□□□□ -1
DDX56-202ENST00000415758 COX7B2Q8TF08 81 aa8.82□□□□□ -1
DDX56-202ENST00000415758 NXT2Q9NPJ8 142 aaKnown RBP8.82□□□□□ -1
DDX56-202ENST00000415758 IGLV5-45A0A087WSX0 123 aa8.81□□□□□ -1
DDX56-202ENST00000415758 TOMM6Q96B49 74 aa8.81□□□□□ -1
DDX56-202ENST00000415758 IGKV2-28A0A075B6P5 120 aa8.8□□□□□ -1
DDX56-202ENST00000415758 TINCRA0A1B0GVN0 87 aa8.8□□□□□ -1
DDX56-202ENST00000415758 IGKV2D-28P01615 120 aa8.8□□□□□ -1
DDX56-202ENST00000415758 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
DDX56-202ENST00000415758 RAB5BP61020 215 aa8.79□□□□□ -1
DDX56-202ENST00000415758 ERASQ7Z444 233 aa8.79□□□□□ -1
DDX56-202ENST00000415758 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
DDX56-202ENST00000415758 PRLHP81277 87 aa8.78□□□□□ -1
DDX56-202ENST00000415758 SPAG11AQ6PDA7 123 aa8.78□□□□□ -1
DDX56-202ENST00000415758 FP248Q71RG6 208 aaPredicted RBP8.78□□□□□ -1
DDX56-202ENST00000415758 TMEM126AQ9H061 195 aa8.78□□□□□ -1
DDX56-202ENST00000415758 FSIP2Q5CZC0 6907 aa8.77□□□□□ -1
DDX56-202ENST00000415758 SCO1O75880 301 aa8.77□□□□□ -1.01
DDX56-202ENST00000415758 FAM19A1Q7Z5A9 133 aa8.77□□□□□ -1.01
DDX56-202ENST00000415758 hCG_2014768A0A024R1R8 64 aa8.76□□□□□ -1.01
DDX56-202ENST00000415758 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
DDX56-202ENST00000415758 C3orf22Q8N5N4 141 aa8.76□□□□□ -1.01
DDX56-202ENST00000415758 VPREB1P12018 145 aa8.75□□□□□ -1.01
DDX56-202ENST00000415758 ANAPC16Q96DE5 110 aa8.75□□□□□ -1.01
DDX56-202ENST00000415758 SCGB3A1Q96QR1 104 aa8.75□□□□□ -1.01
DDX56-202ENST00000415758 GNB1LQ9BYB4 327 aa8.75□□□□□ -1.01
DDX56-202ENST00000415758 TMEM238C9JI98 176 aa8.74□□□□□ -1.01
DDX56-202ENST00000415758 M0R378 163 aa8.74□□□□□ -1.01
DDX56-202ENST00000415758 ATP5LO75964 103 aa8.74□□□□□ -1.01
DDX56-202ENST00000415758 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
DDX56-202ENST00000415758 ADCYAP1P18509 176 aa8.74□□□□□ -1.01
DDX56-202ENST00000415758 LINC01547P58512 204 aaPredicted RBP8.74□□□□□ -1.01
DDX56-202ENST00000415758 KRTAP13-3Q3SY46 172 aa8.74□□□□□ -1.01
DDX56-202ENST00000415758 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
DDX56-202ENST00000415758 LINC01549A6NIU2 74 aa8.73□□□□□ -1.01
DDX56-202ENST00000415758 MT-ND4LP03901 98 aa8.73□□□□□ -1.01
DDX56-202ENST00000415758 LINC00337Q8N6G1 96 aa8.73□□□□□ -1.01
DDX56-202ENST00000415758 CST9LQ9H4G1 147 aa8.73□□□□□ -1.01
DDX56-202ENST00000415758 CBLN2Q8IUK8 224 aa8.72□□□□□ -1.01
DDX56-202ENST00000415758 PFN2P35080 140 aa8.71□□□□□ -1.02
DDX56-202ENST00000415758 RPL24P83731 157 aaKnown RBP8.71□□□□□ -1.02
DDX56-202ENST00000415758 SND1-IT1Q9HBX3 110 aa8.71□□□□□ -1.02
DDX56-202ENST00000415758 LINC01546A6NGU7 62 aa8.7□□□□□ -1.02
DDX56-202ENST00000415758 COX17Q14061 63 aa8.7□□□□□ -1.02
DDX56-202ENST00000415758 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
DDX56-202ENST00000415758 IGLV5-39A0A0G2JS06 123 aa8.69□□□□□ -1.02
DDX56-202ENST00000415758 H3BRM9 83 aa8.69□□□□□ -1.02
DDX56-202ENST00000415758 PMVKQ15126 192 aa8.69□□□□□ -1.02
DDX56-202ENST00000415758 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
DDX56-202ENST00000415758 SPRR4Q96PI1 79 aa8.69□□□□□ -1.02
DDX56-202ENST00000415758 CRCT1Q9UGL9 99 aa8.69□□□□□ -1.02
DDX56-202ENST00000415758 KIAA1644Q3SXP7 199 aa8.68□□□□□ -1.02
DDX56-202ENST00000415758 Q8NDZ9 215 aa8.68□□□□□ -1.02
DDX56-202ENST00000415758 HIGD2AQ9BW72 106 aa8.68□□□□□ -1.02
DDX56-202ENST00000415758 ERG28Q9UKR5 140 aa8.68□□□□□ -1.02
DDX56-202ENST00000415758 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
DDX56-202ENST00000415758 RAB14P61106 215 aa8.66□□□□□ -1.02
DDX56-202ENST00000415758 SPINK1P00995 79 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 251.5 ms